메뉴 건너뛰기




Volumn 27, Issue 4, 2015, Pages 1725-1735

Phylogeographic assessment of panmictic Monostroma species from Kuroshio Coast, Japan, reveals sympatric speciation

Author keywords

Biological species; DNA barcoding; Kuroshio; Morphometry; nrDNA 18S; nrDNA ITS1; Phylogeny; Phylogeography; Sympatric speciation

Indexed keywords


EID: 85027932254     PISSN: 09218971     EISSN: 15735176     Source Type: Journal    
DOI: 10.1007/s10811-014-0452-x     Document Type: Article
Times cited : (3)

References (49)
  • 1
    • 0344613211 scopus 로고    scopus 로고
    • Ribosomal ITS sequences and plant phylogenetic inference
    • COI: 1:CAS:528:DC%2BD3sXovVWntbk%3D, PID: 14615184
    • Alvarez I, Wendel JF (2003) Ribosomal ITS sequences and plant phylogenetic inference. Mol Phylogenet Evol 29:417–434
    • (2003) Mol Phylogenet Evol , vol.29 , pp. 417-434
    • Alvarez, I.1    Wendel, J.F.2
  • 2
    • 0000826043 scopus 로고
    • Diversity of eukaryotic algae
    • Andersen RA (1992) Diversity of eukaryotic algae. Biodivers Conserv 1:267–292
    • (1992) Biodivers Conserv , vol.1 , pp. 267-292
    • Andersen, R.A.1
  • 3
    • 85007864112 scopus 로고
    • On the Monostroma found in Ise and Kikawa Bay
    • Arasaki S (1949) On the Monostroma found in Ise and Kikawa Bay. Nippon Suisan Gakkaishi 15:137–143
    • (1949) Nippon Suisan Gakkaishi , vol.15 , pp. 137-143
    • Arasaki, S.1
  • 4
    • 68949217646 scopus 로고    scopus 로고
    • Asexual life history by biflagellate zoids in Monostroma latissimum (Ulotrichales)
    • Bast F, Shimada S, Hiraoka M, Okuda K (2009a) Asexual life history by biflagellate zoids in Monostroma latissimum (Ulotrichales). Aquat Bot 91:213–218
    • (2009) Aquat Bot , vol.91 , pp. 213-218
    • Bast, F.1    Shimada, S.2    Hiraoka, M.3    Okuda, K.4
  • 5
    • 67349227892 scopus 로고    scopus 로고
    • Seasonality and thallus ontogeny of edible seaweed Monostroma latissimum (Kützing) Wittrock, (Chlorophyta, Monostromataceae) from Tosa Bay, Kochi, Japan
    • COI: 1:CAS:528:DC%2BD1MXmvVOhs7s%3D
    • Bast F, Shimada S, Hiraoka M, Okuda K (2009b) Seasonality and thallus ontogeny of edible seaweed Monostroma latissimum (Kützing) Wittrock, (Chlorophyta, Monostromataceae) from Tosa Bay, Kochi, Japan. Hydrobiologia 630:161–167
    • (2009) Hydrobiologia , vol.630 , pp. 161-167
    • Bast, F.1    Shimada, S.2    Hiraoka, M.3    Okuda, K.4
  • 6
    • 0000799005 scopus 로고
    • A critical survey of European taxa in Ulvales, part II: Ulva, Ulvaria, Monostroma, Kornmannia
    • Bliding C (1968) A critical survey of European taxa in Ulvales, part II: Ulva, Ulvaria, Monostroma, Kornmannia. Bot Notiser 121:535–629
    • (1968) Bot Notiser , vol.121 , pp. 535-629
    • Bliding, C.1
  • 7
    • 0031960250 scopus 로고    scopus 로고
    • Molecular and morphological analysis of Enteromorpha intestinalis and E. compressa (Chlorophyta) in the British Isles
    • COI: 1:CAS:528:DyaK1cXivFWms78%3D
    • Blomster J, Maggs CA, Stanhope MJ (1998) Molecular and morphological analysis of Enteromorpha intestinalis and E. compressa (Chlorophyta) in the British Isles. J Phycol 34:319–340
    • (1998) J Phycol , vol.34 , pp. 319-340
    • Blomster, J.1    Maggs, C.A.2    Stanhope, M.J.3
  • 8
    • 77957290887 scopus 로고
    • An investigation into the cytology and biology of the Ulvaceae
    • Carter N (1926) An investigation into the cytology and biology of the Ulvaceae. Ann Bot (Lond) 40:665–687
    • (1926) Ann Bot (Lond) , vol.40 , pp. 665-687
    • Carter, N.1
  • 9
    • 0030820048 scopus 로고    scopus 로고
    • Ribosomal ITS-1 and ITS-2 sequence comparisons as a tool for predicting genetic relatedness
    • COI: 1:CAS:528:DyaK2sXltFWntbc%3D, PID: 9236277
    • Coleman AW, Mai JC (1997) Ribosomal ITS-1 and ITS-2 sequence comparisons as a tool for predicting genetic relatedness. J Mol Evol 45:168–177
    • (1997) J Mol Evol , vol.45 , pp. 168-177
    • Coleman, A.W.1    Mai, J.C.2
  • 10
    • 0027950675 scopus 로고
    • Molecular Delineation of species and syngens in volvocacean green algae (chlorophyta) 1
    • Coleman AW, Suarez A, Goff L J (1994) Molecular Delineation of species and syngens in volvocacean green algae (chlorophyta) 1. J Phycol 30(1):80–90
    • (1994) J Phycol , vol.30 , Issue.1 , pp. 80-90
    • Coleman, A.W.1    Suarez, A.2    Goff, L.J.3
  • 11
    • 0034852933 scopus 로고    scopus 로고
    • Evolution of Macrocystis spp. (Phaeophyceae) as determined by ITS1 and ITS2 sequences
    • Coyer JA, Smith GJ, Anderson RA (2001) Evolution of Macrocystis spp. (Phaeophyceae) as determined by ITS1 and ITS2 sequences. J Phycol 37:574–585
    • (2001) J Phycol , vol.37 , pp. 574-585
    • Coyer, J.A.1    Smith, G.J.2    Anderson, R.A.3
  • 12
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11–15
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 13
    • 84903709077 scopus 로고    scopus 로고
    • Secondary structure analyses of the nuclear rRNA internal transcribed spacers and assessment of its phylogenetic utility across the Brassicaceae (mustards)
    • PID: 24984034
    • Edger PP, Michelle T, Kevin AB, Dustin RM, Gavin C, Klaus M, Marcus AK, Chris PJ (2014) Secondary structure analyses of the nuclear rRNA internal transcribed spacers and assessment of its phylogenetic utility across the Brassicaceae (mustards). PLoS One 9:e101341
    • (2014) PLoS One , vol.9 , pp. 101341
    • Edger, P.P.1    Michelle, T.2    Kevin, A.B.3    Dustin, R.M.4    Gavin, C.5    Klaus, M.6    Marcus, A.K.7    Chris, P.J.8
  • 14
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:137–195
    • (1985) Evolution , vol.39 , pp. 137-195
    • Felsenstein, J.1
  • 15
    • 0012142257 scopus 로고
    • Sur le démembrement de l’actual genre Monostroma Thuret (Chlorophycées, Ulotrichales s.l.)
    • Gayral P (1964) Sur le démembrement de l’actual genre Monostroma Thuret (Chlorophycées, Ulotrichales s.l.). CR Acad Sci Paris 258:2149–2152
    • (1964) CR Acad Sci Paris , vol.258 , pp. 2149-2152
    • Gayral, P.1
  • 17
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • PID: 14530136
    • Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 18
    • 0022376704 scopus 로고
    • Dating the human-ape split by a molecular clock of mitochondrial DNA
    • COI: 1:CAS:528:DyaL2MXmtFSns7g%3D, PID: 3934395
    • Hasegawa M, Kishino H, Yano T (1985) Dating the human-ape split by a molecular clock of mitochondrial DNA. J Mol Evol 22:160–174
    • (1985) J Mol Evol , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 19
    • 0036910939 scopus 로고    scopus 로고
    • Phylogenetic systematics of the Ulvaceae (Ulvales, Ulvophyceae) using chloroplast and nuclear DNA sequences
    • COI: 1:CAS:528:DC%2BD3sXms1ahsA%3D%3D
    • Hayden HS, Waaland JR (2002) Phylogenetic systematics of the Ulvaceae (Ulvales, Ulvophyceae) using chloroplast and nuclear DNA sequences. J Phycol 38:1200–1212
    • (2002) J Phycol , vol.38 , pp. 1200-1212
    • Hayden, H.S.1    Waaland, J.R.2
  • 21
    • 0026300584 scopus 로고
    • Ribosomal DNA: molecular evolution and phylogenetic inference
    • COI: 1:STN:280:DyaK387ltVKmsQ%3D%3D, PID: 1784710
    • Hillis DM, Dixon MT (1991) Ribosomal DNA: molecular evolution and phylogenetic inference. Q Rev Biol 66:411–453
    • (1991) Q Rev Biol , vol.66 , pp. 411-453
    • Hillis, D.M.1    Dixon, M.T.2
  • 22
    • 84988148536 scopus 로고
    • Comparative studies of pyrenoid ultrastructure in algae of the Monostroma complex
    • Hori T (1973) Comparative studies of pyrenoid ultrastructure in algae of the Monostroma complex. J Phycol 9:190–199
    • (1973) J Phycol , vol.9 , pp. 190-199
    • Hori, T.1
  • 23
    • 0035696159 scopus 로고    scopus 로고
    • Solving taxonomic and nomenclatural problems in Pacific Gigartinaceae (Rhodophyta) using DNA from type material
    • COI: 1:CAS:528:DC%2BD38XnsVyhuw%3D%3D
    • Hughey JR, Silva PC, Hommersand MH (2001) Solving taxonomic and nomenclatural problems in Pacific Gigartinaceae (Rhodophyta) using DNA from type material. J Phycol 37:1091–1109
    • (2001) J Phycol , vol.37 , pp. 1091-1109
    • Hughey, J.R.1    Silva, P.C.2    Hommersand, M.H.3
  • 24
    • 84869502036 scopus 로고    scopus 로고
    • World wide web document, URL: accessed on: 2009-11-06
    • JAMSTEC (2009) Japan Agency for Marine-Earth Science and Technology. World wide web document, URL: www.jamstec.go.jp/jamstec-e/earth/p2/p2-1.html accessed on: 2009-11-06
    • (2009) Japan Agency for Marine-Earth Science and Technology
  • 25
    • 84877587914 scopus 로고    scopus 로고
    • Species identification of imported and Japanese commercial green algal products based on phylogenetic analyses using the nrITS2 and 5S rDNA spacer regions
    • COI: 1:CAS:528:DC%2BC3sXnsVWgurc%3D
    • Kawashima Y, Akasaki T, Matsumoto Y, Yamazaki Y, Shimada S (2013) Species identification of imported and Japanese commercial green algal products based on phylogenetic analyses using the nrITS2 and 5S rDNA spacer regions. Fish Sci 79:521–529
    • (2013) Fish Sci , vol.79 , pp. 521-529
    • Kawashima, Y.1    Akasaki, T.2    Matsumoto, Y.3    Yamazaki, Y.4    Shimada, S.5
  • 26
    • 0038531504 scopus 로고
    • Culture of seaweeds Monostroma
    • Kida W (1990) Culture of seaweeds Monostroma. Mar Behav Physiol 16:109–131
    • (1990) Mar Behav Physiol , vol.16 , pp. 109-131
    • Kida, W.1
  • 27
    • 0027066305 scopus 로고
    • Biogeography of Cladophoropsis membranacea (Chlorophyta) based on comparisons of nuclear rDNA ITS sequences
    • COI: 1:CAS:528:DyaK3sXltFejs7w%3D
    • Kooistra WHCF, Stam WT, Olsen JL, van den Hoek C (1992) Biogeography of Cladophoropsis membranacea (Chlorophyta) based on comparisons of nuclear rDNA ITS sequences. J Phycol 28:660–668
    • (1992) J Phycol , vol.28 , pp. 660-668
    • Kooistra, W.H.C.F.1    Stam, W.T.2    Olsen, J.L.3    van den Hoek, C.4
  • 28
    • 0012215415 scopus 로고
    • On the life history of Monostroma
    • Kunieda H (1934) On the life history of Monostroma. Proc Imp Acad Tokyo 10:103–106
    • (1934) Proc Imp Acad Tokyo , vol.10 , pp. 103-106
    • Kunieda, H.1
  • 29
    • 0030474204 scopus 로고    scopus 로고
    • DNA sequence variation in the ribosomal internal transcribed spacer region of freshwater Cladophora species (Chlorophyta)
    • COI: 1:CAS:528:DyaK2sXnsVKqsg%3D%3D
    • Marks JC, Cummings MP (1996) DNA sequence variation in the ribosomal internal transcribed spacer region of freshwater Cladophora species (Chlorophyta). J Phycol 32:1035–1042
    • (1996) J Phycol , vol.32 , pp. 1035-1042
    • Marks, J.C.1    Cummings, M.P.2
  • 31
    • 1342290814 scopus 로고    scopus 로고
    • Phylogenetic position of Bolbocoleon piliferum (Ulvophyceae, Chlorophyta): evidence from reproduction, zoospore and gamete ultrastructure, and small subunit rRNA gene sequences
    • O’Kelly CJ, Bellows WK, Wysor B (2004) Phylogenetic position of Bolbocoleon piliferum (Ulvophyceae, Chlorophyta): evidence from reproduction, zoospore and gamete ultrastructure, and small subunit rRNA gene sequences. J Phycol 40:209–222
    • (2004) J Phycol , vol.40 , pp. 209-222
    • O’Kelly, C.J.1    Bellows, W.K.2    Wysor, B.3
  • 32
    • 84980082744 scopus 로고
    • On the genera of Ulvales and the status of the order
    • Papenfuss GF (1960) On the genera of Ulvales and the status of the order. J Linn Soc Bot 56:303–318
    • (1960) J Linn Soc Bot , vol.56 , pp. 303-318
    • Papenfuss, G.F.1
  • 33
    • 34250783658 scopus 로고    scopus 로고
    • RNAstrand: reading direction of structured RNAs in multiple sequence alignments
    • Reiche K, Stadler PF (2007) RNAstrand: reading direction of structured RNAs in multiple sequence alignments. Algorithm Mol Biol 2:6
    • (2007) Algorithm Mol Biol , vol.2 , pp. 6
    • Reiche, K.1    Stadler, P.F.2
  • 34
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • COI: 1:CAS:528:DC%2BD3sXntlKms7k%3D
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (Oxf) 19:1572–1574
    • (2003) Bioinformatics (Oxf) , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 35
    • 85028215297 scopus 로고    scopus 로고
    • Molecular systematic studies of several seaweeds in China, Ph.D. dissertation, Northeast Forestry University
    • Su Q (2002) Molecular systematic studies of several seaweeds in China, Ph.D. dissertation, Northeast Forestry University, China, 81 pp
    • (2002) China , pp. 81
    • Su, Q.1
  • 36
    • 0028354681 scopus 로고
    • A chloroplast group I intron undergoes the first step of reverse splicing into host cytoplasmic 5.8 S rRNA
    • COI: 1:CAS:528:DyaK2cXis1artb0%3D, PID: 8107133
    • Thompson AJ, Herrin DL (1994) A chloroplast group I intron undergoes the first step of reverse splicing into host cytoplasmic 5.8 S rRNA. J Mol Biol 236:455–468
    • (1994) J Mol Biol , vol.236 , pp. 455-468
    • Thompson, A.J.1    Herrin, D.L.2
  • 37
    • 0442310142 scopus 로고
    • Note sur la synonymie des Ulva lactuca et latissima L. suivie de quelques remarques sur la tribu des Ulvacées
    • Thuret G (1854) Note sur la synonymie des Ulva lactuca et latissima L. suivie de quelques remarques sur la tribu des Ulvacées. Mém Soc Sci Nat Cherbourg 2:17–32
    • (1854) Mém Soc Sci Nat Cherbourg , vol.2 , pp. 17-32
    • Thuret, G.1
  • 40
    • 0028337036 scopus 로고
    • Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct the formation of 17S and 26S rRNA
    • PID: 8152921
    • van Nues RW, Rientjes JMJ, van der Sande CAFM, Zerp SF, Sluiter C, Venema J, Planta RJ, Raué HA (1994) Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct the formation of 17S and 26S rRNA. Nucleic Acids Res 22:912–919
    • (1994) Nucleic Acids Res , vol.22 , pp. 912-919
    • van Nues, R.W.1    Rientjes, J.M.J.2    van der Sande, C.A.F.M.3    Zerp, S.F.4    Sluiter, C.5    Venema, J.6    Planta, R.J.7    Raué, H.A.8
  • 41
    • 0012139893 scopus 로고
    • Tracking trails by cracking codes. Molecular biogeography and evolution of benthic cold-water seaweeds. Ph.D. dissertation
    • van Oppen MJH (1995) Tracking trails by cracking codes. Molecular biogeography and evolution of benthic cold-water seaweeds. Ph.D. dissertation, Rijksuniversiteit Groningen, 163 pp
    • (1995) Rijksuniversiteit Groningen , pp. 163
    • van Oppen, M.J.H.1
  • 42
    • 0003821063 scopus 로고
    • Smooth-bladed Macrocystis (Laminariales, Phaeophyta) from the Falkland Islands
    • van Tussenbroek BI (1989) Smooth-bladed Macrocystis (Laminariales, Phaeophyta) from the Falkland Islands. Phycologia 28:520–523
    • (1989) Phycologia , vol.28 , pp. 520-523
    • van Tussenbroek, B.I.1
  • 43
    • 84989446394 scopus 로고
    • Nucleic acid sequence phylogeny and random outgroups
    • Wheeler WC (1990) Nucleic acid sequence phylogeny and random outgroups. Cladistics 6:363–367
    • (1990) Cladistics , vol.6 , pp. 363-367
    • Wheeler, W.C.1
  • 44
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Innis M, Gelfand J, Sninsky J, White T, (eds), Academic, Orlando
    • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M, Gelfand J, Sninsky J, White T (eds) PCR protocols: a guide to methods and applications. Academic, Orlando, pp 315–322
    • (1990) PCR protocols : a guide to methods and applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 45
    • 67349213371 scopus 로고
    • Försök till en monographi öfver algslägtet Monostroma. Ph.D. dissertation, Uppsala University
    • Wittrock VB (1866) Försök till en monographi öfver algslägtet Monostroma. Ph.D. dissertation, Uppsala University, Sweden, 66 pp
    • (1866) Sweden , pp. 66
    • Wittrock, V.B.1
  • 46
    • 0028214103 scopus 로고
    • Estimating the pattern of nucleotide substitution
    • PID: 8064867
    • Yang Z (1994a) Estimating the pattern of nucleotide substitution. J Mol Evol 39:105–111
    • (1994) J Mol Evol , vol.39 , pp. 105-111
    • Yang, Z.1
  • 47
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods
    • COI: 1:CAS:528:DyaK2cXmt1eit7c%3D, PID: 7932792
    • Yang Z (1994b) Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J Mol Evol 39:306–314
    • (1994) J Mol Evol , vol.39 , pp. 306-314
    • Yang, Z.1
  • 48
    • 2442691387 scopus 로고
    • Notes on algae new to Japan, part VII
    • Yendo K (1917) Notes on algae new to Japan, part VII. Bot Mag 31:183–188
    • (1917) Bot Mag , vol.31 , pp. 183-188
    • Yendo, K.1
  • 49
    • 0003723498 scopus 로고    scopus 로고
    • Uchida Rokahuko Publishing, Tokyo: 1222 pp
    • Yoshida T (1998) Marine algae of Japan. Uchida Rokahuko Publishing, Tokyo, 1222 pp
    • (1998) Marine algae of Japan
    • Yoshida, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.