Sequencing, assembling, and finishing complete bacteriophage genomes

Methods in Molecular Biology

Volumn 1681, Issue , 2018, Pages 109-125

  Russell, Daniel A ^a  

^a UNIVERSITY OF PITTSBURGH   (United States)

Author keywords

454; AceUtil; Consed; Coverage; DNA sequencing; Galaxy; Genome termini; Illumina; Ion Torrent; Library preparation; Newbler; PAUSE; PhagesDB; Sanger

Indexed keywords

DNA;

BACTERIOPHAGE; DNA DETERMINATION; DNA SEQUENCE; GENOME; HUMAN; NONHUMAN; SANGER SEQUENCING; GENE LIBRARY; GENETICS; HIGH THROUGHPUT SEQUENCING; NUCLEOTIDE SEQUENCE; PROCEDURES; VIRUS GENOME;

BACTERIOPHAGES; BASE SEQUENCE; GENE LIBRARY; GENOME, VIRAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING;

EID: 85034213621     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-7343-9_9     Document Type: Chapter

References (9)

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8. Russell DA (2013) Quirks of ion torrent PGM data: on the other strand… http://phagesdb. Org/blog/posts/12/ Accessed 10 Jan 2015
9. Nakamura K, Oshima T, Morimoto T et al (2011) Sequence-specific error profile of Illumina sequencers. Nucleic Acids Res 39(13):e90