-
2
-
-
85020269945
-
-
9th ed. American Association of Cereal Chemists, St. Paul, MN
-
Amylose Content of Milled Rice. 9th ed. American Association of Cereal Chemists, St. Paul, MN
-
Amylose Content of Milled Rice
-
-
-
3
-
-
84941105366
-
SNPSeek database of SNPs derived from 3000 rice genomes
-
Alexandrov, N., S. Tai, W. Wang, L. Mansueto, K. Palis et al., 2014 SNPSeek database of SNPs derived from 3000 rice genomes. Nucleic Acids Res. 43: D1023-D1027
-
(2014)
Nucleic Acids Res
, vol.43
, pp. D1023-D1027
-
-
Alexandrov, N.1
Tai, S.2
Wang, W.3
Mansueto, L.4
Palis, K.5
-
4
-
-
84885948797
-
Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding
-
Bandillo, N., C. Raghavan, P. A. Muyco, M. A. L. Sevilla, I. T. Lobina et al., 2013 Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding. Rice (N. Y.) 6: 11-15
-
(2013)
Rice (N. Y.)
, vol.6
, pp. 11-15
-
-
Bandillo, N.1
Raghavan, C.2
Muyco, P.A.3
Sevilla, M.A.L.4
Lobina, I.T.5
-
5
-
-
84876367781
-
Marker density and read depth for genotyping populations using genotyping-by-sequencing
-
Beissinger, T. M., C. N. Hirsch, R. S. Sekhon, J. M. Foerster, J. M. Johnson et al., 2013 Marker density and read depth for genotyping populations using genotyping-by-sequencing. Genetics 193: 1073-1081
-
(2013)
Genetics
, vol.193
, pp. 1073-1081
-
-
Beissinger, T.M.1
Hirsch, C.N.2
Sekhon, R.S.3
Foerster, J.M.4
Johnson, J.M.5
-
6
-
-
4644280315
-
Molecular dissection of the relationships among tiller number, plant height and heading date in rice
-
Cui, K., S. Peng, Y. Ying, S. Yu, and C. Xu, 2004 Molecular dissection of the relationships among tiller number, plant height and heading date in rice. Plant Prod. Sci. 7: 309-318
-
(2004)
Plant Prod. Sci
, vol.7
, pp. 309-318
-
-
Cui, K.1
Peng, S.2
Ying, Y.3
Yu, S.4
Xu, C.5
-
7
-
-
79955783956
-
A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species
-
(L Orban, Ed.)
-
Elshire, R. J., J. C. Glaubitz, Q. Sun, J. A. Poland, K. Kawamoto et al., 2011 A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species (L. Orban, Ed.). PLoS One 6: e19379
-
(2011)
PLoS One
, vol.6
-
-
Elshire, R.J.1
Glaubitz, J.C.2
Sun, Q.3
Poland, J.A.4
Kawamoto, K.5
-
8
-
-
33645409862
-
GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein
-
Fan, C., Y. Xing, H. Mao, T. Lu, B. Han et al., 2006 GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor. Appl. Genet. 112: 1164-1171
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 1164-1171
-
-
Fan, C.1
Xing, Y.2
Mao, H.3
Lu, T.4
Han, B.5
-
9
-
-
84911873194
-
Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice
-
Gao, H., M. Jin, X.-M. Zheng, J. Chen, D. Yuan et al., 2014 Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice. Proc. Natl. Acad. Sci. USA 111: 16337-16342
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 16337-16342
-
-
Gao, H.1
Jin, M.2
Zheng, X.-M.3
Chen, J.4
Yuan, D.5
-
10
-
-
84896496737
-
TASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline
-
Glaubitz, J. C., T. M. Casstevens, F. Lu, J. Harriman, R. J. Elshire et al., 2014 TASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline. PLoS One 9: e90346
-
(2014)
PLoS One
, vol.9
-
-
Glaubitz, J.C.1
Casstevens, T.M.2
Lu, F.3
Harriman, J.4
Elshire, R.J.5
-
11
-
-
84954500296
-
Mapping additional QTLs from FR13A to increase submergence tolerance in rice beyond SUB1
-
Gonzaga, Z. J. C., J. Carandang, D. L. Sanchez, D. J. Mackill, and E. M. Septiningsih, 2016 Mapping additional QTLs from FR13A to increase submergence tolerance in rice beyond SUB1. Euphytica 209: 627-636
-
(2016)
Euphytica
, vol.209
, pp. 627-636
-
-
Gonzaga, Z.J.C.1
Carandang, J.2
Sanchez, D.L.3
Mackill, D.J.4
Septiningsih, E.M.5
-
12
-
-
0031908205
-
A high-density rice genetic linkage map with 2275 markers using a single F2 population
-
Harushima, Y., M. Yano, A. Shomura, M. Sato, T. Shimano et al., 1998 A high-density rice genetic linkage map with 2275 markers using a single F2 population. Genetics 148: 479-494
-
(1998)
Genetics
, vol.148
, pp. 479-494
-
-
Harushima, Y.1
Yano, M.2
Shomura, A.3
Sato, M.4
Shimano, T.5
-
13
-
-
79951983365
-
R/mpMap: a computational platform for the genetic analysis of multiparent recombinant inbred lines
-
Huang, B. E., and A. W. George, 2011 R/mpMap: a computational platform for the genetic analysis of multiparent recombinant inbred lines. Bioinformatics 27: 727-729
-
(2011)
Bioinformatics
, vol.27
, pp. 727-729
-
-
Huang, B.E.1
George, A.W.2
-
14
-
-
84864509188
-
A multiparent advanced generation inter-cross population for genetic analysis in wheat
-
Huang, B. E., A. W. George, K. L. Forrest, A. Kilian, M. J. Hayden et al., 2012 A multiparent advanced generation inter-cross population for genetic analysis in wheat. Plant Biotechnol. J. 10: 826-839
-
(2012)
Plant Biotechnol. J
, vol.10
, pp. 826-839
-
-
Huang, B.E.1
George, A.W.2
Forrest, K.L.3
Kilian, A.4
Hayden, M.J.5
-
15
-
-
84901350188
-
Efficient imputation of missing markers in low-coverage genotyping-by-sequencing data from multiparental crosses
-
Huang, B. E., C. Raghavan, R. Mauleon, K. W. Broman, and H. Leung, 2014 Efficient imputation of missing markers in low-coverage genotyping-by-sequencing data from multiparental crosses. Genetics 197: 401-404
-
(2014)
Genetics
, vol.197
, pp. 401-404
-
-
Huang, B.E.1
Raghavan, C.2
Mauleon, R.3
Broman, K.W.4
Leung, H.5
-
16
-
-
84937759091
-
MAGIC populations in crops: current status and future prospects
-
Huang, B. E., K. L. Verbyla, A. P. Verbyla, C. Raghavan, V. K. Singh et al., 2015 MAGIC populations in crops: current status and future prospects. Theor. Appl. Genet. 128: 999-1017
-
(2015)
Theor. Appl. Genet
, vol.128
, pp. 999-1017
-
-
Huang, B.E.1
Verbyla, K.L.2
Verbyla, A.P.3
Raghavan, C.4
Singh, V.K.5
-
17
-
-
66449120272
-
Highthroughput genotyping by whole-genome resequencing
-
Huang, X., Q. Feng, Q. Qian, Q. Zhao, L. Wang et al., 2009 Highthroughput genotyping by whole-genome resequencing. Genome Res. 19: 1068-1076
-
(2009)
Genome Res
, vol.19
, pp. 1068-1076
-
-
Huang, X.1
Feng, Q.2
Qian, Q.3
Zhao, Q.4
Wang, L.5
-
18
-
-
0003763699
-
-
Ed. 4. IRRI, Manila, Philippines
-
IRRI (International Rice Research Institute), 1996 Standard Evaluation System for Rice, Ed. 4. IRRI, Manila, Philippines
-
(1996)
Standard Evaluation System for Rice
-
-
-
19
-
-
84948407717
-
Allele mining and enhanced genetic recombination for rice breeding
-
Leung,H., C. Raghavan, B. Zhou, R. Oliva, I. R.Choi et al., 2015 Allele mining and enhanced genetic recombination for rice breeding. Rice (N. Y.) 8: 34
-
(2015)
Rice (N. Y.)
, vol.8
, pp. 34
-
-
Leung, H.1
Raghavan, C.2
Zhou, B.3
Oliva, R.4
Choi, I.R.5
-
20
-
-
0033929144
-
Analyzing quantitative trait loci for yield using a vegetatively replicated F2 population from a cross between the parents of an elite rice hybrid
-
Li, X. J., B. S. Yu, G. C. Xu, F. Y. Tan, J. Y. Gao et al., 2000 Analyzing quantitative trait loci for yield using a vegetatively replicated F2 population from a cross between the parents of an elite rice hybrid. Theor. Appl. Genet. 101: 248-254
-
(2000)
Theor. Appl. Genet
, vol.101
, pp. 248-254
-
-
Li, X.J.1
Yu, B.S.2
Xu, G.C.3
Tan, F.Y.4
Gao, J.Y.5
-
21
-
-
0036219762
-
Identification and characterization of a quantitative trait locus, Hd9, controlling heading date in rice
-
Lin, H., M. Ashikari, U. Yamanouchi, T. Sasaki, and M. Yano, 2002 Identification and characterization of a quantitative trait locus, Hd9, controlling heading date in rice. Breed. Sci. 52: 35-41
-
(2002)
Breed. Sci
, vol.52
, pp. 35-41
-
-
Lin, H.1
Ashikari, M.2
Yamanouchi, U.3
Sasaki, T.4
Yano, M.5
-
22
-
-
84866467273
-
GAPIT: genome association and prediction integrated tool
-
Lipka, A. E., F. Tian, Q. Wang, J. Peiffer, M. Li et al., 2012 GAPIT: genome association and prediction integrated tool. Bioinformatics 28: 2397-2399
-
(2012)
Bioinformatics
, vol.28
, pp. 2397-2399
-
-
Lipka, A.E.1
Tian, F.2
Wang, Q.3
Peiffer, J.4
Li, M.5
-
23
-
-
84907907739
-
An eight-parent multiparent advanced generation inter-cross population for winter-sown wheat: creation, properties, and validation
-
Mackay, I. J., P. Bansept-Basler, T. Barber, A. R. Bentley, J. Cockram et al., 2014 An eight-parent multiparent advanced generation inter-cross population for winter-sown wheat: creation, properties, and validation. G3 (Bethesda) 4: 1603-1610
-
(2014)
G3 (Bethesda)
, vol.4
, pp. 1603-1610
-
-
Mackay, I.J.1
Bansept-Basler, P.2
Barber, T.3
Bentley, A.R.4
Cockram, J.5
-
24
-
-
68149145780
-
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice
-
McNally, K. L., K. L. Childs, R. Bohnert, R. M. Davidson, K. Zhao et al., 2009 Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proc. Natl. Acad. Sci. USA 106: 12273-12278
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 12273-12278
-
-
McNally, K.L.1
Childs, K.L.2
Bohnert, R.3
Davidson, R.M.4
Zhao, K.5
-
25
-
-
84934784329
-
A multiparental cross population for mapping QTL for agronomic traits in durum wheat (Triticum turgidum ssp. durum)
-
Milner, S. G., M. Maccaferri, B. E. Huang, P. Mantovani, A. Massi et al., 2015 A multiparental cross population for mapping QTL for agronomic traits in durum wheat (Triticum turgidum ssp. durum). Plant Biotechnol. J. 14: 735-748
-
(2015)
Plant Biotechnol. J
, vol.14
, pp. 735-748
-
-
Milner, S.G.1
Maccaferri, M.2
Huang, B.E.3
Mantovani, P.4
Massi, A.5
-
26
-
-
84947016925
-
Dissecting quantitative trait variation in the resequencing era: complementarity of bi-parental, multi-parental and association panels
-
Pascual, L., E.Albert,C. Sauvage, J.Duangjit, J. P. Bouchet et al., 2016 Dissecting quantitative trait variation in the resequencing era: complementarity of bi-parental, multi-parental and association panels. Plant Sci. 242: 120-130
-
(2016)
Plant Sci
, vol.242
, pp. 120-130
-
-
Pascual, L.1
Albert, E.2
Sauvage, C.3
Duangjit, J.4
Bouchet, J.P.5
-
27
-
-
84906972840
-
Construction of pseudomolecule sequences of the aus rice cultivar Kasalath for comparative genomics of Asian cultivated rice
-
Sakai, H., H. Kanamori, Y. Arai-Kichise, M. Shibata-Hatta, K. Ebana et al., 2014 Construction of pseudomolecule sequences of the aus rice cultivar Kasalath for comparative genomics of Asian cultivated rice. DNA Res. 21: 397-405
-
(2014)
DNA Res
, vol.21
, pp. 397-405
-
-
Sakai, H.1
Kanamori, H.2
Arai-Kichise, Y.3
Shibata-Hatta, M.4
Ebana, K.5
-
28
-
-
84923367894
-
Multi-parent advanced generation inter-cross in barley: high-resolution quantitative trait locus mapping for flowering time as a proof of concept
-
Sannemann, W., B. E. Huang, B. Mathew, and J. Léon, 2015 Multi-parent advanced generation inter-cross in barley: high-resolution quantitative trait locus mapping for flowering time as a proof of concept. Mol. Breed. 35: 1-16
-
(2015)
Mol. Breed
, vol.35
, pp. 1-16
-
-
Sannemann, W.1
Huang, B.E.2
Mathew, B.3
Léon, J.4
-
29
-
-
84928647244
-
Confirming a major QTL and finding additional loci responsible for field resistance to brown spot (Bipolaris oryzae) in rice
-
Sato, H., K. Matsumoto, C. Ota, T. Yamakawa, J. Kihara et al., 2015 Confirming a major QTL and finding additional loci responsible for field resistance to brown spot (Bipolaris oryzae) in rice. Breed. Sci. 65: 170-175
-
(2015)
Breed. Sci
, vol.65
, pp. 170-175
-
-
Sato, H.1
Matsumoto, K.2
Ota, C.3
Yamakawa, T.4
Kihara, J.5
-
30
-
-
84965187491
-
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica
-
Schatz, M. C., L. G. Maron, J. C. Stein, A. H. Wences, J. Gurtowski et al., 2014 Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica. Genome Biol. 15: 506
-
(2014)
Genome Biol
, vol.15
, pp. 506
-
-
Schatz, M.C.1
Maron, L.G.2
Stein, J.C.3
Wences, A.H.4
Gurtowski, J.5
-
31
-
-
84898878613
-
Applying genomics tools for breeding submergence tolerance in rice
-
John Wiley & Sons, Inc., New York
-
Septiningsih, E. M., B. C. Y. Collard, S. Heuer, and J. Bailey-Serres, 2013 Applying genomics tools for breeding submergence tolerance in rice, pp. 9-30 in Translational Genomics for Crop Breeding. John Wiley & Sons, Inc., New York
-
(2013)
Translational Genomics for Crop Breeding
, pp. 9-30
-
-
Septiningsih, E.M.1
Collard, B.C.Y.2
Heuer, S.3
Bailey-Serres, J.4
-
32
-
-
84870249046
-
Allelic variation for a candidate gene for GS7, responsible for grain shape in rice
-
Shao, G., X. Wei, M. Chen, S. Tang, J. Luo et al., 2012 Allelic variation for a candidate gene for GS7, responsible for grain shape in rice. Theor. Appl. Genet. 125: 1303-1312
-
(2012)
Theor. Appl. Genet
, vol.125
, pp. 1303-1312
-
-
Shao, G.1
Wei, X.2
Chen, M.3
Tang, S.4
Luo, J.5
-
33
-
-
80051579192
-
Meta-analysis of grain yield QTL identified during agricultural drought in grasses showed consensus
-
Swamy, B. P. M., P. Vikram, S. Dixit, H. U. Ahmed, and A. Kumar, 2011 Meta-analysis of grain yield QTL identified during agricultural drought in grasses showed consensus. BMC Genomics 12: 319
-
(2011)
BMC Genomics
, vol.12
, pp. 319
-
-
Swamy, B.P.M.1
Vikram, P.2
Dixit, S.3
Ahmed, H.U.4
Kumar, A.5
-
34
-
-
0037239254
-
Molecular genetics of submergence tolerance in rice: QTL analysis of key traits
-
Toojinda, T., M. Siangliw, S. Tragoonrung, and A. Vanavichit, 2003 Molecular genetics of submergence tolerance in rice: QTL analysis of key traits. Ann. Bot. 91: 243-253
-
(2003)
Ann. Bot
, vol.91
, pp. 243-253
-
-
Toojinda, T.1
Siangliw, M.2
Tragoonrung, S.3
Vanavichit, A.4
-
35
-
-
84864402692
-
Control of grain size, shape and quality by OsSPL16 in rice
-
Wang, S., K. Wu, Q. Yuan, X. Liu, Z. Liu et al., 2012 Control of grain size, shape and quality by OsSPL16 in rice. Nat. Genet. 44: 950-954
-
(2012)
Nat. Genet
, vol.44
, pp. 950-954
-
-
Wang, S.1
Wu, K.2
Yuan, Q.3
Liu, X.4
Liu, Z.5
-
36
-
-
57049139307
-
Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight
-
Weng, J., S. Gu, X. Wan, H. Gao, T. Guo et al., 2008 Isolation and initial characterization of GW5, a major QTL associated with rice grain width and weight. Cell Res. 18: 1199-1209
-
(2008)
Cell Res
, vol.18
, pp. 1199-1209
-
-
Weng, J.1
Gu, S.2
Wan, X.3
Gao, H.4
Guo, T.5
-
37
-
-
84871357790
-
OGRO: the overview of functionally characterized genes in rice online database
-
Yamamoto, E., J. Yonemaru, T. Yamamoto, and M. Yano, 2012 OGRO: the overview of functionally characterized genes in rice online database. Rice (N. Y.) 5: 26
-
(2012)
Rice (N. Y.)
, vol.5
, pp. 26
-
-
Yamamoto, E.1
Yonemaru, J.2
Yamamoto, T.3
Yano, M.4
-
38
-
-
84900026549
-
Effect of advanced intercrossing on genome structure and on the power to detect linked quantitative trait loci in a multi-parent population: a simulation study in rice
-
Yamamoto, E., H. Iwata, T. Tanabata, R. Mizobuchi, J.-I. Yonemaru et al., 2014 Effect of advanced intercrossing on genome structure and on the power to detect linked quantitative trait loci in a multi-parent population: a simulation study in rice. BMC Genet. 15: 50
-
(2014)
BMC Genet
, vol.15
, pp. 50
-
-
Yamamoto, E.1
Iwata, H.2
Tanabata, T.3
Mizobuchi, R.4
Yonemaru, J.-I.5
-
39
-
-
85047685837
-
Genetic control of flowering time in rice, short-day plant
-
Yano, M., S. Kojima, Y. Takahashi, H. Lin, and T. Sasaki, 2001 Genetic control of flowering time in rice, short-day plant. Plant Physiol. 127: 1425-1429
-
(2001)
Plant Physiol
, vol.127
, pp. 1425-1429
-
-
Yano, M.1
Kojima, S.2
Takahashi, Y.3
Lin, H.4
Sasaki, T.5
-
40
-
-
79952299301
-
Gains in QTL detection using an ultra-high density SNP map based on population sequencing relative to traditional RFLP/SSR markers
-
(H. Matsunami, Ed.)
-
Yu, H., W. Xie, J. Wang, Y. Xing, C. Xu et al., 2011 Gains in QTL detection using an ultra-high density SNP map based on population sequencing relative to traditional RFLP/SSR markers (H. Matsunami, Ed.). PLoS One 6: e17595
-
(2011)
PLoS One
, vol.6
-
-
Yu, H.1
Xie, W.2
Wang, J.3
Xing, Y.4
Xu, C.5
-
41
-
-
20144366003
-
The genomes of Oryza sativa: a history of duplications
-
Yu, J., J. Wang, W. Lin, S. Li, H. Li et al., 2005 The genomes of Oryza sativa: a history of duplications. PLoS Biol. 3: e38
-
(2005)
PLoS Biol
, vol.3
-
-
Yu, J.1
Wang, J.2
Lin, W.3
Li, S.4
Li, H.5
-
42
-
-
77950299137
-
Mixed linear model approach adapted for genome-wide association studies
-
Zhang, Z., E. Ersoz, C.-Q. Lai, R. J. Todhunter, H. K. Tiwari et al., 2010 Mixed linear model approach adapted for genome-wide association studies. Nat. Genet. 42: 355-360
-
(2010)
Nat. Genet
, vol.42
, pp. 355-360
-
-
Zhang, Z.1
Ersoz, E.2
Lai, C.-Q.3
Todhunter, R.J.4
Tiwari, H.K.5
|