The tomato expression atlas

Bioinformatics

Volumn 33, Issue 15, 2017, Pages 2397-2398

  Fernandez Pozo, Noe ^a   Zheng, Yi ^a   Snyder, Stephen I ^b   Nicolas, Philippe ^a   Shinozaki, Yoshihito ^b   Fei, Zhangjun ^a,c   Catala, Carmen ^a,b   Giovannoni, James J ^a,c   Rose, Jocelyn K C ^b   Mueller, Lukas A ^a  

^a Boyce Thompson Institute for Plant Research   (United States)

^b Cornell University ^*  (United States)

^c ROBERT W HOLLEY CENTER FOR AGRICULTURE AND HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

ANTIBODY SPECIFICITY; GENE EXPRESSION REGULATION; GENETICS; HIGH THROUGHPUT SEQUENCING; NUCLEIC ACID DATABASE; PROCEDURES; SEQUENCE ANALYSIS; TOMATO;

DATABASES, NUCLEIC ACID; GENE EXPRESSION REGULATION, PLANT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; LYCOPERSICON ESCULENTUM; ORGAN SPECIFICITY; SEQUENCE ANALYSIS, RNA; TRANSCRIPTOME;

EID: 85026415828     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btx190     Document Type: Article

References (5)

1. Altschul, S.F. et al. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
2. Fernandez-Pozo, N. et al. (2015) The Sol Genomics Network (SGN)-from genotype to phenotype to breeding. Nucleic Acids Res., 43, D1036-D1041.
3. Martin, L.B.B. et al. (2016) Laser microdissection of tomato fruit cell and tissue types for transcriptome profiling. Nat. Protoc., 11, 2376-2388.
4. Thimm, O. et al. (2004) MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J., 37, 914-939.
5. Winter, D. et al. (2007) An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets. PLoS One, 2, e718.