Effect of polyploidisation on the response of apple (Malus × domestica Borkh.) to Venturia inaequalis infection

European Journal of Plant Pathology

Volumn 151, Issue 2, 2018, Pages 515-526

  Hias, Niek ^a   Svara, Anze ^a   Keulemans, Johan Wannes ^a  

^a UNIVERSITY OF LEUVEN   (Belgium)

Author keywords

Apple scab; Malus domestica; Non model fruit crop; Polyploidy; Resistance; Venturia inaequalis

Indexed keywords

DECIDUOUS TREE; DISEASE RESISTANCE; ENVIRONMENTAL FACTOR; FRUIT; FUNGAL DISEASE; GENOME; GENOTYPE; INFECTIOUS DISEASE; POLYPLOIDY; SYMPTOM;

LONCHOCARPUS CAPASSA; MALUS X DOMESTICA; VENTURIA INAEQUALIS;

EID: 85041895086     PISSN: 09291873     EISSN: 15738469     Source Type: Journal    
DOI: 10.1007/s10658-017-1395-2     Document Type: Article

References (47)

1. Allario, T., Brumos, J., Colmenero-Flores, J. M., Iglesias, D. J., Pina, J. A., Navarro, L., et al. (2013). Tetraploid Rangpur lime rootstock increases drought tolerance via enhanced constitutive root abscisic acid production. Plant, Cell & Environment, 36(4), 856–868.
2. Allario, T., Brumos, J., Colmenero-Flores, J. M., Tadeo, F., Froelicher, Y., Talon, M., et al. (2011). Large changes in anatomy and physiology between diploid Rangpur lime (Citrus limonia) and its autotetraploid are not associated with large changes in leaf gene expression. Journal of Experimental Botany, 62(8), 2507–2519.
3. Belfanti, E., Silfverberg-Dilworth, E., Tartarini, S., Patocchi, A., Barbieri, M., Zhu, J., et al. (2004). The HcrVf2 gene from a wild apple confers scab resistance to a transgenic cultivated variety. Proceedings of the National Academy of Sciences of the United States of America, 101(3), 886–890.
4. Bowen, J. K., Mesarich, C. H., Bus, V. G. M., Beresford, R. M., Plummer, K. M., & Templeton, M. D. (2011). Venturia inaequalis: The causal agent of apple scab. Molecular Plant Pathology, 12(2), 105–122.
5. Burdon, J. J., & Marshall, D. R. (1981). Inter- and intra-specific diversity in the disease-response of Glycine species to the leaf-rust fungus Phakopsora pachyrhizi. Journal of Ecology, 69(2), 381–390.
6. Bus, V. G. M., Rikkerink, E. H. A., Caffier, V., Durel, C.-E., & Plummer, K. M. (2011). Revision of the nomenclature of the differential host-pathogen interactions of Venturia inaequalis and Malus. Annual Review of Phytopathology, 49, 391–413.
7. Chapman, K. S., Sundin, G. W., & Beckerman, J. L. (2011). Identification of resistance to multiple fungicides in field populations of Venturia inaequalis. Plant Disease, 95(8), 921–926.
8. Coate, J. E., & Doyle, J. J. (2010). Quantifying whole transcriptome size, a prerequisite for an example from a plant allopolyploid. Genome Biology and Evolution, 2, 534–546.
9. Croxall, H. E., Gwynne, D. C., & Jenkins, J. E. E. (1952). The rapid assessment of apple scab on fruit. Plant Pathology, 1(3), 89–92.
10. Daniëls, B., De Landtsheer, A., Dreesen, R., Davey, M. W., & Keulemans, J. (2012). Real-time PCR as a promising tool to monitor growth of Venturia spp. in scab-susceptible and -resistant apple leaves. European Journal of Plant Pathology, 134(4), 821–833.
11. De Godoy, L. M., Olsen, J. V., Cox, J., Nielsen, M. L., Hubner, N. C., Fröhlich, F., Walther, T. C., & Mann, M. (2008). Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature, 455(7217), 1251–1254.
12. del Pozo, J. C., & Ramirez-Parra, E. (2015). Whole genome duplications in plants: An overview from Arabidopsis. Journal of Experimental Botany, 66(22), 6991–7003.
13. Dewdney, M., Charest, J., Paulitz, T., & Carisse, O. (2003). Multivariate analysis of apple cultivar susceptibility to Venturia inaequalis under greenhouse conditions. Canadian Journal of Plant Pathology, 25(4), 387–400.
14. Dhooghe, E., Denis, S., Eeckhaut, T., Reheul, D., & Van Labeke, M. C. (2009). In vitro induction of tetraploids in ornamental Ranunculus. Euphytica, 168(1), 33–40.
15. Didelot, F., Caffier, V., Orain, G., Lemarquand, A., & Parisi, L. (2016). Sustainable management of scab control through the integration of apple resistant cultivars in a low-fungicide input system. Agriculture, Ecosystems and Environment, 217, 41–48.
16. Gessler, C., Patocchi, A., Sansavini, S., Tartarini, S., & Gianfranceschi, L. (2006). Venturia inaequalis resistance in apple. Critical Reviews in Plant Sciences, 25(6), 473–503.
17. Gessler, C., & Pertot, I. (2012). Vf scab resistance of Malus. Trees, 26(1), 95–108.
18. Gusberti, M., Gessler, C., & Broggini, G. A. L. (2013). RNA-seq analysis reveals candidate genes for ontogenic resistance in Malus-Venturia pathosystem. PLoS One, 8(11), e78457.
19. Hias, N., Leus, L., Davey, M. W. M. W., Vanderzande, S., Van Huylenbroeck, J., Keulemans, J., et al. (2017). Effect of polyploidization on morphology in two apple (Malus x domestica) genotypes. Horticultural Science, 44, 55–63.
20. Hildebrand, P. D., Lockhart, C. L., Newbery, R. J., & Ross, R. G. (1988). Resistance of Venturia inaequalis to bitertanol and other demethylation-inhibiting fungicides. Canadian Journal of Plant Pathology, 10(4), 311–316.
21. Holb, I. J. (2007). Classification of apple cultivar reactions to scab in integrated and organic production systems. Canadian Journal of Plant Pathology, 29(3), 251–260.
22. Holb, I. J. (2008). Timing of first and final sprays against apple scab combined with leaf removal and pruning in organic apple production. Crop Protection, 27(3–5), 814–822.
23. Holb, I. J. (2009). Fungal disease Management in Environmentally Friendly Apple Production – A review. In E. Lichtfouse (Ed), Climate Change, Intercropping, Pest Control and Beneficial Microorganisms. Sustainable Agriculture Reviews (vol 2, pp 219-292). Dordrecht: Springer.
24. Innes, R. W., Ameline-Torregrosa, C., Ashfield, T., Cannon, E., Cannon, S. B., Chacko, B., et al. (2008). Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean. Plant Physiology, 148(4), 1740–1759.
25. Juhásová, G., Ivanová, H., Adamciková, K., Kobza, M., & Čerevková, A. (2004). Scab disease of firethorn at selected localities in Slovakia. Plant Protection Science, 40(2), 42–48.
26. King, K. C., Seppala, O., & Neiman, M. (2012). Is more better? Polyploidy and parasite resistance. Biology Letters, 8(4), 598–600.
27. Lian, S., Li, B. H., Dong, X. L., Li, B. D., & Xu, X. M. (2007). Effects of environmental factors on discharge and germination of ascospores of Venturia nashicola. Plant Pathology, 56(3), 402–411.
28. MacHardy, W. E. (1996). Apple scab: Biology, epidemiology and management. St. Paul: The American Phytopathological Society Press.
29. MacHardy, W. E., Gadoury, D. M., & Gessler, C. (2001). Parasitic and biological fitness of Venturia inaequalis: Relationship to disease management strategies. Plant Disease, 85(10), 1036–1051.
30. Öhberg, H., Ruth, P., & Bång, U. (2005). Effect of ploidy and flowering type of red clover cultivars and of isolate origin on severity of clover rot, Sclerotinia trifoliorum. Journal of Phytopathology, 153(9), 505–511.
31. Oswald, B. P., & Nuismer, S. L. (2007). Neopolyploidy and pathogen resistance. Proceedings Of The Royal Society Biological Sciences, 274, 2393–2397.
32. Parisi, L., Lespinasse, Y., Guillaumes, J., & Krüger, J. (1993). A new race of Venturia inaequalis virulent to apples with resistance due to the Vf gene. Phytopathology, 83(5), 533–537.
33. Riddle, N. C., Kato, A., & Birchler, J. A. (2006). Genetic variation for the response to ploidy change in Zea mays L. Theoretical and Applied Genetics, 114(1), 101–111.
34. Ross, R. G. (1974). Conidium production of Venturia inaequalis in synthetic culture media. Canadian Journal of Plant Science, 54(1), 93–100.
35. Schoen, D. J., Burdon, J. J., & Brown, A. H. D. (1992). Resistance of Glycine tomentella to soybean leaf rust Phakopsora pachyrhizi in relation to ploidy level and geographic distribution. Theoretical and Applied Genetics, 83(6), 827–832.
36. Segraves, K. A., & Anneberg, T. J. (2016). Species interactions and plant polyploidy. American Journal of Botany, 103(7), 1326–1335.
37. Soltis, D. E., Albert, V. A., Leebens-Mack, J., Bell, C. D., Paterson, A. H., Zheng, C., et al. (2009). Polyploidy and angiosperm diversification. American Journal of Botany, 96(1), 336–348.
38. Stover, R. H., & Buddenhagen, I. W. (1986). Banana breeding: Polyploidy, disease resistance and productivity. Fruits, 41(3), 175–191.
39. Tan, F.-Q., Tu, H., Liang, W.-J., Long, J.-M., Wu, X.-M., Zhang, H.-Y., & Guo, W.-W. (2015). Comparative metabolic and transcriptional analysis of a doubled diploid and its diploid citrus rootstock (C. junos cv. Ziyang xiangcheng) suggests its potential value for stress resistance improvement. BMC Plant Biology, 15, 89.
40. Tartarini, S., Gianfranceschi, L., Sansavini, S., & Gessler, C. (1999). Development of reliable PCR markers for the selection of the Vf gene conferring scab resistance in apple. Plant Breeding, 118(2), 183–186.
41. Te Beest, M., Le Roux, J. J., Richardson, D. M., Brysting, A. K., Suda, J., Kubesová, M., & Pysek, P. (2012). The more the better? The role of polyploidy in facilitating plant invasions. Annals of Botany, 109(1), 19–45.
42. Townsend, G. R., & Heuberger, J. W. (1943). Methods for estimating losses caused by diseases in fungicide experiments. Plant Disease Reporter, 27, 340.
43. Turner, M. L., MacHardy, W. E., & Gadoury, D. M. (1986). Germination and appressorium formation by Venturia inaequalis during infection of apple seedling leaves. Plant Disease, 70, 658–661.
44. Vestad, R. (1960). The effect of induced autotetraploidy on resistance to clover rot (Sclerotinia trifoliorum erikss.) in red clover. Euphytica, 9(1), 35–38.
45. Vleugels, T., Cnops, G., & van Bockstaele, E. (2013). Screening for resistance to clover rot (Sclerotinia spp.) among a diverse collection of red clover populations (Trifolium pratense L.) Euphytica, 194(3), 371–382.
46. Yu, Z., Haberer, G., Matthes, M., Rattei, T., Mayer, K. F. X., Gierl, A., & Torres-Ruiz, R. A. (2010). Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America, 107(41), 17809–17814.
47. Zubini, P., Baraldi, E., De Santis, A., Bertolini, P., & Mari, M. (2007). Expression of anti-oxidant enzyme genes in scald-resistant ‘Belfort’ and scab-susceptible ‘granny smith’ apples during cold storage. Horticultural Science and Biotechnology, 82, 149–155.