Whole-genome sequencing for surveillance of invasive pneumococcal diseases in Ontario, Canada: Rapid prediction of genotype, antibiotic resistance and characterization of emerging serotype 22F

Frontiers in Microbiology

Volumn 7, Issue DEC, 2016, Pages

  Deng, Xianding ^a,b,c   Memari, Nader ^a   Teatero, Sarah ^a   Athey, Taryn ^a   Isabel, Marc ^d   Mazzulli, Tony ^a,b,c   Fittipaldi, Nahuel ^a,b   Gubbay, Jonathan B ^a,b,c,e  

^a PUBLIC HEALTH ONTARIO   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

^c UNIVERSITY HEALTH NETWORK   (Canada)

^d UNIVERSITÉ LAVAL   (Canada)

^e HOSPITAL FOR SICK CHILDREN   (Canada)

Author keywords

Antibiotic resistance prediction; Emerging 22F; Genomic diversification; Invasive pneumococcal disease; Whole genome sequencing

Indexed keywords

MACROLIDE; PNEUMOCOCCUS VACCINE;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL VIRULENCE; CLINICAL ARTICLE; COMPUTER MODEL; DISEASE SURVEILLANCE; GENE CLUSTER; HUMAN; MOLECULAR TYPING; MULTILOCUS SEQUENCE TYPING; NONHUMAN; ONTARIO; PNEUMOCOCCAL INFECTION; PROPHAGE; SENSITIVITY AND SPECIFICITY; SEROTYPE; SINGLE NUCLEOTIDE POLYMORPHISM; STREPTOCOCCUS PNEUMONIAE; WHOLE GENOME SEQUENCING;

EID: 85009354597     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2016.02099     Document Type: Article

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