-
1
-
-
84980385738
-
Discriminating self from non-self in nucleic acid sensing
-
Schlee, M. & Hartmann, G. Discriminating self from non-self in nucleic acid sensing. Nat. Rev. Immunol. 16, 566-580 (2016).
-
(2016)
Nat. Rev. Immunol.
, vol.16
, pp. 566-580
-
-
Schlee, M.1
Hartmann, G.2
-
2
-
-
84893075305
-
Regulation of type i interferon responses
-
Ivashkiv, L. B. & Donlin, L. T. Regulation of type I interferon responses. Nat. Rev. Immunol. 14, 36-49 (2014).
-
(2014)
Nat. Rev. Immunol.
, vol.14
, pp. 36-49
-
-
Ivashkiv, L.B.1
Donlin, L.T.2
-
3
-
-
34247341367
-
TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-Imediated antiviral activity
-
Gack, M. U. et al. TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-Imediated antiviral activity. Nature 446, 916-920 (2007).
-
(2007)
Nature
, vol.446
, pp. 916-920
-
-
Gack, M.U.1
-
4
-
-
84952317720
-
Self-regulation and cross-regulation of pattern-recognition receptor signalling in health and disease
-
Cao, X. Self-regulation and cross-regulation of pattern-recognition receptor signalling in health and disease. Nat. Rev. Immunol. 16, 35-50 (2016).
-
(2016)
Nat. Rev. Immunol.
, vol.16
, pp. 35-50
-
-
Cao, X.1
-
5
-
-
84943454247
-
Siglec1 suppresses antiviral innate immune response by inducing TBK1 degradation via the ubiquitin ligase TRIM27
-
Zheng, Q. et al. Siglec1 suppresses antiviral innate immune response by inducing TBK1 degradation via the ubiquitin ligase TRIM27. Cell Res. 25, 1121-1136 (2015).
-
(2015)
Cell Res.
, vol.25
, pp. 1121-1136
-
-
Zheng, Q.1
-
6
-
-
84955401096
-
Endogenous TRIM5 function is regulated by SUMOylation and nuclear sequestration for efficient innate sensing in dendritic cells
-
Portilho, D. M. et al. Endogenous TRIM5 function is regulated by SUMOylation and nuclear sequestration for efficient innate sensing in dendritic cells. Cell Rep. 14, 355-369 (2016).
-
(2016)
Cell Rep.
, vol.14
, pp. 355-369
-
-
Portilho, D.M.1
-
7
-
-
84938805575
-
Herpesvirus genome recognition induced acetylation of nuclear IFI16 is essential for its cytoplasmic translocation, inflammasome and IFN-b responses
-
Ansari, M. A. et al. Herpesvirus genome recognition induced acetylation of nuclear IFI16 is essential for its cytoplasmic translocation, inflammasome and IFN-b responses. PLoS Pathog. 11, e1005019 (2015).
-
(2015)
PLoS Pathog.
, vol.11
, pp. e1005019
-
-
Ansari, M.A.1
-
8
-
-
84991475053
-
Transcriptional repression of IFN regulatory factor 7 by MYC is critical for type i IFN production in human plasmacytoid dendritic cells
-
Kim, T. W. et al. Transcriptional repression of IFN regulatory factor 7 by MYC is critical for type I IFN production in human plasmacytoid dendritic cells. J. Immunol. 197, 3348-3359 (2016).
-
(2016)
J. Immunol.
, vol.197
, pp. 3348-3359
-
-
Kim, T.W.1
-
9
-
-
79956314622
-
Immune signaling by RIG-I-like receptors
-
Loo, Y. M. & Gale, M. Jr. Immune signaling by RIG-I-like receptors. Immunity 34, 680-692 (2011).
-
(2011)
Immunity
, vol.34
, pp. 680-692
-
-
Loo, Y.M.1
Gale, M.2
-
10
-
-
80052969639
-
The helicase DDX41 senses intracellular DNA mediated by the adaptor STING in dendritic cells
-
Zhang, Z. et al. The helicase DDX41 senses intracellular DNA mediated by the adaptor STING in dendritic cells. Nat. Immunol. 12, 959-965 (2011).
-
(2011)
Nat. Immunol.
, vol.12
, pp. 959-965
-
-
Zhang, Z.1
-
11
-
-
84869403247
-
The helicase DDX41 recognizes the bacterial secondary messengers cyclic di-GMP and cyclic di-AMP to activate a type i interferon immune response
-
Parvatiyar, K. et al. The helicase DDX41 recognizes the bacterial secondary messengers cyclic di-GMP and cyclic di-AMP to activate a type I interferon immune response. Nat. Immunol. 13, 1155-1161 (2012).
-
(2012)
Nat. Immunol.
, vol.13
, pp. 1155-1161
-
-
Parvatiyar, K.1
-
12
-
-
80555133355
-
DHX9 pairs with IPS-1 to sense double-stranded RNA in myeloid dendritic cells
-
Zhang, Z., Yuan, B., Lu, N., Facchinetti, V. & Liu, Y. J. DHX9 pairs with IPS-1 to sense double-stranded RNA in myeloid dendritic cells. J. Immunol. 187, 4501-4508 (2011).
-
(2011)
J. Immunol.
, vol.187
, pp. 4501-4508
-
-
Zhang, Z.1
Yuan, B.2
Lu, N.3
Facchinetti, V.4
Liu, Y.J.5
-
13
-
-
49149113373
-
Viral targeting of DEAD box protein 3 reveals its role in TBK1/IKKepsilon-mediated IRF activation
-
Schröder, M., Baran, M. & Bowie, A. G. Viral targeting of DEAD box protein 3 reveals its role in TBK1/IKKepsilon-mediated IRF activation. EMBO J. 27, 2147-2157 (2008).
-
(2008)
EMBO J.
, vol.27
, pp. 2147-2157
-
-
Schröder, M.1
Baran, M.2
Bowie, A.G.3
-
14
-
-
79960724199
-
From unwinding to clamping-the DEAD box RNA helicase family
-
Linder, P. & Jankowsky, E. From unwinding to clamping-the DEAD box RNA helicase family. Nat. Rev. Mol. Cell Biol. 12, 505-516 (2011).
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 505-516
-
-
Linder, P.1
Jankowsky, E.2
-
15
-
-
84925283719
-
RNA helicase DDX21 coordinates transcription and ribosomal RNA processing
-
Calo, E. et al. RNA helicase DDX21 coordinates transcription and ribosomal RNA processing. Nature 518, 249-253 (2015).
-
(2015)
Nature
, vol.518
, pp. 249-253
-
-
Calo, E.1
-
16
-
-
84983753512
-
mRNA modifications: Dynamic regulators of gene expression
-
Hoernes, T. P., Hüttenhofer, A. & Erlacher, M. D. mRNA modifications: dynamic regulators of gene expression. RNA Biol. 13, 760-765 (2016).
-
(2016)
RNA Biol.
, vol.13
, pp. 760-765
-
-
Hoernes, T.P.1
Hüttenhofer, A.2
Erlacher, M.D.3
-
17
-
-
84922394767
-
Dynamic RNA modifications in posttranscriptional regulation
-
Wang, X. & He, C. Dynamic RNA modifications in posttranscriptional regulation. Mol. Cell 56, 5-12 (2014).
-
(2014)
Mol. Cell
, vol.56
, pp. 5-12
-
-
Wang, X.1
He, C.2
-
18
-
-
0016285746
-
Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells
-
Desrosiers, R., Friderici, K. & Rottman, F. Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells. Proc. Natl. Acad. Sci. USA 71, 3971-3975 (1974).
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 3971-3975
-
-
Desrosiers, R.1
Friderici, K.2
Rottman, F.3
-
19
-
-
84897110592
-
A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation
-
Liu, J. et al. A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation. Nat. Chem. Biol. 10, 93-95 (2014).
-
(2014)
Nat. Chem. Biol.
, vol.10
, pp. 93-95
-
-
Liu, J.1
-
20
-
-
81355146483
-
N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO
-
Jia, G. et al. N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO. Nat. Chem. Biol. 7, 885-887 (2011).
-
(2011)
Nat. Chem. Biol.
, vol.7
, pp. 885-887
-
-
Jia, G.1
-
21
-
-
84892372347
-
N6-methyladenosine-dependent regulation of messenger RNA stability
-
Wang, X. et al. N6-methyladenosine-dependent regulation of messenger RNA stability. Nature 505, 117-120 (2014).
-
(2014)
Nature
, vol.505
, pp. 117-120
-
-
Wang, X.1
-
22
-
-
84941424170
-
HNRNPA2B1 is a mediator of m(6)A-dependent nuclear RNA processing events
-
Alarcón, C. R. et al. HNRNPA2B1 is a mediator of m(6)A-dependent nuclear RNA processing events. Cell 162, 1299-1308 (2015).
-
(2015)
Cell
, vol.162
, pp. 1299-1308
-
-
Alarcón, C.R.1
-
23
-
-
84924072927
-
N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions
-
Liu, N. et al. N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions. Nature 518, 560-564 (2015).
-
(2015)
Nature
, vol.518
, pp. 560-564
-
-
Liu, N.1
-
24
-
-
84922342926
-
Stem cells. M6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation
-
Geula, S. et al. Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation. Science 347, 1002-1006 (2015).
-
(2015)
Science
, vol.347
, pp. 1002-1006
-
-
Geula, S.1
-
25
-
-
84920273757
-
FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis
-
Zhao, X. et al. FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis. Cell Res. 24, 1403-1419 (2014).
-
(2014)
Cell Res.
, vol.24
, pp. 1403-1419
-
-
Zhao, X.1
-
26
-
-
84872274463
-
ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility
-
Zheng, G. et al. ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility. Mol. Cell 49, 18-29 (2013).
-
(2013)
Mol. Cell
, vol.49
, pp. 18-29
-
-
Zheng, G.1
-
27
-
-
84887875528
-
RNA-methylation-dependent RNA processing controls the speed of the circadian clock
-
Fustin, J. M. et al. RNA-methylation-dependent RNA processing controls the speed of the circadian clock. Cell 155, 793-806 (2013).
-
(2013)
Cell
, vol.155
, pp. 793-806
-
-
Fustin, J.M.1
-
28
-
-
84875174459
-
RNA helicases in splicing
-
Cordin, O. & Beggs, J. D. RNA helicases in splicing. RNA Biol. 10, 83-95 (2013).
-
(2013)
RNA Biol.
, vol.10
, pp. 83-95
-
-
Cordin, O.1
Beggs, J.D.2
-
29
-
-
84920501201
-
A novel mechanism for Prp5 function in prespliceosome formation and proofreading the branch site sequence
-
Liang, W. W. & Cheng, S. C. A novel mechanism for Prp5 function in prespliceosome formation and proofreading the branch site sequence. Genes Dev. 29, 81-93 (2015).
-
(2015)
Genes Dev
, vol.29
, pp. 81-93
-
-
Liang, W.W.1
Cheng, S.C.2
-
30
-
-
84973126918
-
The multiple functions of RNA helicases as drivers and regulators of gene expression
-
Bourgeois, C. F., Mortreux, F. & Auboeuf, D. The multiple functions of RNA helicases as drivers and regulators of gene expression. Nat. Rev. Mol. Cell Biol. 17, 426-438 (2016).
-
(2016)
Nat. Rev. Mol. Cell Biol.
, vol.17
, pp. 426-438
-
-
Bourgeois, C.F.1
Mortreux, F.2
Auboeuf, D.3
-
31
-
-
84877923560
-
DEAD-box helicases as integrators of RNA, nucleotide and protein binding
-
Putnam, A. A. & Jankowsky, E. DEAD-box helicases as integrators of RNA, nucleotide and protein binding. Biochim. Biophys. Acta 1829, 884-893 (2013).
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 884-893
-
-
Putnam, A.A.1
Jankowsky, E.2
-
32
-
-
84860779086
-
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
-
Dominissini, D. et al. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature 485, 201-206 (2012).
-
(2012)
Nature
, vol.485
, pp. 201-206
-
-
Dominissini, D.1
-
33
-
-
1542380571
-
Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA
-
Xu, Y. Z. et al. Prp5 bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA. EMBO J. 23, 376-385 (2004).
-
(2004)
EMBO J.
, vol.23
, pp. 376-385
-
-
Xu, Y.Z.1
-
34
-
-
84883436730
-
Ddx46 is required for multi-lineage differentiation of hematopoietic stem cells in zebrafish
-
Hirabayashi, R., Hozumi, S., Higashijima, S. & Kikuchi, Y. Ddx46 is required for multi-lineage differentiation of hematopoietic stem cells in zebrafish. Stem Cells Dev. 22, 2532-2542 (2013).
-
(2013)
Stem Cells Dev.
, vol.22
, pp. 2532-2542
-
-
Hirabayashi, R.1
Hozumi, S.2
Higashijima, S.3
Kikuchi, Y.4
-
35
-
-
84858591078
-
DEAD-box protein Ddx46 is required for the development of the digestive organs and brain in zebrafish
-
Hozumi, S. et al. DEAD-box protein Ddx46 is required for the development of the digestive organs and brain in zebrafish. PLoS One 7, e33675 (2012).
-
(2012)
PLoS One
, vol.7
, pp. e33675
-
-
Hozumi, S.1
-
36
-
-
84873323035
-
Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements
-
Zarnack, K. et al. Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements. Cell 152, 453-466 (2013).
-
(2013)
Cell
, vol.152
, pp. 453-466
-
-
Zarnack, K.1
-
37
-
-
84875167118
-
Incoming RNA virus nucleocapsids containing a 5-triphosphorylated genome activate RIG-I and antiviral signaling
-
Weber, M. et al. Incoming RNA virus nucleocapsids containing a 5-triphosphorylated genome activate RIG-I and antiviral signaling. Cell Host Microbe 13, 336-346 (2013).
-
(2013)
Cell Host Microbe
, vol.13
, pp. 336-346
-
-
Weber, M.1
-
38
-
-
84938226081
-
Nuclear retention of full-length HTT RNA is mediated by splicing factors MBNL1 and U2AF65
-
Sun, X. et al. Nuclear retention of full-length HTT RNA is mediated by splicing factors MBNL1 and U2AF65. Sci. Rep. 5, 12521 (2015).
-
(2015)
Sci. Rep.
, vol.5
, pp. 12521
-
-
Sun, X.1
-
39
-
-
68949212914
-
Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: Functional role of a nuclear noncoding RNA
-
Chen, L. L. & Carmichael, G. G. Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. Mol. Cell 35, 467-478 (2009).
-
(2009)
Mol. Cell
, vol.35
, pp. 467-478
-
-
Chen, L.L.1
Carmichael, G.G.2
-
40
-
-
84920460444
-
Detained introns are a novel, widespread class of post-transcriptionally spliced introns
-
Boutz, P. L., Bhutkar, A. & Sharp, P. A. Detained introns are a novel, widespread class of post-transcriptionally spliced introns. Genes Dev. 29, 63-80 (2015).
-
(2015)
Genes Dev.
, vol.29
, pp. 63-80
-
-
Boutz, P.L.1
Bhutkar, A.2
Sharp, P.A.3
-
41
-
-
84974845506
-
Nuclear retention of mRNA in mammalian tissues
-
Bahar Halpern, K. et al. Nuclear retention of mRNA in mammalian tissues. Cell Rep. 13, 2653-2662 (2015).
-
(2015)
Cell Rep.
, vol.13
, pp. 2653-2662
-
-
Bahar Halpern, K.1
-
42
-
-
6344282195
-
Nuclear pre-mRNA decapping and 5 degradation in yeast require the Lsm2-8p complex
-
Kufel, J., Bousquet-Antonelli, C., Beggs, J. D. & Tollervey, D. Nuclear pre-mRNA decapping and 5 degradation in yeast require the Lsm2-8p complex. Mol. Cell. Biol. 24, 9646-9657 (2004).
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 9646-9657
-
-
Kufel, J.1
Bousquet-Antonelli, C.2
Beggs, J.D.3
Tollervey, D.4
-
43
-
-
84973100782
-
Methyltransferase Dnmt3a upregulates HDAC9 to deacetylate the kinase TBK1 for activation of antiviral innate immunity
-
Li, X. et al. Methyltransferase Dnmt3a upregulates HDAC9 to deacetylate the kinase TBK1 for activation of antiviral innate immunity. Nat. Immunol. 17, 806-815 (2016).
-
(2016)
Nat. Immunol.
, vol.17
, pp. 806-815
-
-
Li, X.1
-
44
-
-
84899486799
-
The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation
-
Wang, P. et al. The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation. Science 344, 310-313 (2014).
-
(2014)
Science
, vol.344
, pp. 310-313
-
-
Wang, P.1
-
45
-
-
84903556575
-
Rhbdd3 controls autoimmunity by suppressing the production of IL-6 by dendritic cells via K27-linked ubiquitination of the regulator NEMO
-
Liu, J. et al. Rhbdd3 controls autoimmunity by suppressing the production of IL-6 by dendritic cells via K27-linked ubiquitination of the regulator NEMO. Nat. Immunol. 15, 612-622 (2014).
-
(2014)
Nat. Immunol.
, vol.15
, pp. 612-622
-
-
Liu, J.1
-
46
-
-
84894233636
-
ICLIP: Protein-RNA interactions at nucleotide resolution
-
Huppertz, I. et al. iCLIP: protein-RNA interactions at nucleotide resolution. Methods 65, 274-287 (2014).
-
(2014)
Methods
, vol.65
, pp. 274-287
-
-
Huppertz, I.1
-
47
-
-
84893256374
-
Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis
-
Moore, M. J. et al. Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis. Nat. Protoc. 9, 263-293 (2014).
-
(2014)
Nat. Protoc.
, vol.9
, pp. 263-293
-
-
Moore, M.J.1
-
48
-
-
34548180483
-
Immunoprecipitation of mRNA-protein complexes
-
Peritz, T. et al. Immunoprecipitation of mRNA-protein complexes. Nat. Protoc. 1, 577-580 (2006).
-
(2006)
Nat. Protoc.
, vol.1
, pp. 577-580
-
-
Peritz, T.1
-
49
-
-
78649714014
-
Analysis and design of RNA sequencing experiments for identifying isoform regulation
-
Katz, Y., Wang, E. T., Airoldi, E. M. & Burge, C. B. Analysis and design of RNA sequencing experiments for identifying isoform regulation. Nat. Methods 7, 1009-1015 (2010).
-
(2010)
Nat. Methods
, vol.7
, pp. 1009-1015
-
-
Katz, Y.1
Wang, E.T.2
Airoldi, E.M.3
Burge, C.B.4
-
50
-
-
79551685675
-
A TALE nuclease architecture for efficient genome editing
-
Miller, J. C. et al. A TALE nuclease architecture for efficient genome editing. Nat. Biotechnol. 29, 143-148 (2011).
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 143-148
-
-
Miller, J.C.1
|