-
2
-
-
33749386605
-
Development and evaluation of a DNA-barcoding approach for the rapid identification of nematodes
-
Bhadury, P., Austen, M.C., Bilton, D.T., Lambshead, P.J.D., Rogers, A.D. & Smerdon, G.R. (2006) Development and evaluation of a DNA-barcoding approach for the rapid identification of nematodes. Marine Ecology Progress Series, 320, 1-9.
-
(2006)
Marine Ecology Progress Series
, vol.320
, pp. 1-9
-
-
Bhadury, P.1
Austen, M.C.2
Bilton, D.T.3
Lambshead, P.J.D.4
Rogers, A.D.5
Smerdon, G.R.6
-
3
-
-
84857508990
-
Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments
-
Bik, H.M., Sung, W., de Ley, P., Baldwin, J.G., Sharma, J., Rocha-Olivares, A. & Thomas, W.K. (2012) Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments. Molecular Ecology, 21, 1048-1059.
-
(2012)
Molecular Ecology
, vol.21
, pp. 1048-1059
-
-
Bik, H.M.1
Sung, W.2
de Ley, P.3
Baldwin, J.G.4
Sharma, J.5
Rocha-Olivares, A.6
Thomas, W.K.7
-
5
-
-
0026615553
-
Estimating population size for capture-recapture data when capture probabilities vary by time and individual animal
-
Chao, A., Lee, S.-M. & Jeng, S.-L. (1992) Estimating population size for capture-recapture data when capture probabilities vary by time and individual animal. Biometrics, 48, 201-216.
-
(1992)
Biometrics
, vol.48
, pp. 201-216
-
-
Chao, A.1
Lee, S.-M.2
Jeng, S.-L.3
-
6
-
-
84876306462
-
Latitudinal phytoplankton distribution and the neutral theory of biodiversity
-
Chust, G., Irigoien, X., Chave, J. & Harris, R.P. (2013) Latitudinal phytoplankton distribution and the neutral theory of biodiversity. Global Ecology and Biogeography, 22, 531-543.
-
(2013)
Global Ecology and Biogeography
, vol.22
, pp. 531-543
-
-
Chust, G.1
Irigoien, X.2
Chave, J.3
Harris, R.P.4
-
9
-
-
33746611586
-
European marine biodiversity inventory and taxonomic resources: state of the art and gaps in knowledge
-
Costello, M.J., Bouchet, P., Emblow, C.S. & Legakis, A. (2006) European marine biodiversity inventory and taxonomic resources: state of the art and gaps in knowledge. Marine Ecology Progress Series, 316, 257-268.
-
(2006)
Marine Ecology Progress Series
, vol.316
, pp. 257-268
-
-
Costello, M.J.1
Bouchet, P.2
Emblow, C.S.3
Legakis, A.4
-
10
-
-
77951929876
-
Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises
-
Creer, S., Fonseca, V.G., Porazinska, D.L., Giblin-Davis, R.M., Sung, W., Power, D.M., Packer, M., Carvalho, G.R., Blaxter, M.L., Lambshead, P.J.D. & Thomas, W.K. (2010) Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises. Molecular Ecology, 19, Suppl. S1, 4-20.
-
(2010)
Molecular Ecology
, vol.19
, pp. 4-20
-
-
Creer, S.1
Fonseca, V.G.2
Porazinska, D.L.3
Giblin-Davis, R.M.4
Sung, W.5
Power, D.M.6
Packer, M.7
Carvalho, G.R.8
Blaxter, M.L.9
Lambshead, P.J.D.10
Thomas, W.K.11
-
11
-
-
38849163365
-
Exponential decline of deep-sea ecosystem functioning linked to benthic biodiversity loss
-
Danovaro, R., Gambi, C., Dell'Anno, A., Corinaldesi, C., Fraschetti, S., Vanreusel, A., Vincx, M. & Gooday, A.J. (2008) Exponential decline of deep-sea ecosystem functioning linked to benthic biodiversity loss. Current Biology, 18, 1-8.
-
(2008)
Current Biology
, vol.18
, pp. 1-8
-
-
Danovaro, R.1
Gambi, C.2
Dell'Anno, A.3
Corinaldesi, C.4
Fraschetti, S.5
Vanreusel, A.6
Vincx, M.7
Gooday, A.J.8
-
12
-
-
4043087606
-
The ubiquity of small species: patterns of local and global diversity
-
Fenchel, T. & Finlay, B.J. (2004) The ubiquity of small species: patterns of local and global diversity. BioScience, 54, 777-784.
-
(2004)
BioScience
, vol.54
, pp. 777-784
-
-
Fenchel, T.1
Finlay, B.J.2
-
13
-
-
0037052531
-
Global dispersal of free-living microbial eukaryote species
-
Finlay, B.J. (2002) Global dispersal of free-living microbial eukaryote species. Science, 296, 1061-1063.
-
(2002)
Science
, vol.296
, pp. 1061-1063
-
-
Finlay, B.J.1
-
14
-
-
33646841490
-
Biogeography and dispersal of micro-organisms: a review emphasizing protists
-
Foissner, W. (2006) Biogeography and dispersal of micro-organisms: a review emphasizing protists. Acta Protozoologica, 45, 111-136.
-
(2006)
Acta Protozoologica
, vol.45
, pp. 111-136
-
-
Foissner, W.1
-
15
-
-
84928584476
-
Isolation of marine meiofauna from sandy sediments: from decanting to DNA extraction
-
Fonseca, V., Power, D., Carvalho, G., Lambshead, J., Packer, M. & Creer, S. (2011) Isolation of marine meiofauna from sandy sediments: from decanting to DNA extraction. Protocol Exchange. doi: 10.1038/nprot.2010.157.
-
(2011)
Protocol Exchange
-
-
Fonseca, V.1
Power, D.2
Carvalho, G.3
Lambshead, J.4
Packer, M.5
Creer, S.6
-
16
-
-
84880321899
-
Second-generation environmental sequencing unmasks marine metazoan biodiversity
-
Fonseca, V.G., Carvalho, G.R., Sung, W., Johnson, H.F., Power, D.M., Neill, S.P., Packer, M., Blaxter, M.L., Lambshead, P.J.D., Thomas, W.K. & Creer, S. (2010) Second-generation environmental sequencing unmasks marine metazoan biodiversity. Nature Communications, 1, doi: 10.1038.
-
(2010)
Nature Communications
, vol.1
-
-
Fonseca, V.G.1
Carvalho, G.R.2
Sung, W.3
Johnson, H.F.4
Power, D.M.5
Neill, S.P.6
Packer, M.7
Blaxter, M.L.8
Lambshead, P.J.D.9
Thomas, W.K.10
Creer, S.11
-
17
-
-
84861371375
-
Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses
-
Fonseca, V.G., Nichols, B., Lallias, D., Quince, C., Carvalho, G.R., Power, D.M. & Creer, S. (2012) Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses. Nucleic Acids Research, 40, e66.
-
(2012)
Nucleic Acids Research
, vol.40
, pp. e66
-
-
Fonseca, V.G.1
Nichols, B.2
Lallias, D.3
Quince, C.4
Carvalho, G.R.5
Power, D.M.6
Creer, S.7
-
19
-
-
84867907470
-
Pole-to-pole biogeography of surface and deep marine bacterial communities
-
Ghiglione, J.-F., Galand, P.E., Pommier, T., Pedrós-Alió, C., Maas, E.W., Bakker, K., Bertilson, S., Kirchman, D.L., Lovejoy, C., Yager, P.L. & Murray, A.E. (2012) Pole-to-pole biogeography of surface and deep marine bacterial communities. Proceedings of the National Academy of Sciences USA, 109, 17633-17638.
-
(2012)
Proceedings of the National Academy of Sciences USA
, vol.109
, pp. 17633-17638
-
-
Ghiglione, J.-F.1
Galand, P.E.2
Pommier, T.3
Pedrós-Alió, C.4
Maas, E.W.5
Bakker, K.6
Bertilson, S.7
Kirchman, D.L.8
Lovejoy, C.9
Yager, P.L.10
Murray, A.E.11
-
21
-
-
10644260347
-
Spatial scaling of microbial eukaryote diversity
-
Green, J.L., Holmes, A.J., Westoby, M., Oliver, I., Briscoe, D., Dangerfield, M., Gillings, M. & Beattie, A. (2004) Spatial scaling of microbial eukaryote diversity. Nature, 432, 747-750.
-
(2004)
Nature
, vol.432
, pp. 747-750
-
-
Green, J.L.1
Holmes, A.J.2
Westoby, M.3
Oliver, I.4
Briscoe, D.5
Dangerfield, M.6
Gillings, M.7
Beattie, A.8
-
22
-
-
79954587407
-
Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos
-
Hajibabaei, M., Shokralla, S., Zhou, X., Singer, G.A.C. & Baird, D.J. (2011) Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos. PLoS ONE, 6, e17497.
-
(2011)
PLoS ONE
, vol.6
, pp. e17497
-
-
Hajibabaei, M.1
Shokralla, S.2
Zhou, X.3
Singer, G.A.C.4
Baird, D.J.5
-
23
-
-
0029768299
-
Genetic and evolutionary consequences of metapopulation structure
-
Harrison, S. & Hastings, A. (1996) Genetic and evolutionary consequences of metapopulation structure. Trends in Ecology and Evolution, 11, 180-183.
-
(1996)
Trends in Ecology and Evolution
, vol.11
, pp. 180-183
-
-
Harrison, S.1
Hastings, A.2
-
25
-
-
84883816660
-
Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding
-
Ji, Y., Ashton, L., Pedley, S.M. etal. (2013) Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding. Ecology Letters, 16, 1245-1257.
-
(2013)
Ecology Letters
, vol.16
, pp. 1245-1257
-
-
Ji, Y.1
Ashton, L.2
Pedley, S.M.3
-
26
-
-
33244480197
-
Marine nematode biodiversity
-
ed. by Z.-X. Chen, S.-Y. Chen and D.W. Dickson) -. Tsinghua University Press, Tsinghua.
-
Lambshead, P.J.D. (2004) Marine nematode biodiversity. Nematode morphology, physiology and ecology (ed. by Z.-X. Chen, S.-Y. Chen and D.W. Dickson ), pp. 438-492. Tsinghua University Press, Tsinghua.
-
(2004)
Nematode morphology, physiology and ecology
, pp. 438-492
-
-
Lambshead, P.J.D.1
-
27
-
-
0038025581
-
Marine nematode deep-sea biodiversity - hyperdiverse or hype?
-
Lambshead, P.J.D. & Boucher, G. (2003) Marine nematode deep-sea biodiversity - hyperdiverse or hype? Journal of Biogeography, 30, 475-485.
-
(2003)
Journal of Biogeography
, vol.30
, pp. 475-485
-
-
Lambshead, P.J.D.1
Boucher, G.2
-
28
-
-
84898791782
-
Patterns of rare and abundant marine microbial eukaryotes
-
Logares, R., Audic, S., Bass, D. etal. (2014) Patterns of rare and abundant marine microbial eukaryotes. Current Biology, 24, 813-821.
-
(2014)
Current Biology
, vol.24
, pp. 813-821
-
-
Logares, R.1
Audic, S.2
Bass, D.3
-
29
-
-
80052310753
-
How many species are there on Earth and in the ocean?
-
Mora, C., Tittensor, D.P., Adl, S., Simpson, A.G.B. & Worm, B. (2011) How many species are there on Earth and in the ocean? PLoS Biology, 9, e1001127.
-
(2011)
PLoS Biology
, vol.9
, pp. e1001127
-
-
Mora, C.1
Tittensor, D.P.2
Adl, S.3
Simpson, A.G.B.4
Worm, B.5
-
30
-
-
0033404204
-
The distance decay of similarity in biogeography and ecology
-
Nekola, J. & White, P. (1999) The distance decay of similarity in biogeography and ecology. Journal of Biogeography, 26, 867-878.
-
(1999)
Journal of Biogeography
, vol.26
, pp. 867-878
-
-
Nekola, J.1
White, P.2
-
31
-
-
85028099253
-
-
vegan: community ecology package. Available at:
-
Oksanen, J., Kindt, R., Legendre, P., O'Hara, B., Stevens, M. & Oksanen, M. (2010) vegan: community ecology package. Available at: http://cran.r-project.org/web/packages/vegan
-
(2010)
-
-
Oksanen, J.1
Kindt, R.2
Legendre, P.3
O'Hara, B.4
Stevens, M.5
Oksanen, M.6
-
32
-
-
0028164409
-
Genetic divergence, reproductive isolation, and marine speciation
-
Palumbi, S.R. (1994) Genetic divergence, reproductive isolation, and marine speciation. Annual Review of Ecology and Systematics, 25, 547-572.
-
(1994)
Annual Review of Ecology and Systematics
, vol.25
, pp. 547-572
-
-
Palumbi, S.R.1
-
33
-
-
84861675533
-
Exploring the role of environmental variables in shaping patterns of seabed biodiversity composition in regional-scale ecosystems
-
Pitcher, R.C., Lawton, P., Ellis, N., Smith, S.J., Incze, L.S., Wei, C.-L., Greenlaw, M.E., Wolff, N.H., Sameoto, J.A. & Snelgrove, P.V.R. (2012) Exploring the role of environmental variables in shaping patterns of seabed biodiversity composition in regional-scale ecosystems. Journal of Applied Ecology, 49, 670-679.
-
(2012)
Journal of Applied Ecology
, vol.49
, pp. 670-679
-
-
Pitcher, R.C.1
Lawton, P.2
Ellis, N.3
Smith, S.J.4
Incze, L.S.5
Wei, C.-L.6
Greenlaw, M.E.7
Wolff, N.H.8
Sameoto, J.A.9
Snelgrove, P.V.R.10
-
35
-
-
70349915703
-
Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity
-
Porazinska, D.L., Giblin-Davis, R.M., Faller, L., Farmerie, W., Kanzaki, N., Morris, K., Powers, T.O., Tucker, A.E., Sung, W. & Thomas, W.K. (2009) Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity. Molecular Ecology Resources, 9, 1439-1450.
-
(2009)
Molecular Ecology Resources
, vol.9
, pp. 1439-1450
-
-
Porazinska, D.L.1
Giblin-Davis, R.M.2
Faller, L.3
Farmerie, W.4
Kanzaki, N.5
Morris, K.6
Powers, T.O.7
Tucker, A.E.8
Sung, W.9
Thomas, W.K.10
-
36
-
-
79251565226
-
Removing noise from pyrosequenced amplicons
-
Quince, C., Lanzen, A., Davenport, R.J. & Turnbaugh, P.J. (2011) Removing noise from pyrosequenced amplicons. BMC Bioinformatics, 12, 38.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 38
-
-
Quince, C.1
Lanzen, A.2
Davenport, R.J.3
Turnbaugh, P.J.4
-
37
-
-
0000625869
-
Analyzing tables of statistical tests
-
Rice, W.R. (1988) Analyzing tables of statistical tests. Evolution, 43, 223-225.
-
(1988)
Evolution
, vol.43
, pp. 223-225
-
-
Rice, W.R.1
-
38
-
-
0033865420
-
Metazoan meiobenthos along continental margins: a review
-
Soltwedel, T. (2000) Metazoan meiobenthos along continental margins: a review. Progress in Oceanography, 46, 59-84.
-
(2000)
Progress in Oceanography
, vol.46
, pp. 59-84
-
-
Soltwedel, T.1
-
39
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck, T., Bass, D., Nebel, M., Christen, R., Jones, M.D.M., Breiner, H.-W. & Richards, T.A. (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Molecular Ecology, 19, 21-31.
-
(2010)
Molecular Ecology
, vol.19
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
Christen, R.4
Jones, M.D.M.5
Breiner, H.-W.6
Richards, T.A.7
-
40
-
-
84859598363
-
Towards next-generation biodiversity assessment using DNA metabarcoding
-
Taberlet, P., Coissac, E., Pompanon, F., Brochmann, C. & Willerslev, E. (2012) Towards next-generation biodiversity assessment using DNA metabarcoding. Molecular Ecology, 21, 2045-2050.
-
(2012)
Molecular Ecology
, vol.21
, pp. 2045-2050
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
Brochmann, C.4
Willerslev, E.5
-
41
-
-
84861563592
-
Monitoring endangered freshwater biodiversity using environmental DNA
-
Thomsen, P.F., Kielgast, J., Iversen, L.L., Wiuf, C., Rasmussen, M., Gilbert, M.T.P., Orlando, L. & Willerslev, E. (2012) Monitoring endangered freshwater biodiversity using environmental DNA. Molecular Ecology, 21, 2565-2573.
-
(2012)
Molecular Ecology
, vol.21
, pp. 2565-2573
-
-
Thomsen, P.F.1
Kielgast, J.2
Iversen, L.L.3
Wiuf, C.4
Rasmussen, M.5
Gilbert, M.T.P.6
Orlando, L.7
Willerslev, E.8
-
42
-
-
0020346563
-
-
Monographs in Population Biology 17. Princeton University Press, Princeton, NJ.
-
Tilman, D. (1982) Resource competition and community structure. Monographs in Population Biology 17. Princeton University Press, Princeton, NJ.
-
(1982)
Resource competition and community structure
-
-
Tilman, D.1
-
43
-
-
0027089264
-
Biological diversity and ecological redundancy
-
Walker, B.H. (1992) Biological diversity and ecological redundancy. Conservation Biology, 6, 18-23.
-
(1992)
Conservation Biology
, vol.6
, pp. 18-23
-
-
Walker, B.H.1
-
44
-
-
33749623164
-
DESS: a versatile solution for preserving morphology and extractable DNA of nematodes
-
Yoder, M., De Ley, I.T., King, I.W., Mundo-Ocampo, M., Mann, J., Blaxter, M., Poiras, L. & De Ley, P. (2006) DESS: a versatile solution for preserving morphology and extractable DNA of nematodes. Nematology, 8, 367-376.
-
(2006)
Nematology
, vol.8
, pp. 367-376
-
-
Yoder, M.1
De Ley, I.T.2
King, I.W.3
Mundo-Ocampo, M.4
Mann, J.5
Blaxter, M.6
Poiras, L.7
De Ley, P.8
-
45
-
-
80052540333
-
Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems
-
Zinger, L., Amaral-Zettler, L.A., Fuhrman, J.A., Horner-Devine, M.C., Huse, S.M., Welch, D.B.M., Martiny, J.B.H., Sogin, M., Boetius, A. & Ramette, A. (2011) Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems. PLoS ONE, 6, e24570.
-
(2011)
PLoS ONE
, vol.6
, pp. e24570
-
-
Zinger, L.1
Amaral-Zettler, L.A.2
Fuhrman, J.A.3
Horner-Devine, M.C.4
Huse, S.M.5
Welch, D.B.M.6
Martiny, J.B.H.7
Sogin, M.8
Boetius, A.9
Ramette, A.10
|