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Volumn 33, Issue 1, 2017, Pages 49-55

Nanocall: An open source basecaller for Oxford Nanopore sequencing data

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 85013290599     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btw569     Document Type: Article
Times cited : (97)

References (10)
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    • Ip,C.L. et al. (2015) Minion analysis and reference consortium: phase 1 data release and analysis. F1000Research, 4, 10.12688/f1000research.7201.1.
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  • 5
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    • A complete bacterial genome assembled de novo using only nanopore sequencing data
    • Loman,N.J. et al. (2015) A complete bacterial genome assembled de novo using only nanopore sequencing data. Nat. Methods, 12, 733-735.
    • (2015) Nat. Methods , vol.12 , pp. 733-735
    • Loman, N.J.1
  • 6
    • 84942520038 scopus 로고    scopus 로고
    • A reference bacterial genome dataset generated on the minion portable single-molecule nanopore sequencer
    • Quick,J. et al. (2014) A reference bacterial genome dataset generated on the minion portable single-molecule nanopore sequencer. Gigascience, 3, 10-1186.
    • (2014) Gigascience , vol.3 , pp. 10-1186
    • Quick, J.1
  • 7
    • 84958068536 scopus 로고    scopus 로고
    • Real-time, portable genome sequencing for ebola surveillance
    • Quick,J. et al. (2016) Real-time, portable genome sequencing for ebola surveillance. Nature, 530, 228-232.
    • (2016) Nature , vol.530 , pp. 228-232
    • Quick, J.1
  • 8
    • 84931044183 scopus 로고    scopus 로고
    • Analysis of nanopore data using hidden Markov models
    • Schreiber,J. and Karplus,K. (2015) Analysis of nanopore data using hidden Markov models. Bioinformatics, 31, 1897-1903.
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    • Schreiber, J.1    Karplus, K.2
  • 9
    • 84943637090 scopus 로고    scopus 로고
    • De novo sequencing and variant calling with nanopores using PoreSeq
    • Szalay,T. and Golovchenko,J.A. (2015) De novo sequencing and variant calling with nanopores using PoreSeq. Nat. Biotechnol., 33, 1087-1091.
    • (2015) Nat. Biotechnol. , vol.33 , pp. 1087-1091
    • Szalay, T.1    Golovchenko, J.A.2
  • 10
    • 84861149539 scopus 로고    scopus 로고
    • DNA base-calling from a nanopore using a Viterbi algorithm
    • Timp,W. et al. (2012) DNA base-calling from a nanopore using a Viterbi algorithm. Biophys. J., 102, L37-L39.
    • (2012) Biophys. J. , vol.102 , pp. L37-L39
    • Timp, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.