Genome sequences of four cluster P mycobacteriophages

Genome Announcements

Volumn 6, Issue 2, 2018, Pages

  Doyle, Erin L ^a   Fillman, Christy L ^b   Reyna, Nathan S ^c   Tobiason, Deborah M ^d   Westholm, Daniel E ^e   Askins, Jonathan L ^c   Backus, Brittany P ^c   Baker, Ashlynn C ^a   Ballard, Harrison S ^c   Bisesi, Paul J ^b   Bond, Logan ^c   Byrnes, Deanna ^d   Carlstedt, Hannah ^a   Dodson, Kinnon S ^c   Fallert, Megan J ^d   Foster, Kyla J ^b   Games, Daniel N ^c   Grams, Tristan R ^d   Guild, Nancy A ^b   Hurd, Autumn ^a   Iwata, Nicholas ^a   Kepler, Cassidy R ^a   Krenzke, Lucinda R ^d   Luekens, Kelly ^a   Lewis, Jackie ^a   McEntee, Cali ^a   McGee, Justin C ^c   Nalley, Noah ^c   Plymale, Ruth C ^c   Prochaska, Jade ^a   Rogers, Reid G ^c   Schipper, Jessica B ^b   Snyder, Kelsey ^a   Uhrich, Kali ^a   Vermillion, Chelsey D ^c   Vickers, Sarah K ^c   Wenta, Meredyth D ^d   Yates, Tyler Z ^b   Young, Chas F ^d   Stoner, Ty H ^f   Pope, Welkin H ^f   Jacobs Sera, Deborah ^f   Garlena, Rebecca A ^f   Russell, Daniel A ^f   Cresawn, Steven G ^g   Hatfull, Graham F ^f   more..

^a Doane University   (United States)

^b UNIVERSITY OF COLORADO SCHOOL OF MEDICINE   (United States)

^c OUACHITA BAPTIST UNIVERSITY   (United States)

^d CARTHAGE COLLEGE   (United States)

^e The College of St Scholastica   (United States)

^f UNIVERSITY OF PITTSBURGH   (United States)

^g JAMES MADISON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENOME; MYCOBACTERIOPHAGE; MYCOBACTERIUM SMEGMATIS; NONHUMAN; SOIL;

EID: 85041053053     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.01101-17     Document Type: Article

References (9)

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2. Broussard GW, Oldfield LM, Villanueva VM, Lunt BL, Shine EE, Hatfull GF. 2013. Integration-dependent bacteriophage immunity provides insights into the evolution of genetic switches. Mol Cell 49:237-248. https://doi.org/10.1016/j.molcel.2012.11.012
3. Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF, Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science, Phage Hunters Integrating Research and Education, Mycobacterial Genetics Course. 2015. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. ELife 4:e06416. https://doi.org/10.7554/eLife.06416
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6. Cresawn SG, Bogel M, Day N, Jacobs-Sera D, Hendrix RW, Hatfull GF. 2011. Phamerator: a bioinformatic tool for comparative bacteriophage genomics. BMC Bioinformatics 12:395. https://doi.org/10.1186/1471-2105-12-395
7. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403-410. https://doi.org/10.1016/S0022-2836(05)80360-2
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9. Hatfull GF, Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science (SEA-PHAGES) Program, KwaZulu-Natal Research Institute for Tuberculosis and HIV (K-RITH) Mycobacterial Genetics Course, University of California-Los Angeles Research Immersion Laboratory in Virology, Phage Hunters Integrating Research and Education (PHIRE) Program. 2016. Complete genome sequences of 61 mycobacteriophages. Genome Announc 4(4):e00389-16. https://doi.org/10.1128/genomeA.00389-16