Draft genome sequence of rice endophyte-associated isolate Kosakonia oryzae KO348

Genome Announcements

Volumn 3, Issue 3, 2015, Pages

  Meng, Xianfa ^a,b   Bertani, Iris ^a   Abbruscato, Pamela ^c   Piffanelli, Pietro ^c   Licastro, Danilo ^d   Wang, Changhai ^b   Venturi, Vittorio ^a  

^a INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Italy)

^b NANJING AGRICULTURAL UNIVERSITY   (China)

^c PARCO TECNOLOGICO PADANO   (Italy)

^d Cluster in Biomedicine (CBM) scrl Genomics   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85008449913     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00594-15     Document Type: Article

References (6)

1. Hormaeche E, Edwards PR. 1960. A proposed genus Enterobacter. Int J Syst Evol Microbiol 10:71-74. http://dx.doi.org/10.1099/0096266X-10-2-71.
2. Brady C, Cleenwerck I, Venter S, Coutinho T, De Vos P. 2013. Taxonomic evaluation of the genus Enterobacter based on multilocus sequence analysis (MLSA): proposal to reclassify E. nimipressuralis and E. Amnigenus into Lelliottia gen. nov. as Lelliottia nimipressuralis comb. nov. and Lelliottia amnigena comb.nov., respectively, E. GergoviaeandE. Pyrinus into Pluralibacter gen. nov. as Pluralibacter gergoviae comb. nov. and Pluralibacter pyrinus comb. nov., respectively, E. cowanii, E. radicincitans, E. Oryzae and E. arachidis into Kosakonia gen. nov. as Kosakonia cowanii comb. nov., Kosakonia radicincitans comb. nov., Kosakonia oryzae comb. nov. and Kosakonia arachidis comb. nov., respectively, and E. turicensis, E. helveticus and E. pulveris into Cronobacter as Cronobacter zurichensis nom. nov., Cronobacter helveticus comb. nov. and Cronobacter pulveris comb. nov., respectively, and emended description of the genera Enterobacter and Cronobacter. Syst Appl Microbiol 36:309-319. http://dx.doi.org/10.1016/j.syapm.2013.03.005.
3. Chen M, Zhu B, Lin L, Yang L, Li Y, An Q. 2014. Complete genome sequence of Kosakonia sacchari type strain SP1T. Stand Genomic Sci 9:1311-1318. http://dx.doi.org/10.4056/sigs.5779977.
4. Peng G, Zhang W, Luo H, Xie H, Lai W, Tan Z. 2009. Enterobacter oryzae sp. nov., a nitrogen-fixing bacterium isolated from the wild rice species Oryza latifolia. Int J Syst Evol Microbiol 59:1650-1655.
5. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, Pyshkin AV, Sirotkin AV, Vyahhi N, Tesler G, Alekseyev MA, Pevzner PA. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol 19:455-477. http://dx.doi.org/10.1089/cmb.2012.0021.
6. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD. 2008. The RAST server: Rapid Annotations using Subsystems Technology. BMC Genomics 9:75. http://dx.doi.org/10.1186/1471-2164-9-75.