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Volumn 546, Issue 7658, 2017, Pages 401-405

Genomic epidemiology reveals multiple introductions of Zika virus into the United States

(69)  Grubaugh, Nathan D a   Ladner, Jason T b   Kraemer, Moritz U G c,d,e   Dudas, Gytis f   Tan, Amanda L g   Gangavarapu, Karthik a   Wiley, Michael R b,h   White, Stephen i   Thézé, Julien c   Magnani, Diogo M j   Prieto, Karla b,h   Reyes, Daniel b,k   Bingham, Andrea M l   Paul, Lauren M g   Robles Sikisaka, Refugio a   Oliveira, Glenn l   Pronty, Darryl i   Barcellona, Carolyn M g   Metsky, Hayden C m   Baniecki, Mary Lynn m   more..


Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

EID: 85019748480     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature22400     Document Type: Article
Times cited : (259)

References (79)
  • 1
    • 85085225065 scopus 로고    scopus 로고
    • Zika virus and complications., World Health Organization
    • Zika virus and complications. World Health Organization http://www. who. int/ features/qa/zika/en/ (2016).
    • (2016)
  • 2
    • 84962055381 scopus 로고    scopus 로고
    • Zika virus: New clinical syndromes and its emergence in the Western hemisphere
    • Lazear, H. M. & Diamond, M. S. Zika virus: new clinical syndromes and its emergence in the Western hemisphere. J. Virol. 90, 4864-4875 (2016).
    • (2016) J. Virol. , vol.90 , pp. 4864-4875
    • Lazear, H.M.1    Diamond, M.S.2
  • 3
    • 84989166021 scopus 로고    scopus 로고
    • Local mosquito-borne transmission of Zika virus-Miami-Dade and Broward Counties, Florida, June-August 2016
    • Likos, A. et al. Local mosquito-borne transmission of Zika virus-Miami-Dade and Broward Counties, Florida, June-August 2016. MMWR Morb. Mortal. Wkly. Rep. 65, 1032-1038 (2016).
    • (2016) MMWR Morb. Mortal. Wkly. Rep. , vol.65 , pp. 1032-1038
    • Likos, A.1
  • 4
    • 85085222247 scopus 로고    scopus 로고
    • Mosquito-Borne Disease Surveillance.
    • Mosquito-Borne Disease Surveillance. Florida Department of Health http://www. floridahealth. gov/diseases-and-conditions/mosquito-borne-diseases/ surveillance. html (2017).
    • (2017) Florida Department of Health
  • 5
    • 84959270982 scopus 로고    scopus 로고
    • Zika virus spreads to new areas-region of the Americas, May 2015-January 2016
    • Hennessey, M., Fischer, M. & Staples, J. E. Zika virus spreads to new areas-region of the Americas, May 2015-January 2016. MMWR Morb. Mortal. Wkly. Rep. 65, 55-58 (2016).
    • (2016) MMWR Morb. Mortal. Wkly. Rep. , vol.65 , pp. 55-58
    • Hennessey, M.1    Fischer, M.2    Staples, J.E.3
  • 6
    • 84961653991 scopus 로고    scopus 로고
    • Zika virus in the Americas: Early epidemiological and genetic findings
    • Faria, N. R. et al. Zika virus in the Americas: early epidemiological and genetic findings. Science 352, 345-349 (2016).
    • (2016) Science , vol.352 , pp. 345-349
    • Faria, N.R.1
  • 7
    • 85019748469 scopus 로고    scopus 로고
    • Establishment and cryptic transmission of Zika virus in Brazil and the Americas
    • Faria, N. R. et al. Establishment and cryptic transmission of Zika virus in Brazil and the Americas. Nature http://dx. doi. org/10. 1038/nature22401 (2017).
    • (2017) Nature
    • Faria, N.R.1
  • 8
    • 85019697447 scopus 로고    scopus 로고
    • Zika virus evolution and spread in the Americas
    • Metsky, H. C. et al. Zika virus evolution and spread in the Americas. Nature http://dx. doi. org/10. 1038/nature22402 (2017).
    • (2017) Nature
    • Metsky, H.C.1
  • 9
    • 85085222879 scopus 로고    scopus 로고
    • Regional Zika Epidemiological Update (Americas). Pan American Health Organization
    • Regional Zika Epidemiological Update (Americas). Pan American Health Organization http://www. paho. org/hq/index. php?option=com- content&view=article&id=11599&Itemid=41691&lang=en (2016).
    • (2016)
  • 10
    • 84994275237 scopus 로고    scopus 로고
    • Vector competence of American mosquitoes for three strains of Zika virus
    • Weger-Lucarelli, J. et al. Vector competence of American mosquitoes for three strains of Zika virus. PLoS Negl. Trop. Dis. 10, e0005101 (2016).
    • (2016) PLoS Negl. Trop. Dis. , vol.10 , pp. e0005101
    • Weger-Lucarelli, J.1
  • 11
    • 84994693940 scopus 로고    scopus 로고
    • Outbreak of Zika virus infection, Chiapas State, Mexico, 2015, and first confirmed transmission by Aedes aegypti mosquitoes in the Americas
    • Guerbois, M. et al. Outbreak of Zika virus infection, Chiapas State, Mexico, 2015, and first confirmed transmission by Aedes aegypti mosquitoes in the Americas. J. Infect. Dis. 214, 1349-1356 (2016).
    • (2016) J. Infect. Dis. , vol.214 , pp. 1349-1356
    • Guerbois, M.1
  • 12
    • 84990190476 scopus 로고    scopus 로고
    • First detection of natural infection of Aedes aegypti with Zika virus in Brazil and throughout South America
    • Ferreira-de-Brito, A. et al. First detection of natural infection of Aedes aegypti with Zika virus in Brazil and throughout South America. Mem. Inst. Oswaldo Cruz 111, 655-658 (2016).
    • (2016) Mem. Inst. Oswaldo Cruz , vol.111 , pp. 655-658
    • Ferreira-De-Brito, A.1
  • 13
    • 84961261683 scopus 로고    scopus 로고
    • Differential susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika virus
    • Chouin-Carneiro, T. et al. Differential susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika virus. PLoS Negl. Trop. Dis. 10, e0004543 (2016).
    • (2016) PLoS Negl. Trop. Dis. , vol.10 , pp. e0004543
    • Chouin-Carneiro, T.1
  • 14
    • 84937064804 scopus 로고    scopus 로고
    • The global distribution of the arbovirus vectors Aedes aegypti and Ae. Albopictus
    • Kraemer, M. U. G. et al. The global distribution of the arbovirus vectors Aedes aegypti and Ae. albopictus. eLife 4, e08347 (2015).
    • (2015) ELife , vol.4 , pp. e08347
    • Kraemer, M.U.G.1
  • 15
    • 84979503090 scopus 로고    scopus 로고
    • Countering the Zika epidemic in Latin America
    • Ferguson, N. M. et al. Countering the Zika epidemic in Latin America. Science 353, 353-354 (2016).
    • (2016) Science , vol.353 , pp. 353-354
    • Ferguson, N.M.1
  • 16
    • 84927131717 scopus 로고    scopus 로고
    • Origin of the dengue virus outbreak in Martin County, Florida, USA 2013
    • Teets, F. D. et al. Origin of the dengue virus outbreak in Martin County, Florida, USA 2013. Virol. Rep. 1-2, 2-8 (2014).
    • (2014) Virol. Rep. , vol.1-2 , pp. 2-8
    • Teets, F.D.1
  • 17
    • 84930476482 scopus 로고    scopus 로고
    • Mosquito-associated dengue virus, Key West, Florida, USA, 2010
    • Graham, A. S. et al. Mosquito-associated dengue virus, Key West, Florida, USA, 2010. Emerg. Infect. Dis. 17, 2074-2075 (2011).
    • (2011) Emerg. Infect. Dis. , vol.17 , pp. 2074-2075
    • Graham, A.S.1
  • 18
    • 84915763088 scopus 로고    scopus 로고
    • Notes from the field: Transmission of chikungunya virus in the continental United States-Florida, 2014
    • Kendrick, K., Stanek, D. & Blackmore, C. Notes from the field: Transmission of chikungunya virus in the continental United States-Florida, 2014. MMWR Morb. Mortal. Wkly. Rep. 63, 1137 (2014).
    • (2014) MMWR Morb. Mortal. Wkly. Rep. , vol.63 , pp. 1137
    • Kendrick, K.1    Stanek, D.2    Blackmore, C.3
  • 19
    • 84859448390 scopus 로고    scopus 로고
    • Return of epidemic dengue in the United States: Implications for the public health practitioner
    • Bouri, N. et al. Return of epidemic dengue in the United States: implications for the public health practitioner. Public Health Rep. 127, 259-266 (2012).
    • (2012) Public Health Rep. , vol.127 , pp. 259-266
    • Bouri, N.1
  • 20
    • 42949178495 scopus 로고    scopus 로고
    • Epidemic dengue and dengue hemorrhagic fever at the Texas-Mexico border: Results of a household-based seroepidemiologic survey, December 2005
    • Ramos, M. M. et al. Epidemic dengue and dengue hemorrhagic fever at the Texas-Mexico border: results of a household-based seroepidemiologic survey, December 2005. Am. J. Trop. Med. Hyg. 78, 364-369 (2008).
    • (2008) Am. J. Trop. Med. Hyg. , vol.78 , pp. 364-369
    • Ramos, M.M.1
  • 21
    • 84889848578 scopus 로고    scopus 로고
    • Identification of dengue fever cases in Houston, Texas, with evidence of autochthonous transmission between 2003 and 2005
    • Murray, K. O. et al. Identification of dengue fever cases in Houston, Texas, with evidence of autochthonous transmission between 2003 and 2005. Vector Borne Zoonotic Dis. 13, 835-845 (2013).
    • (2013) Vector Borne Zoonotic Dis. , vol.13 , pp. 835-845
    • Murray, K.O.1
  • 22
    • 84964436564 scopus 로고    scopus 로고
    • On the seasonal occurrence and abundance of the Zika virus vector mosquito Aedes aegypti in the contiguous United States
    • Monaghan, A. J. et al. On the seasonal occurrence and abundance of the Zika virus vector mosquito Aedes aegypti in the contiguous United States. PLoS Curr. http://dx. doi. org/10. 1371/currents. outbreaks. 50dfc7f46798675fc63e7d7da 563da76 (2016).
    • (2016) PLoS Curr.
    • Monaghan, A.J.1
  • 23
    • 84961627429 scopus 로고    scopus 로고
    • Evidence of vertical transmission and co-circulation of chikungunya and dengue viruses in field populations of Aedes aegypti (L.) from Guerrero
    • Dzul-Manzanilla, F. et al. Evidence of vertical transmission and co-circulation of chikungunya and dengue viruses in field populations of Aedes aegypti (L.) from Guerrero, Mexico. Trans. R. Soc. Trop. Med. Hyg. 110, 141-144 (2016).
    • (2016) Mexico. Trans. R. Soc. Trop. Med. Hyg. , vol.110 , pp. 141-144
    • Dzul-Manzanilla, F.1
  • 24
    • 85019741923 scopus 로고    scopus 로고
    • Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples
    • Quick, J. et al. Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples. Nat. Protocols http://dx. doi. org/10. 1038/nprot. 2017. 066 (2017).
    • (2017) Nat. Protocols
    • Quick, J.1
  • 25
    • 84864530626 scopus 로고    scopus 로고
    • Bayesian phylogenetics with BEAUti and the BEAST 1. 7
    • Drummond, A. J., Suchard, M. A., Xie, D. & Rambaut, A. Bayesian phylogenetics with BEAUti and the BEAST 1. 7. Mol. Biol. Evol. 29, 1969-1973 (2012).
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 1969-1973
    • Drummond, A.J.1    Suchard, M.A.2    Xie, D.3    Rambaut, A.4
  • 26
    • 84984839752 scopus 로고    scopus 로고
    • Modeling mosquito-borne disease spread in U. S. Urbanized areas: The case of dengue in Miami
    • Robert, M. A. et al. Modeling mosquito-borne disease spread in U. S. urbanized areas: the case of dengue in Miami. PLoS One 11, e0161365 (2016).
    • (2016) PLoS One , vol.11 , pp. e0161365
    • Robert, M.A.1
  • 27
    • 84973408455 scopus 로고    scopus 로고
    • First US case of Zika virus infection is identified in Texas
    • McCarthy, M. First US case of Zika virus infection is identified in Texas. Br. Med. J. 352, i212 (2016).
    • (2016) Br. Med. J. , vol.352 , pp. i212
    • McCarthy, M.1
  • 28
    • 85020896858 scopus 로고    scopus 로고
    • Travel volume to the United States from countries and U. S. Territories with local Zika virus transmission
    • Nelson, B. et al. Travel volume to the United States from countries and U. S. territories with local Zika virus transmission. PLoS Curr. http://dx. doi. org/ 10. 1371/currents. outbreaks. ac6d0f8c9c35e88825c1a1147697531c (2016).
    • (2016) PLoS Curr.
    • Nelson, B.1
  • 31
    • 67149088928 scopus 로고    scopus 로고
    • Zika virus outbreak on Yap Island, Federated States of Micronesia
    • Duffy, M. R. et al. Zika virus outbreak on Yap Island, Federated States of Micronesia. N. Engl. J. Med. 360, 2536-2543 (2009).
    • (2009) N. Engl. J. Med. , vol.360 , pp. 2536-2543
    • Duffy, M.R.1
  • 32
    • 84994588712 scopus 로고    scopus 로고
    • Estimating the subcritical transmissibility of the Zika outbreak in the State of Florida, USA, 2016
    • Dinh, L., Chowell, G., Mizumoto, K. & Nishiura, H. Estimating the subcritical transmissibility of the Zika outbreak in the State of Florida, USA, 2016. Theor. Biol. Med. Model. 13, 20 (2016).
    • (2016) Theor. Biol. Med. Model. , vol.13 , pp. 20
    • Dinh, L.1    Chowell, G.2    Mizumoto, K.3    Nishiura, H.4
  • 33
    • 84901279781 scopus 로고    scopus 로고
    • Air travel is associated with intracontinental spread of dengue virus serotypes 1-3 in Brazil
    • Nunes, M. R. T. et al. Air travel is associated with intracontinental spread of dengue virus serotypes 1-3 in Brazil. PLoS Negl. Trop. Dis. 8, e2769 (2014).
    • (2014) PLoS Negl. Trop. Dis. , vol.8 , pp. e2769
    • Nunes, M.R.T.1
  • 34
    • 85085226338 scopus 로고    scopus 로고
    • Zika virus., Florida Department of Health
    • Zika virus. Florida Department of Health http://www. floridahealth. gov/ diseases-and-conditions/zika-virus/index. html?utm-source=flhealthIndex (2017).
    • (2017)
  • 35
    • 85085222247 scopus 로고    scopus 로고
    • Daily Zika update.
    • Daily Zika update. Florida Department of Health http://www. floridahealth. gov/ newsroom/all-articles. html (2017).
    • (2017) Florida Department of Health
  • 36
    • 0003564810 scopus 로고    scopus 로고
    • Zika virus case counts in the US.
    • Zika virus case counts in the US. The Centers for Disease Control and Prevention http://www. cdc. gov/zika/geo/united-states. html (2016).
    • (2016) The Centers for Disease Control and Prevention
  • 37
    • 84973561129 scopus 로고    scopus 로고
    • Interim guidance for interpretation of Zika virus antibody test results
    • Rabe, I. B. et al. Interim guidance for interpretation of Zika virus antibody test results. MMWR Morb. Mortal. Wkly. Rep. 65, 543-546 (2016).
    • (2016) MMWR Morb. Mortal. Wkly. Rep. , vol.65 , pp. 543-546
    • Rabe, I.B.1
  • 38
    • 84961166109 scopus 로고    scopus 로고
    • Zika virus: Diagnostics for an emerging pandemic threat
    • Waggoner, J. J. & Pinsky, B. A. Zika virus: diagnostics for an emerging pandemic threat. J. Clin. Microbiol. 54, 860-867 (2016).
    • (2016) J. Clin. Microbiol. , vol.54 , pp. 860-867
    • Waggoner, J.J.1    Pinsky, B.A.2
  • 39
    • 48749093929 scopus 로고    scopus 로고
    • Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007
    • Lanciotti, R. S. et al. Genetic and serologic properties of Zika virus associated with an epidemic, Yap State, Micronesia, 2007. Emerg. Infect. Dis. 14, 1232-1239 (2008).
    • (2008) Emerg. Infect. Dis. , vol.14 , pp. 1232-1239
    • Lanciotti, R.S.1
  • 40
    • 84969492157 scopus 로고    scopus 로고
    • Interim guidance for zika virus testing of urine-United States, 2016
    • Interim Guidance for Zika Virus Testing of Urine-United States, 2016. MMWR Morb. Mortal. Wkly. Rep. 65, 474 (2016).
    • (2016) MMWR Morb. Mortal. Wkly. Rep. , vol.65 , pp. 474
  • 42
    • 84994482412 scopus 로고    scopus 로고
    • Potential for Zika virus introduction and transmission in resource-limited countries in Africa and the Asia-Pacific region: A modelling study
    • Bogoch, I. I. et al. Potential for Zika virus introduction and transmission in resource-limited countries in Africa and the Asia-Pacific region: a modelling study. Lancet Infect. Dis. 16, 1237-1245 (2016).
    • (2016) Lancet Infect. Dis. , vol.16 , pp. 1237-1245
    • Bogoch, I.I.1
  • 43
    • 84864280981 scopus 로고    scopus 로고
    • Estimating abundance from presence/absence maps
    • Hwang, W.-H. & He, F. Estimating abundance from presence/absence maps. Methods Ecol. Evol. 2, 550-559 (2011).
    • (2011) Methods Ecol. Evol. , vol.2 , pp. 550-559
    • Hwang, W.-H.1    He, F.2
  • 44
    • 84990971060 scopus 로고    scopus 로고
    • Clinical comparison, standardization and optimization of Zika virus molecular detection
    • Corman, V. M. et al. Clinical comparison, standardization and optimization of Zika virus molecular detection. Bull. World Health Organ. http://dx. doi. org/10. 2471/BLT. 16. 175950 (2016).
    • (2016) Bull. World Health Organ.
    • Corman, V.M.1
  • 45
    • 84994579986 scopus 로고    scopus 로고
    • 1970s and 'Patient 0' HIV-1 genomes illuminate early HIV/ AIDS history in North America
    • Worobey, M. et al. 1970s and 'Patient 0' HIV-1 genomes illuminate early HIV/ AIDS history in North America. Nature 539, 98-101 (2016).
    • (2016) Nature , vol.539 , pp. 98-101
    • Worobey, M.1
  • 46
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: A flexible trimmer for Illumina sequence data
    • Bolger, A. M., Lohse, M. & Usadel, B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30, 2114-2120 (2014).
    • (2014) Bioinformatics , vol.30 , pp. 2114-2120
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 47
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078-2079 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 49
    • 84863507534 scopus 로고    scopus 로고
    • Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
    • Kearse, M. et al. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28, 1647-1649 (2012).
    • (2012) Bioinformatics , vol.28 , pp. 1647-1649
    • Kearse, M.1
  • 50
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from high-throughput sequencing reads
    • Martin, M. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet. journal 17, 10-12 (2011).
    • (2011) EMBnet. Journal , vol.17 , pp. 10-12
    • Martin, M.1
  • 51
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • Schmieder, R. & Edwards, R. Quality control and preprocessing of metagenomic datasets. Bioinformatics 27, 863-864 (2011).
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 52
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead, B. & Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357-359 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 53
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 30, 772-780 (2013).
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 54
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52, 696-704 (2003).
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 55
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang, Z. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39, 306-314 (1994).
    • (1994) J. Mol. Evol. , vol.39 , pp. 306-314
    • Yang, Z.1
  • 56
    • 84864453108 scopus 로고    scopus 로고
    • JModelTest 2: More models, new heuristics and parallel computing
    • Darriba, D., Taboada, G. L., Doallo, R. & Posada, D. jModelTest 2: more models, new heuristics and parallel computing. Nat. Methods 9, 772 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 772
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 57
    • 85084326730 scopus 로고    scopus 로고
    • Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)
    • Rambaut, A., Lam, T. T., Max Carvalho, L. & Pybus, O. G. Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen). Virus Evol. http://dx. doi. org/10. 1093/ve/vew007 (2016).
    • (2016) Virus Evol.
    • Rambaut, A.1    Lam, T.T.2    Max Carvalho, L.3    Pybus, O.G.4
  • 58
    • 28944450584 scopus 로고    scopus 로고
    • Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
    • Shapiro, B., Rambaut, A. & Drummond, A. J. Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol. Biol. Evol. 23, 7-9 (2006).
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 7-9
    • Shapiro, B.1    Rambaut, A.2    Drummond, A.J.3
  • 59
    • 53849090594 scopus 로고    scopus 로고
    • Bayesian analysis of elapsed times in continuous-time Markov chains
    • Ferreira, M. A. R. & Suchard, M. A. Bayesian analysis of elapsed times in continuous-time Markov chains. Can. J. Stat. 36, 355-368 (2008).
    • (2008) Can. J. Stat. , vol.36 , pp. 355-368
    • Ferreira, M.A.R.1    Suchard, M.A.2
  • 60
    • 84865475040 scopus 로고    scopus 로고
    • Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
    • Baele, G. et al. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. Mol. Biol. Evol. 29, 2157-2167 (2012).
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 2157-2167
    • Baele, G.1
  • 61
    • 79951566251 scopus 로고    scopus 로고
    • Improving marginal likelihood estimation for Bayesian phylogenetic model selection
    • Xie, W., Lewis, P. O., Fan, Y., Kuo, L. & Chen, M.-H. Improving marginal likelihood estimation for Bayesian phylogenetic model selection. Syst. Biol. 60, 150-160 (2011).
    • (2011) Syst. Biol. , vol.60 , pp. 150-160
    • Xie, W.1    Lewis, P.O.2    Fan, Y.3    Kuo, L.4    Chen, M.-H.5
  • 62
    • 0000736067 scopus 로고    scopus 로고
    • Simulating normalizing constants: From importance sampling to bridge sampling to path sampling
    • Gelman, A. & Meng, X.-L. Simulating normalizing constants: from importance sampling to bridge sampling to path sampling. Stat. Sci. 13, 163-185 (1998).
    • (1998) Stat. Sci. , vol.13 , pp. 163-185
    • Gelman, A.1    Meng, X.-L.2
  • 63
    • 17744381574 scopus 로고    scopus 로고
    • Bayesian coalescent inference of past population dynamics from molecular sequences
    • Drummond, A. J., Rambaut, A., Shapiro, B. & Pybus, O. G. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol. Biol. Evol. 22, 1185-1192 (2005).
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 1185-1192
    • Drummond, A.J.1    Rambaut, A.2    Shapiro, B.3    Pybus, O.G.4
  • 64
    • 84902593590 scopus 로고    scopus 로고
    • Public health. Measuring the path toward malaria elimination
    • Churcher, T. S. et al. Public health. Measuring the path toward malaria elimination. Science 344, 1230-1232 (2014).
    • (2014) Science , vol.344 , pp. 1230-1232
    • Churcher, T.S.1
  • 65
    • 27844455994 scopus 로고    scopus 로고
    • Superspreading and the effect of individual variation on disease emergence
    • Lloyd-Smith, J. O., Schreiber, S. J., Kopp, P. E. & Getz, W. M. Superspreading and the effect of individual variation on disease emergence. Nature 438, 355-359 (2005).
    • (2005) Nature , vol.438 , pp. 355-359
    • Lloyd-Smith, J.O.1    Schreiber, S.J.2    Kopp, P.E.3    Getz, W.M.4
  • 66
    • 81055137611 scopus 로고    scopus 로고
    • Estimating the transmission potential of supercritical processes based on the final size distribution of minor outbreaks
    • Nishiura, H., Yan, P., Sleeman, C. K. & Mode, C. J. Estimating the transmission potential of supercritical processes based on the final size distribution of minor outbreaks. J. Theor. Biol. 294, 48-55 (2012).
    • (2012) J. Theor. Biol. , vol.294 , pp. 48-55
    • Nishiura, H.1    Yan, P.2    Sleeman, C.K.3    Mode, C.J.4
  • 67
    • 84892753788 scopus 로고    scopus 로고
    • Heterogeneity, mixing, and the spatial scales of mosquito-borne pathogen transmission
    • Perkins, T. A., Scott, T. W., Le Menach, A. & Smith, D. L. Heterogeneity, mixing, and the spatial scales of mosquito-borne pathogen transmission. PLOS Comput. Biol. 9, e1003327 (2013).
    • (2013) PLOS Comput. Biol. , vol.9 , pp. e1003327
    • Perkins, T.A.1    Scott, T.W.2    Le Menach, A.3    Smith, D.L.4
  • 68
    • 84945895822 scopus 로고    scopus 로고
    • Big city, small world: Density, contact rates, and transmission of dengue across Pakistan
    • Kraemer, M. U. G. et al. Big city, small world: density, contact rates, and transmission of dengue across Pakistan. J. R. Soc. Interface 12, 20150468 (2015).
    • (2015) J. R. Soc. Interface , vol.12 , pp. 20150468
    • Kraemer, M.U.G.1
  • 69
    • 85010723210 scopus 로고    scopus 로고
    • Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: A modelling study
    • Kraemer, M. U. G. et al. Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study. Lancet Infect. Dis. 17, 330-338 (2017).
    • (2017) Lancet Infect. Dis. , vol.17 , pp. 330-338
    • Kraemer, M.U.G.1
  • 70
    • 84943195146 scopus 로고    scopus 로고
    • Increasing dengue incidence in Singapore over the past 40 years: Population growth, climate and mobility
    • Struchiner, C. J., Rocklöv, J., Wilder-Smith, A. & Massad, E. Increasing dengue incidence in Singapore over the past 40 years: population growth, climate and mobility. PLoS One 10, e0136286 (2015).
    • (2015) PLoS One , vol.10 , pp. e0136286
    • Struchiner, C.J.1    Rocklöv, J.2    Wilder-Smith, A.3    Massad, E.4
  • 71
    • 84962339833 scopus 로고    scopus 로고
    • Temporal and spatial variability of entomological risk indices for West Nile virus infection in Northern Colorado: 2006-2013
    • Fauver, J. R. et al. Temporal and spatial variability of entomological risk indices for West Nile virus infection in Northern Colorado: 2006-2013. J. Med. Entomol. 53, 425-434 (2016).
    • (2016) J. Med. Entomol. , vol.53 , pp. 425-434
    • Fauver, J.R.1
  • 72
    • 84991670407 scopus 로고    scopus 로고
    • Assessing seasonal risks for the introduction and mosquito-borne spread of Zika virus in Europe
    • Rocklöv, J. et al. Assessing seasonal risks for the introduction and mosquito-borne spread of Zika virus in Europe. EBioMedicine 9, 250-256 (2016).
    • (2016) EBioMedicine , vol.9 , pp. 250-256
    • Rocklöv, J.1
  • 73
    • 85085221716 scopus 로고    scopus 로고
    • National Direction of Epidemiological Surveillance for Vector Transmitted Diseases (Spanish) Ministry of Public Health, Ecuador.
    • National Direction of Epidemiological Surveillance for Vector Transmitted Diseases (Spanish) Ministry of Public Health, Ecuador. http://www. salud. gob. ec/ wp-content/uploads/2015/12/GACETA-ZIKA-SE5corregido. pdf (2017).
    • (2017)
  • 74
    • 85058156773 scopus 로고    scopus 로고
    • Pan American Health Organization
    • Zika Cumulative Cases. Pan American Health Organization http://www. paho. org/hq/index. php?option=com-content&view=article&id=12390&Itemid= 42090&lang=en (2016).
    • (2016) Zika Cumulative Cases.
  • 75
    • 84994643743 scopus 로고    scopus 로고
    • Times to key events in the course of Zika infection and their implications: A systematic review and pooled analysis
    • Lessler, J. T. et al. Times to key events in the course of Zika infection and their implications: a systematic review and pooled analysis. Bull. World Health Organ. 94, 841-849 (2016).
    • (2016) Bull. World Health Organ. , vol.94 , pp. 841-849
    • Lessler, J.T.1
  • 76
    • 84867140873 scopus 로고    scopus 로고
    • Cruise ship itineraries and occupancy rates
    • Lee, S. & Ramdeen, C. Cruise ship itineraries and occupancy rates. Tourism Manage. 34, 236-237 (2013).
    • (2013) Tourism Manage. , vol.34 , pp. 236-237
    • Lee, S.1    Ramdeen, C.2
  • 77
    • 85085228132 scopus 로고    scopus 로고
    • FCCA Research & Statistics. Florida-Caribbean Cruise Association
    • FCCA Research & Statistics. Florida-Caribbean Cruise Association http://www. f-cca. com/research. html (2017).
    • (2017)
  • 79
    • 34247493236 scopus 로고    scopus 로고
    • Matplotlib: A 2D graphics environment
    • Hunter, J. D. Matplotlib: A 2D graphics environment. Comput. Sci. Eng. 9, 90-95 (2007).
    • (2007) Comput. Sci. Eng. , vol.9 , pp. 90-95
    • Hunter, J.D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.