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Volumn 5, Issue , 2016, Pages

PyGeno: A Python package for precision medicine and proteogenomics

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; DNA PACKAGING; DNA SEQUENCE; GENETIC DATABASE; GENOME ANALYSIS; NEXT GENERATION SEQUENCING; PERSONALIZED MEDICINE; PROTEOGENOMICS; PYTHON PACKAGE; RNA SEQUENCE; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 85010917490     PISSN: 20461402     EISSN: 1759796X     Source Type: Journal    
DOI: 10.12688/F1000RESEARCH.8251.2     Document Type: Article
Times cited : (13)

References (13)
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  • 2
    • 84874724662 scopus 로고    scopus 로고
    • Update on activities at the Universal Protein Resource (UniProt) in 2013
    • Uniprot Consortium: Update on activities at the Universal Protein Resource (UniProt) in 2013. Nucleic Acids Res. 2013; 41(Database issue): D43-47.
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  • 3
    • 84898493547 scopus 로고    scopus 로고
    • Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides
    • Granados DP, Sriranganadane D, Daouda T, et al.: Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides. Nat Commun. 2014; 5: 3600.
    • (2014) Nat Commun , vol.5 , pp. 3600
    • Granados, D.P.1    Sriranganadane, D.2    Daouda, T.3
  • 4
    • 84901599553 scopus 로고    scopus 로고
    • A draft map of the human proteome
    • Kim MS, Pinto SM, Getnet D, et al.: A draft map of the human proteome. Nature. 2014; 509(7502): 575-581.
    • (2014) Nature , vol.509 , Issue.7502 , pp. 575-581
    • Kim, M.S.1    Pinto, S.M.2    Getnet, D.3
  • 5
    • 84901611036 scopus 로고    scopus 로고
    • Mass-spectrometry-based draft of the human proteome
    • Wilhelm M, Schlegl J, Hahne H, et al.: Mass-spectrometry-based draft of the human proteome. Nature. 2014; 509(7502): 582-587.
    • (2014) Nature , vol.509 , Issue.7502 , pp. 582-587
    • Wilhelm, M.1    Schlegl, J.2    Hahne, H.3
  • 6
    • 84953260622 scopus 로고    scopus 로고
    • Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames
    • Laumont CM, Daouda T, Laverdure JP, et al.: Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames. Nat Commun. 2016; 7: 10238.
    • (2016) Nat Commun , vol.7 , pp. 10238
    • Laumont, C.M.1    Daouda, T.2    Laverdure, J.P.3
  • 7
    • 0035173378 scopus 로고    scopus 로고
    • dbSNP: the NCBI database of genetic variation
    • Sherry ST, Ward MH, Kholodov M, et al.: dbSNP: the NCBI database of genetic variation. Nucleic Acids Res. 2001; 29(1): 308-311.
    • (2001) Nucleic Acids Res , vol.29 , Issue.1 , pp. 308-311
    • Sherry, S.T.1    Ward, M.H.2    Kholodov, M.3
  • 8
    • 65649092976 scopus 로고    scopus 로고
    • Biopython: freely available Python tools for computational molecular biology and bioinformatics
    • Cock PJ, Antao T, Chang JT, et al.: Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics. 2009; 25(11): 1422-1423.
    • (2009) Bioinformatics , vol.25 , Issue.11 , pp. 1422-1423
    • Cock, P.J.1    Antao, T.2    Chang, J.T.3
  • 9
    • 34748893838 scopus 로고    scopus 로고
    • PyCogent: a toolkit for making sense from sequence
    • Knight R, Maxwell P, Birmingham A, et al.: PyCogent: a toolkit for making sense from sequence. Genome Biol. 2007; 8(8): R171.
    • (2007) Genome Biol , vol.8 , Issue.8 , pp. R171
    • Knight, R.1    Maxwell, P.2    Birmingham, A.3
  • 13
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    • Matplotlib: A 2d graphics environment
    • Hunter JD: Matplotlib: A 2d graphics environment. Comput Sci Eng. 2007; 9(3): 90-95.
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    • Hunter, J.D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.