Molecular cloning, promoter analysis, and expression profile of VvERF3b gene in Vitis vinifera

Biologia Plantarum

Volumn 56, Issue 1, 2012, Pages 31-36

  Song, Y ^a   Lin, Y ^a   Tong, S ^a   Hou, H ^a  

^a LIAONING NORMAL UNIVERSITY   (China)

Author keywords

abscisic acid; cis acting elements; ethephon; ethylene response factor; salicylic acid

Indexed keywords

VITACEAE; VITIS VINIFERA;

EID: 85027927550     PISSN: 00063134     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10535-012-0012-7     Document Type: Article

References (36)

1. Agarwal, P. K., Jha, B.: Transcription factors in plants and ABA dependent and independent abiotic stress signalling. - Biol. Plant. 54: 201-212, 2010.
2. Allen, M. D., Yamasaki, K., Ohme-Takagi, M., Tateno, M., Suzuki, M.: A novel mode of DNA recognition by a betasheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. - EMBO J. 17: 5484-5496, 1998.
3. Berrocal-Lobo, M., Molina, A., Solano, R.: Constitutive expression of ETHYLENE-RESPONSE-FACTOR1 in Arabidopsis confers resistance to several necrotrophic fungi. - Plant J. 29: 23-32, 2002.
4. Chakravarthy, S., Tuori, R. P., D'Ascenzo, M. D., Fobert, P. R., Despres, C., Martin, G. B.: The tomato transcription factor Pti4 regulates defense-related gene expression via GCC box and non-GCC box cis-elements. - Plant Cell 15: 3033-3050, 2003.
5. Champion, A., Hebrard, E., Parra, B., Bournaud, C., Marmey, P., Tranchant, C., Nicole, M.: Molecular diversity and gene expression of cotton ERF transcription factors reveal that group IXa members are responsive to jasmonate, ethylene and Xanthomonas. - Mol. Plant Pathol. 10: 471-485, 2009.
6. Cheong, Y. H., Chang, H. S., Gupta, R., Wang, X., Zhu, T., Luan, S.: Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. - Plant Physiol. 129: 661-677, 2002.
7. Fujimoto, S. Y., Ohta, M., Usui, A., Shinshi, H., Ohme-Takagi, M.: Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC boxmediated gene expression. - Plant Cell 12: 393-404, 2000.
8. Guillemaut, P., Maréchal-Drouard, L.: Isolation of plant DNA: a fast, inexpensive, and reliable method. - Plant mol. Biol. Rep. 10: 60-65, 1992.
9. Hao, D., Ohme-Takagi, M., Sarai, A.: Unique mode of GCC box recognition by the DNA-binding domain of ethyleneresponsive element-binding factor (ERF domain) in plant. - J. biol. Chem. 273: 26857-26861, 1998.
10. Higo, K., Ugawa, Y., Iwamoto, M., Korenaga, T.: Plant cisacting regulatory DNA elements (PLACE) database: 1999. - Nucl. Acids Res. 27: 297-300, 1999.
11. Hu, Y., Zhao, L., Chong, K., Wang, T.: Overexpression of OsERF1, a novel rice ERF gene, up-regulates ethyleneresponsive genes expression besides affects growth and development in Arabidopsis. - J. Plant Physiol. 165: 1717-1725, 2008.
12. Jin, L. G., Liu, J. Y.: Molecular cloning, expression profile and promoter analysis of a novel ethylene responsive transcription factor gene GhERF4 from cotton (Gossypium hirstum). - Plant Physiol. Biochem. 46: 46-53, 2008.
13. Lenochová, Z., Soukup, A., Votrubová, O.: Aerenchyma formation in maize roots. - Biol. Plant. 53: 263-270, 2009.
14. Liang, H., Lu, Y., Liu, H., Wang, F., Xin, Z., Zhang, Z.: A novel activator-type ERF of Thinopyrum intermedium, TiERF1, positively regulates defence responses. - J. exp. Bot. 59: 3111-3120, 2008.
15. Lorenzo, O., Piqueras, R., Sanchez-Serrano, J. J., Solano, R.: ETHYLENE RESPONSE FACTOR1 integrates signals from ethylene and jasmonate pathways in plant defense. - Plant Cell 15: 165-178, 2003.
16. Nakano, T., Suzuki, K., Fujimura, T., Shinshi, H.: Genome-wide analysis of the ERF gene family in Arabidopsis and rice. - Plant Physiol. 140: 411-432, 2006.
17. Ohme-Takagi, M., Shinshi, H.: Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element. - Plant Cell 7: 173-182, 1995.
18. Ohta, M., Matsui, K., Hiratsu, K., Shinshi, H., Ohme-Takagi, M.: Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. - Plant Cell 13: 1959-1968, 2001.
19. Onate-Sanchez, L., Singh, K. B.: Identification of Arabidopsis ethylene-responsive element binding factors with distinct induction kinetics after pathogen infection. - Plant Physiol. 128: 1313-1322, 2002.
20. Pandey, G. K., Grant, J. J., Cheong, Y. H., Kim, B. G., Li, L., Luan, S.: ABR1, an APETALA2-domain transcription factor that functions as a repressor of ABA response in Arabidopsis. - Plant Physiol. 139: 1185-1193, 2005.
21. Pirrello, J., Jaimes-Miranda, F., Sanchez-Ballesta, M. T., Tournier, B., Khalil-Ahmad, Q., Regad, F., Latche, A., Pech, J. C., Bouzayen, M.: Sl-ERF2, a tomato ethylene response factor involved in ethylene response and seed germination. - Plant Cell Physiol. 47: 1195-1205, 2006.
22. Pre, M., Atallah, M., Champion, A., De Vos, M., Pieterse, C. M., Memelink, J.: The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense. - Plant Physiol. 147: 1347-1357, 2008.
23. Sakuma, Y., Liu, Q., Dubouzet, J. G., Abe, H., Shinozaki, K., Yamaguchi-Shinozaki, K.: DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression. - Biochem. Biophys. Res. Commun. 290: 998-1009, 2002.
24. Shahmuradov, I. A., Solovyev, V. V., Gammerman, A. J.: Plant promoter prediction with confidence estimation. - Nucleic Acids Res. 33: 1069-1076, 2005.
25. Song, C. P., Agarwal, M., Ohta, M., Guo, Y., Halfter, U., Wang, P., Zhu, J. K.: Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses. - Plant Cell 17: 2384-2396, 2005.
26. Tournier, B., Sanchez-Ballesta, M. T., Jones, B., Pesquet, E., Regad, F., Latche, A., Pech, J. C., Bouzayen, M.: New members of the tomato ERF family show specific expression pattern and diverse DNA-binding capacity to the GCC box element. - FEBS Lett. 550: 149-154, 2003.
27. van der Fits, L., Memelink, J.: The jasmonate-inducible AP2/ERF-domain transcription factor ORCA3 activates gene expression via interaction with a jasmonate-responsive promoter element. - Plant J. 25: 43-53, 2001.
28. Wu, K., Tian, L., Hollingworth, J., Brown, D. C., Miki, B.: Functional analysis of tomato Pti4 in Arabidopsis. - Plant Physiol. 128: 30-37, 2002.
29. Wu, L., Zhang, Z., Zhang, H., Wang, X. C., Huang, R.: Transcriptional modulation of ethylene response factor protein JERF3 in the oxidative stress response enhances tolerance of tobacco seedlings to salt, drought, and freezing. - Plant Physiol. 148: 1953-1963, 2008.
30. Yanagisawa, S., Yoo, S. D., Sheen, J.: Differential regulation of EIN3 stability by glucose and ethylene signalling in plants. - Nature 425: 521-525, 2003.
31. Yang, Z., Tian, L., Latoszek-Green, M., Brown, D., Wu, K.: Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. - Plant mol. Biol. 58: 585-596, 2005.
32. Yoo, S. D., Cho, Y. H., Sheen, J.: Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis. - Nature Protocols 2: 1565-1572, 2007.
33. Zhang, G., Chen, M., Li, L., Xu, Z., Chen, X., Guo, J., Ma, Y.: Overexpression of the soybean GmERF3 gene, an AP2/ERF type transcription factor for increased tolerances to salt, drought, and diseases in transgenic tobacco. - J. exp. Bot. 60: 3781-3796, 2009.
34. Zhang, G. X., Yuan, B. M., Xu, P. R., Xue, L. X.: [Modified touchdown PCR efficiently improves specificity of PCR.] - J. Zhengzhou Univ. 38: 352-354, 2003. [In Chin.].
35. Zhang, H., Huang, Z., Xie, B., Chen, Q., Tian, X., Zhang, X., Zhang, H., Lu, X., Huang, D., Huang, R.: The ethylene-, jasmonate-, abscisic acid- and NaCl-responsive tomato transcription factor JERF1 modulates expression of GCC box-containing genes and salt tolerance in tobacco. - Planta 220: 262-270, 2004.
36. Zhang, J. J., Wang, Y. J., Wang, X. P., Yang, K. Q., Yang, J. X.: An improved method for rapidly extracting total RNA from Vitis. - J. Fruit Sci. 20: 178-181, 2003.