MONALISA for stochastic simulations of Petri net models of biochemical systems

BMC Bioinformatics

Volumn 16, Issue 1, 2015, Pages

  Balazki, Pavel ^a,b   Lindauer, Klaus ^b   Einloft, Jens ^a   Ackermann, Jörg ^a   Koch, Ina ^a  

^a GOETHE UNIVERSITY   (Germany)

^b SANOFI AVENTIS DEUTSCHLAND GMBH   (Germany)

Author keywords

Gillespie's algorithm; Insulin receptor recycling; MonaLisa; Petri net; Stochastic simulation algorithm

Indexed keywords

ALGORITHMS; BIOCHEMISTRY; BIOLOGY; COMPLEX NETWORKS; COMPUTER SOFTWARE; DIFFERENTIAL EQUATIONS; GENE EXPRESSION; INFORMATION DISSEMINATION; INSULIN; MOLECULES; OPEN SOURCE SOFTWARE; OPEN SYSTEMS; ORDINARY DIFFERENTIAL EQUATIONS; PETRI NETS; RATE CONSTANTS; RECYCLING; SIGNAL TRANSDUCTION; SOFTWARE ENGINEERING; STOCHASTIC SYSTEMS; TOPOLOGY; VISUALIZATION;

GILLESPIE; INSULIN RECEPTORS; MONALISA; OPEN SOURCE DISTRIBUTION; SIGNAL TRANSDUCTION PATHWAYS; STOCHASTIC SIMULATION ALGORITHMS; STOCHASTIC SIMULATION METHODS; VISUALIZATION AND ANALYSIS;

STOCHASTIC MODELS;

INSULIN RECEPTOR;

ALGORITHM; COMPUTER SIMULATION; GENE REGULATORY NETWORK; GENETICS; HUMAN; KINETICS; MARKOV CHAIN; SIGNAL TRANSDUCTION; SOFTWARE; SYSTEMS BIOLOGY; THEORETICAL MODEL;

ALGORITHMS; COMPUTER SIMULATION; GENE REGULATORY NETWORKS; HUMANS; KINETICS; MODELS, THEORETICAL; RECEPTOR, INSULIN; SIGNAL TRANSDUCTION; SOFTWARE; STOCHASTIC PROCESSES; SYSTEMS BIOLOGY;

EID: 85019260780     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/s12859-015-0596-y     Document Type: Article

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