메뉴 건너뛰기




Volumn , Issue , 1998, Pages 103-110

Gene family identification network design

Author keywords

[No Author keywords available]

Indexed keywords


EID: 85037848073     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IJSIS.1998.685426     Document Type: Conference Paper
Times cited : (3)

References (29)
  • 1
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequences of two proteins
    • Needleman, S. B. & Wunsch, C. D. (1970) A general method applicable to the search for similarities in the amino acid sequences of two proteins. J. Mol. Biol, 48, 443-453.
    • (1970) J. Mol. Biol , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 2
  • 5
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparisons
    • Pearson, W. R. & Lipman, D. J. (1988) Improved tools for biological sequence comparisons. Proc. Nat. Acad. Sci. USA, 85, 2444-2448.
    • (1988) Proc. Nat. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 7
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • Tatusov, R. L., Koonin, E. V. & Lipman, D. J. (1997) A genomic perspective on protein families. Science 278, 631-637.
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2    Lipman, D.J.3
  • 8
    • 0028118434 scopus 로고
    • Protein family classification based on searching a database of blocks
    • Henikoff, S. & Henikoff, J. G. (1994) Protein family classification based on searching a database of blocks. Genomics, 19, 97-107.
    • (1994) Genomics , vol.19 , pp. 97-107
    • Henikoff, S.1    Henikoff, J.G.2
  • 10
    • 0029665409 scopus 로고    scopus 로고
    • Identification of sequence pattern with profile analysis
    • Gribskov, M. & Veretnik, S. (1996). Identification of sequence pattern with profile analysis. Methods Enzymol., 266, 198-212.
    • (1996) Methods Enzymol , vol.266 , pp. 198-212
    • Gribskov, M.1    Veretnik, S.2
  • 11
    • 0028181441 scopus 로고
    • Hidden markov models in computational biology: Applications to protein modeling
    • Krogh, A., Brown, M., Mian, I. S., Sjolander, K. & Haussler, D. (1994) Hidden markov models in computational biology: Applications to protein modeling. J. Mol. Biol, 235, 1501-1531.
    • (1994) J. Mol. Biol , vol.235 , pp. 1501-1531
    • Krogh, A.1    Brown, M.2    Mian, I.S.3    Sjolander, K.4    Haussler, D.5
  • 12
    • 0029259085 scopus 로고
    • Maximum Discrimination hidden Markov models of sequence consensus
    • Eddy, S. R., Mitchison, G. & Durbin, R. (1995) Maximum Discrimination hidden Markov models of sequence consensus. J. Comp. Biol., 2, 9-23.
    • (1995) J. Comp. Biol. , vol.2 , pp. 9-23
    • Eddy, S.R.1    Mitchison, G.2    Durbin, R.3
  • 14
    • 0029884312 scopus 로고    scopus 로고
    • Gene classification artificial neural system
    • Wu, C. H. (1996) Gene Classification Artificial Neural System. Methods Enzymol., 266, 71-88.
    • (1996) Methods Enzymol , vol.266 , pp. 71-88
    • Wu, C.H.1
  • 15
    • 0029933832 scopus 로고    scopus 로고
    • Motif identification neural design for rapid and sensitive protein family search
    • Wu, C. H., Zhao, S., Chen, H. L., Lo, C. J. & McLarty, J. (1996) Motif identification neural design for rapid and sensitive protein family search. CABIOS, 12, 109-118.
    • (1996) CABIOS , vol.12 , pp. 109-118
    • Wu, C.H.1    Zhao, S.2    Chen, H.L.3    Lo, C.J.4    McLarty, J.5
  • 17
    • 0029934458 scopus 로고    scopus 로고
    • Superfamily classification in PIR-international protein sequence database
    • Barker, W. C, Pfeiffer, F. & George, D. (1996) Superfamily classification in PIR-international protein sequence database. Methods Enzymol., 266, 59-71.
    • (1996) Methods Enzymol , vol.266 , pp. 59-71
    • Barker, W.C.1    Pfeiffer, F.2    George, D.3
  • 18
    • 0030771126 scopus 로고    scopus 로고
    • The PROSITE database, its status in 1997
    • Bairoch, A., Bucher, P. & Hofmann, K. (1997) The PROSITE database, its status in 1997. Nuc. Acids Res., 25, 217-221.
    • (1997) Nuc. Acids Res. , vol.25 , pp. 217-221
    • Bairoch, A.1    Bucher, P.2    Hofmann, K.3
  • 19
    • 0031864543 scopus 로고    scopus 로고
    • The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998
    • Bairoch, A. & Apweiler, R. (1998) The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998. Nuc. Acids Res., 26, 38-42.
    • (1998) Nuc. Acids Res. , vol.26 , pp. 38-42
    • Bairoch, A.1    Apweiler, R.2
  • 20
    • 0031839544 scopus 로고    scopus 로고
    • Superior performance in protein homology detection with the Blocks database servers
    • Henikoff, S., Pietrokovski, S. & Henikoff, J. G. (1998) Superior performance in protein homology detection with the Blocks database servers. Nuc. Acids Res., 26, 309-312.
    • (1998) Nuc. Acids Res. , vol.26 , pp. 309-312
    • Henikoff, S.1    Pietrokovski, S.2    Henikoff, J.G.3
  • 22
    • 0031812904 scopus 로고    scopus 로고
    • The ProDom database of protein domain families
    • Corpet, F., Gouzy, J. & Kahn, D. (1998). The ProDom database of protein domain families. Nuc. Acids Res., 26, 323-326.
    • (1998) Nuc. Acids Res. , vol.26 , pp. 323-326
    • Corpet, F.1    Gouzy, J.2    Kahn, D.3
  • 23
    • 0031813130 scopus 로고    scopus 로고
    • Pfam: Multiple sequence alignments and HMM-profiles of protein domains
    • Sonnhammer, E. L. L., Eddy, S. R., Birney, E., Bateman, A. & Durbin, R. (1998) Pfam: Multiple sequence alignments and HMM-profiles of protein domains. Nuc. Acids Res., 26, 320-322.
    • (1998) Nuc. Acids Res. , vol.26 , pp. 320-322
    • Sonnhammer, E.L.L.1    Eddy, S.R.2    Birney, E.3    Bateman, A.4    Durbin, R.5
  • 24
    • 0030498354 scopus 로고    scopus 로고
    • A protein class database organized with ProSite protein groups and PIR superfamilies
    • Wu, C. H., Zhao, S. & Chen, H. L. (1996) A protein class database organized with ProSite protein groups and PIR superfamilies. J. Comp. Biol., 3, 547-562.
    • (1996) J. Comp. Biol. , vol.3 , pp. 547-562
    • Wu, C.H.1    Zhao, S.2    Chen, H.L.3
  • 25
    • 0031623251 scopus 로고    scopus 로고
    • ProClass protein family database: New version with motif alignments
    • R. B. Altman, A. K. Dunker, L. Hunter & T. E. Klein World Scientific Publishing
    • Wu, C. H. & Shivakumar, S. (1998) ProClass protein family database: New version with motif alignments. Proc. Pacific Symp. Biocomp. '98, eds., R. B. Altman, A. K. Dunker, L. Hunter & T. E. Klein, World Scientific Publishing, pp. 719-730.
    • (1998) Proc. Pacific Symp. Biocomp , vol.98 , pp. 719-730
    • Wu, C.H.1    Shivakumar, S.2
  • 26
    • 0025950944 scopus 로고
    • Searching protein sequence libraries: Comparison of the sensitivity and the selectivity of the Smith-Waterman and FASTA algorithms
    • Pearson, W. R. (1991) Searching protein sequence libraries: Comparison of the sensitivity and the selectivity of the Smith-Waterman and FASTA algorithms. Genomics, 11, 635-650.
    • (1991) Genomics , vol.11 , pp. 635-650
    • Pearson, W.R.1
  • 27
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nuc. Acids Res., 22, 4673-4680.
    • (1994) Nuc. Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 28
    • 13144274502 scopus 로고    scopus 로고
    • Protein family identification and information retrieval using a ProClass database and a motif neural design
    • In Press
    • Wu, C. H., Shivakumar, S. & Barker, W.C. (1997). Protein family identification and information retrieval using a ProClass database and a motif neural design. Math. Model. Sci. Comp., 8, (In Press).
    • (1997) Math. Model. Sci. Comp. , Issue.8
    • Wu, C.H.1    Shivakumar, S.2    Barker, W.C.3
  • 29
    • 0031827396 scopus 로고    scopus 로고
    • GeneFIND web server for protein family identification and information retrieval
    • In Press
    • Wu, C. H., Shivakumar, S., Shivakumar, C. V. & Chen S. (1998) GeneFIND web server for protein family identification and information retrieval. Bioinformatics, 14, (In Press).
    • (1998) Bioinformatics , pp. 14
    • Wu, C.H.1    Shivakumar, S.2    Shivakumar, C.V.3    Chen, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.