Utilization of simultaneous saccharification and fermentation residues as feedstock for lipid accumulation in Rhodococcus opacus

AMB Express

Volumn 7, Issue 1, 2017, Pages

  Le, Rosemary K ^a   Das, Parthapratim ^a   Mahan, Kristina M ^a   Anderson, Seth A ^a   Wells, Tyrone ^a   Yuan, Joshua S ^d   Ragauskas, Arthur J ^a,b,c  

^a University of Tennessee Knoxville   (United States)

^b UNIVERSITY OF TENNESSEE INSTITUTE OF AGRICULTURE   (United States)

^c OAK RIDGE NATIONAL LABORATORY   (United States)

^d TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Biofuel; Dilute acid pretreatment; Lipids; Rhodococcus opacus; Simultaneous saccharification and fermentation

Indexed keywords

FATTY ACID ESTER;

AMPEROMETRY; ANION EXCHANGE CHROMATOGRAPHY; ARTICLE; BACTERIAL COUNT; BACTERIAL STRAIN; BATCH FERMENTATION; CARBOHYDRATE ANALYSIS; FERMENTATION; GEL PERMEATION CHROMATOGRAPHY; INFRARED SPECTROSCOPY; LIPID STORAGE; MOLECULAR WEIGHT; NONHUMAN; RHODOCOCCUS OPACUS; SACCHARIFICATION; YEAST;

EID: 85030449257     PISSN: None     EISSN: 21910855     Source Type: Journal    
DOI: 10.1186/s13568-017-0484-0     Document Type: Article

References (48)

1. Abdelaziz OY, Brink DP, Prothmann J, Ravi K, Sun M, Garcia-Hidalgo J, Sandahl M, Hulteberg CP, Turner C, Liden G, Gorwa-Grauslund MF (2016) Biological valorization of low molecular weight lignin. Biotechnol Adv 34:1318–1346. doi:10.1016/j.biotechadv.2016.10.001
2. Abe SI, Takagi M (1991) Simultaneous saccharification and fermentation of cellulose to lactic acid. Biotechnol Bioeng 37:93–96. doi:10.1002/bit.260370113
3. Alvarez HM, Steinbuechel A (2002) Triacylglycerols in prokaryotic microorganisms. Appl Microbiol Biotechnol 60:367–376. doi:10.1007/s00253-002-1135-0
4. Alvarez HM, Kalscheuer R, Steinbuchel A (2000) Accumulation and mobilization of storage lipids by Rhodococcus opacus PD630 and Rhodococcus ruber NCIMB 40126. Appl Microbiol Biotechnol 54:218–223. doi:10.1007/s002530000395
5. Beckham GT, Johnson CW, Karp EM, Salvachúa D, Vardon DR (2016) Opportunities and challenges in biological lignin valorization. Curr Opin Biotechnol 42:40–53. doi:10.1016/j.copbio.2016.02.030
6. Bond JQ, Upadhye AA, Olcay H, Tompsett GA, Jae J, Xing R, Alonso DM, Wang D, Zhang T, Kumar R, Foster A, Sen SM, Maravelias CT, Malina R, Barrettm SRH, Lobo R, Wyman CE, Dumesicb JA, Huber GW (2014) Production of renewable jet fuel range alkanes and commodity chemicals from integrated catalytic processing of biomass. Energy Environ Sci 7:1500–1523. doi:10.1039/C3EE43846E
7. Brodeur G, Yau E, Badal K, Collier J, Ramachandran K, Ramakrishnan S (2011) Chemical and physicochemical pretreatment of lignocellulosic biomass: a review. Enzyme Res 1–17. doi:10.4061/2011/787532
8. Brown TR, Brown RC (2013) A review of cellulosic biofuel commercial-scale projects in the United States biofuels. Bioprod Biorefin 7:235–245. doi:10.1002/bbb.1387
9. Chen X, Li Z, Zhang X, Hu F, Ryu DD, Bao J (2009) Screening of oleaginous yeast strains tolerant to lignocellulose degradation compounds. Appl Biochem Biotechnol 159:591–604
10. David K, Ragauskas AJ (2010) Switchgrass as an energy crop for biofuel production: a review of its ligno-cellulosic chemical properties. Energy Environ Sci 3:1182–1190. doi:10.1039/B926617H
11. Dowe N, McMillan J (2008) SSF experimental protocols—lignocellulosic biomass hydrolysis and fermentation. NREL technical report: NREL/TP-510-42630
12. Gomez JA, Höffner K, Barton PI (2016) From sugars to biodiesel using microalgae and yeast. Green Chem 18:461–475
13. Hu Z, Foston MB, Ragauskas AJ (2011) Biomass characterization of morphological portions of alamo switchgrass. J Agric Food Chem 59:7765–7772
14. Karatzos S, McMillan JD, Saddler JN (2014) The potential and challenges of drop-in biofuels. Report for IEA Bioenergy Task 39
15. Kline LM, Hayes DG, Womac AR, Labbe N (2010) Simplified determination of lignin content in hard and soft woods via UV-spectrophotometric analysis of biomass dissolved in ionic liquids. Bioresources 5:1366–1383
16. Kosa M, Ragauskas AJ (2011) Lipids from heterotrophic microbes: advances in metabolism research. Trends Biotechnol 29:53–61. doi:10.1016/j.tibtech.2010.11.002
17. Kosa M, Ragauskas AJ (2012) Bioconversion of lignin model compounds with oleaginous Rhodococci. Appl Microbiol Biotechnol 93:891–900. doi:10.1007/s00253-011-3743-z
18. Kosa M, Ragauskas AJ (2013) Lignin to lipid bioconversion by oleaginous Rhodococci. Green Chem 15:2070–2074. doi:10.1039/C3GC40434J
19. Kumar P, Barrett DM, Delwiche MJ, Stroeve P (2009) Methods for pretreatment of lignocellulosic biomass for efficient hydrolysis and biofuel production. Ind Eng Chem Res 48:3713–3729. doi:10.1021/ie801542g
20. Le RK, Wells T Jr, Das P, Meng X, Stoklosa RJ, Bhalla A, Hodge DB, Yuan JS, Ragauskas AJ (2017) Conversion of corn stover alkaline pre-treatment waste streams into biodiesel via Rhodococci. RSC Adv 7:4108–4115. doi:10.1039/C6RA28033A
21. Leiva-Candia D, Pinzi S, Redel-Macías M, Koutinas A, Webb C, Dorado M (2014) The potential for agro-industrial waste utilization using oleaginous yeast for the production of biodiesel. Fuel 123:33–42
22. Linger JG, Vardon DR, Guarnieri MT, Karp EM, Hunsinger GB, Franden MA, Johnson CW, Chupka G, Strathmann TJ, Pienkos PT, Beckham GT (2014) Lignin valorization through integrated biological funneling and chemical catalysis. Proc Natl Acad Sci USA 111:12013–12018. doi:10.1073/pnas.1410657111
23. Meng X, Sun Q, Kosa M, Huang F, Pu Y, Ragauskas AJ (2016) Physicochemical structural changes of poplar and switchgrass during biomass pretreatment and enzymatic hydrolysis. ACS Sustain Chem Eng 4:4563–4572. doi:10.1021/acssuschemeng.6b00603
24. Mu W, Ben H, Ragauskas A, Deng Y (2013) Lignin pyrolysis components and upgrading—technology review. Bioenergy Res 6:1183–1204. doi:10.1007/s12155-013-9314-7
25. Munch G, Sestric R, Sparling R, Levin DB, Cicek N (2015) Lipid production in the under-characterized oleaginous yeasts, Rhodosporidium babjevae and Rhodosporidium diobovatum, from biodiesel-derived waste glycerol. Bioresour Technol 185:49–55
26. Olofsson K, Bertilsson M, Lidén G (2008) A short review on SSF—an interesting process option for ethanol production from lignocellulosic feedstocks. Biotechnol Biofuels 1:7. doi:10.1186/1754-6834-1-7
27. Palazzolo MA, Kurina-Sanz M (2016) Microbial utilization of lignin: available biotechnologies for its degradation and valorization. World J Microbiol Biotechnol 32:173. doi:10.1007/s11274-016-2128-y
28. Ragauskas AJ, Beckham GT, Biddy MJ, Chandra R, Chen F, Davis MF, Davison BH, Dixon RA, Gilna P, Keller M, Langan P, Naskar AK, Saddler JN, Tschaplinski TJ, Tuskan GA, Wymane CE (2014) Lignin valorization: improving lignin processing in the biorefinery. Science 344:1246843-1–1246843-10
29. Rye L, Blakey S, Wilson CW (2010) Sustainability of supply or the planet: a review of potential drop-in alternative aviation fuels. Energy Environ Sci 3:17–27. doi:10.1039/B918197K
30. Saha BC, Iten LB, Cotta MA, Wu YV (2005) Dilute acid pretreatment, enzymatic saccharification and fermentation of wheat straw to ethanol. Process Biochem 40:3693–3700
31. Salvachúa D, Karp EM, Nimlos CT, Vardon DR, Beckham GT (2015) Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria. Green Chem 17:4951–4967
32. Schlegel H, Kaltwasser H, Gottschalk G (1961) A submersion method for culture of hydrogen-oxidizing bacteria: growth physiological studies. Arch Microbiol 38:209–222
33. Sluiter A, Hames B, Ruiz R, Scarlata C, Sluiter J, Templeton D, Crocker D (2008) Determination of structural carbohydrates and lignin in biomass. NREL Technical Report: NREL/TP-510-42618
34. South C, Hogsett D, Lynd L (1995) Modeling simultaneous saccharification and fermentation of lignocellulose to ethanol in batch and continuous reactors. Enzyme Microb Technol 17:797–803
35. US-EIA (2015) Annual Energy Outlook (AEO) with projections to 2040. https://www.eia.gov/outlooks/aeo/pdf/0383(2015).pdf. Accessed 11 Aug 2017
36. Vardon DR, Franden MA, Johnson CW, Karp EM, Guarnieri MT, Linger JG, Salm MJ, Strathmann TJ, Beckham GT (2015) Adipic acid production from lignin. Energy Environ Sci 8:617–628. doi:10.1039/C4EE03230F
37. Wei Z, Zeng G, Huang F, Kosa M, Huang D, Ragauskas AJ (2015a) Bioconversion of oxygen-pretreated kraft lignin to microbial lipid with oleaginous Rhodococcus opacus DSM 1069. Green Chem 17:2784–2789. doi:10.1039/C5GC00422E
38. Wei Z, Zeng G, Huang F, Kosa M, Sun Q, Meng X, Huang D, Ragauskas AJ (2015b) Microbial lipid production by oleaginous Rhodococci cultured in lignocellulosic autohydrolysates. Appl Microbiol Biotechnol 99:7369–7377. doi:10.1007/s00253-015-6752-6755
39. Wei Z, Zeng G, Kosa M, Huang D, Ragauskas AJ (2015c) Pyrolysis oil-based lipid production as biodiesel feedstock by Rhodococcus opacus. Appl Biochem Biotechnol 175:1234–1246
40. Wells T, Ragauskas AJ (2012) Biotechnological opportunities with the β-ketoadipate pathway. Trends Biotechnol 30:627–637. doi:10.1016/j.tibtech.2012.09.008
41. Wells T, Wei Z, Ragauskas A (2015) Bioconversion of lignocellulosic pretreatment effluent via oleaginous Rhodococcus opacus DSM 1069. Biomass Bioenergy 72:200–205
42. Won KY, Kim YS, Oh KK (2012) Comparison of bioethanol production of simultaneous saccharification & fermentation and separation hydrolysis & fermentation from cellulose-rich barley straw. Korean J Chem Eng 29:1341–1346
43. Wyman CE, Spindler DD, Grohmann K (1992) Simultaneous saccharification and fermentation of several lignocellulosic feedstocks to fuel ethanol. Biomass Bioenergy 3:301–307. doi:10.1016/0961-9534(92)90001-7
44. Xie S, Ragauskas AJ, Yuan JS (2016) Lignin conversion: opportunities and challenges for the integrated biorefinery. Ind Biotechnol 12:161–167
45. Xu F, Yu J, Tesso T, Dowell F, Wang D (2013) Qualitative and quantitative analysis of lignocellulosic biomass using infrared techniques: a mini-review. Appl Energy 104:801–809. doi:10.1016/j.apenergy.2012.12.019
46. Yousuf A (2012) Biodiesel from lignocellulosic biomass—prospects and challenges. Waste Manag 32:2061–2067
47. Yu X, Zheng Y, Dorgan KM, Chen S (2011) Oil production by oleaginous yeasts using the hydrolysate from pretreatment of wheat straw with dilute sulfuric acid. Bioresour Technol 102:6134–6140
48. Zhou X, Ge H, Xia L, Zhang D, Hu C (2013) Evaluation of oil-producing algae as potential biodiesel feedstock. Bioresour Technol 134:24–29