Dissection of a major QTL qhir1 conferring maternal haploid induction ability in maize

Theoretical and Applied Genetics

Volumn 130, Issue 6, 2017, Pages 1113-1122

  Nair, Sudha K ^a   Molenaar, Willem ^b   Melchinger, Albrecht E ^b   Boddupalli, Prasanna M ^c   Martinez, Leocadio ^d   Lopez, Luis Antonio ^d   Chaikam, Vijay ^c  

^a International Maize and Wheat Improvement Center (CIMMYT)   (India)

^b UNIVERSITY OF HOHENHEIM   (Germany)

^c INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Kenya)

^d INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

Author keywords

[No Author keywords available]

Indexed keywords

AGRONOMY; CHROMOSOMES;

ACID-BINDING PROTEINS; CANDIDATE GENES; GENETIC STUDIES; GENOME-WIDE ASSOCIATION STUDIES; HIGH FREQUENCY HF; INDUCTION ABILITY; MARKER-ASSISTED SELECTION; SEGREGATION DISTORTION;

GENETIC ENGINEERING;

PLANT DNA;

GENE FREQUENCY; GENETIC ASSOCIATION STUDY; GENETIC RECOMBINATION; GENETICS; GENOTYPE; HAPLOIDY; HAPLOTYPE; MAIZE; PHENOTYPE; PLANT SEED; QUANTITATIVE TRAIT LOCUS;

DNA, PLANT; GENE FREQUENCY; GENETIC ASSOCIATION STUDIES; GENOTYPE; HAPLOIDY; HAPLOTYPES; PHENOTYPE; QUANTITATIVE TRAIT LOCI; RECOMBINATION, GENETIC; SEEDS; ZEA MAYS;

EID: 85015638447     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-017-2873-9     Document Type: Article

References (43)

1. Barret P, Brinkmann M, Beckert M (2008) A major locus expressed in the male gametophyte with incomplete penetrance is responsible for in situ gynogenesis in maize. Theor Appl Genet 117:581–594
2. Bylich VG, Chalyk ST (1996) Existence of pollen grains with a pair of morphologically different sperm nuclei as a possible cause of the haploid-inducing capacity in ZMS line. Maize Genet Coop Newsl 70:33
3. CIMMYT (2001) Laboratory protocols: CIMMYT applied molecular genetics laboratory protocols. CIMMYT, Mexico D.F
4. Cantarel BL, Korf I, Robb SMC et al (2008) MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes. Genome Res 18:188–196
5. Chaikam V, Martinez L, Melchinger AE et al (2016) Development and validation of red root marker-based haploid inducers in maize. Crop Sci 56:1–11
6. Chaikam V (2012) In vivo maternal haploid induction in maize. In: Prasanna B, Chaikam V, Mahuku G (eds) Doubled haploid technology in maize breeding: theory and practice. CIMMYT, Mexico, DF, pp 14–19
7. Chalyk S, Baumann A, Daniel G, Eder J (2003) Aneuploidy as a possible cause of haploid-induction in maize. Maize Genet Coop Newsl 77:29
8. Chase SS (1969) Monoploids and monoploid-derivatives of maize (Zea mays L.). Bot Rev 35:117–168
9. Coe EH (1959) A line of maize with high haploid frequency. Am Nat 93:381–382
10. Deimling S, Röber F, Geiger HH (1997) Methodik und Genetik der in-vivo-Haploideninduktion bei Mais. Vor Pflanzenzüchtg 38:203–224
11. Dong X, Xu X, Miao J et al (2013) Fine mapping of qhir1 influencing in vivo haploid induction in maize. Theor Appl Genet 126:1713–1720
12. Ganal MW, Durstewitz G, Polley A et al (2011) A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome. PLoS One 6:e28334
13. Gao S, Martinez C, Skinner DJ et al (2008) Development of a seed DNA-based genotyping system for marker-assisted selection in maize. Mol Breed 22:477–494
14. Geiger HH (2009) Doubled haploids. In: Bennetzen JL, Hake S (eds) Handbook of Maize. Springer, Berlin, pp 641–657
15. Gilles LM, Khaled A, Laffaire J et al (2017) Loss of pollen-specific phospholipase NOT LIKE DAD triggers gynogenesis in maize. EMBO J. doi:10.15252/embj.201796603
16. Hu H, Schrag TA, Peis R et al (2016) The genetic basis of haploid induction in maize identified with a novel Genome-Wide Association Method. Genetics 202:1267–1276
17. Kelliher T, Starr D, Wang W et al (2016) Maternal haploids are preferentially induced by CENH3-tailswap transgenic complementation in maize. Front Plant Sci 7:414
18. Kelliher T, Starr D, Richbourg L, Chintamanani S, Delzer B, Nuccio ML, Green J, Chen Z, McCuiston J, Wang W, Liebler T, Bullock P, Martin B (2017) MATRILINEAL, a sperm-specific phospholipase, triggers maize haploid induction. Nature 542(7639):105–109
19. Kraptchev B, Kruleva M, Dankov T (2003) Induced heterofertilization in maize (Zea mays L.). Maydica 48:271–274
20. Lashermes P, Beckert M (1988) Genetic control of maternal haploidy in maize (Zea mays L.) and selection of haploid inducing lines. Theor Appl Genet 76:405–410
21. Li L, Xu X, Jin W, Chen S (2009) Morphological and molecular evidences for DNA introgression in haploid induction via a high oil inducer CAUHOI in maize. Planta 230:367–376
22. Liu C, Li W, Zhong Y et al (2015) Fine mapping of qhir8 affecting in vivo haploid induction in maize. Theor Appl Genet 128:2507–2515
23. Liu C, Li X, Meng D, Zhong Y, Chen C, Dong X, Xu X, Chen B, Li W, Li L, Tian X, Zhao H, Song W, Luo H, Zhang Q, Lai J, Jin W, Yan J, Chen S (2017) A 4-bp Insertion at ZmPLA1 Encoding a Putative Phospholipase A Generates Haploid Induction in Maize. Mol Plant 10(3):520–522
24. Melchinger AE, Brauner PC, Böhm J, Schipprack W (2016) In vivo haploid induction in maize: comparison of different testing regimes for measuring haploid induction rates. Crop Sci 56:1127–1135
25. Melchinger AE, Schipprack W, Würschum T, et al (2013) Rapid and accurate identification of in vivo-induced haploid seeds based on oil content in maize. Sci Rep 3:2129
26. Prigge V, Schipprack W, Mahuku G et al (2012a) Development of in vivo haploid inducers for tropical maize breeding programs. Euphytica 185:481–490
27. Prigge V, Sánchez C, Dhillon BS et al (2011) Doubled haploids in tropical maize: I. Effects of inducers and source germplasm on in vivo haploid induction rates. Crop Sci 51:1498–1506
28. Prigge V, Xu X, Li L et al (2012b) New insights into the genetics of in vivo induction of maternal haploids, the backbone of doubled haploid technology in maize. Genetics 190:781–793
29. Prigge V, Melchinger AE (2012) Production of haploids and doubled haploids in maize. In: Loyola-Vargas VM, Ochoa-Alejo N (eds) Plant cell culture protocols. Springer, New Jersey, pp 161–172
30. Qiu F, Liang Y, Li Y et al (2014) Morphological, cellular and molecular evidences of chromosome random elimination in vivo upon haploid induction in maize. Curr Plant Biol 1:83–90
31. Ravi M, Chan SWL (2010) Haploid plants produced by centromere-mediated genome elimination. Nature 464:615–618
32. Ravi M, Marimuthu MPA, Tan EH, et al (2014) A haploid genetics toolbox for Arabidopsis thaliana. Nat Commun 5:5334
33. Röber FK, Gordillo GA, Geiger HH (2005) In vivo haploid induction in maize-performance of new inducers and significance of doubled haploid lines in hybrid breeding. Maydica 50:275
34. Rotarenco V, Eder J (2003) Possible effects of heterofertilization on the induction of maternal haploids in maize. Maize Genet Coop Newsl 77:30
35. Sarkar KR, Coe EH Jr (1966) A genetic analysis of the origin of maternal haploids in maize. Genetics 54:453
36. Satarova TN, Cherchel VY (2010) Inheritance of matroclinal haploidy in maize. Tsitol Genet 44(3):35–40
37. Seymour DK, Filiault DL, Henry IM, et al (2012) Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping. Proc Natl Acad Sci 109:4227–4232
38. Shen W-H, Parmentier Y, Hellmann H et al (2002) Null mutation of AtCUL1 causes arrest in early embryogenesis in Arabidopsis. Mol Biol Cell 13:1916–1928
39. Swapna M, Sarkar KR (2012) Anomalous fertilization in haploidy inducer lines in maize (Zea mays L.). Maydica 56:221–225
40. Thomann A, Brukhin V, Dieterle M et al (2005) Arabidopsis CUL3A and CUL3B genes are essential for normal embryogenesis. Plant J 43:437–448
41. Xu X, Li L, Dong X et al (2013) Gametophytic and zygotic selection leads to segregation distortion through in vivo induction of a maternal haploid in maize. J Exp Bot 64:1083–1096
42. Yin Y, Lin C, Kim ST et al (2011) The E3 ubiquitin ligase Cullin 4 A regulates meiotic progression in mouse spermatogenesis. Dev Biol 356:51–62
43. Zhang Z, Qiu F, Liu Y et al (2008) Chromosome elimination and in vivo haploid production induced by Stock 6-derived inducer line in maize (Zea mays L.). Plant Cell Rep 27:1851–1860