Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Genome Announcements

Volumn 4, Issue 6, 2016, Pages

  Huang, Weihua ^a   Yin, Changhong ^a   Zhuge, Jian ^b   Farooq, Taliya ^a,b   Yoon, Esther C ^a,b   Nolan, Sheila M ^a   Chen, Donald ^a   Fallon, John T ^a,b   Wang, Guiqing ^a,b  

^a NEW YORK MEDICAL COLLEGE   (United States)

^b WESTCHESTER MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85010756169     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.01394-16     Document Type: Article

References (8)

1. Schieble JH, Fox VL, Lennette EH. 1967. A probable new human picornavirus associated with respiratory diseases. Am J Epidemiol 85:297-310.
2. Holm-Hansen CC, Midgley SE, Fischer TK. 2016. Global emergence of enterovirus D68: a systematic review. Lancet Infect Dis 16:e64-e75 http://dx.doi.org/10.1016/s1473-3099(15)00543-5.
3. Midgley CM, Watson JT, Nix WA, Curns AT, Rogers SL, Brown BA, Conover C, Dominguez SR, Feikin DR, Gray S, Hassan F, Hoferka S, Jackson MA, Johnson D, Leshem E, Miller L, Nichols JB, Nyquist AC, Obringer E, Patel A, Patel M, Rha B, Schneider E, Schuster JE, Selvarangan R, Seward JF, Turabelidze G, Oberste MS, Pallansch MA, Gerber SI. 2015 Severe respiratory illness associated with a nationwide outbreak of enterovirus D68 in the USA (2014): a descriptive epidemiological investigation. Lancet Respir Med 3:879-887. http://dx.doi.org/10.1016/S2213-2600(15)00335-5.
4. CDC. 2016. Non-polio enterovirus: enterovirus D68. Accessed 5 October 2016 http://www.cdc.gov/non-polio-enterovirus/about/ev-d68.html.
5. Zhuge J, Vail E, Bush JL, Singelakis L, Huang W, Nolan SM, Haas JP, Engel H, Della Posta M, Yoon EC, Fallon JT, Wang G. 2015. Evaluation of a real-time reverse transcription-PCR assay for detection of enterovirus D68 in clinical samples from an outbreak in New York State in 2014. J Clin Microbiol 53:1915-1920. http://dx.doi.org/10.1128/JCM.00358-15.
6. Huang W, Wang G, Lin H, Zhuge J, Nolan SM, Vail E, Dimitrova N, Fallon JT. 2016. Assessing next-generation sequencing and 4 bioinformatics tools for detection of enterovirus D68 and other respiratory viruses in clinical samples. Diagn Microbiol Infect Dis 85:26-29. http://dx.doi.org/10.1016/j.diagmicrobio.2016.01.013.
7. Huang W, Wang G, Zhuge J, Nolan SM, Dimitrova N, Fallon JT. 2015. Whole-genome sequence analysis reveals the enterovirus D68 isolates during the United States 2014 outbreak mainly belong to a novel clade. Sci Rep 5:15223. http://dx.doi.org/10.1038/srep15223.
8. Gong YN, Yang SL, Shih SR, Huang YC, Chang PY, Huang CG, Kao KC, Hu HC, Liu YC, Tsao KC. 2016. Molecular evolution and the global reemergence of enterovirus D68 by genome-wide analysis. Medicine (Baltimore) 95:e4416. http://dx.doi.org/10.1097/MD.0000000000004416.