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Discovery of sequence motifs related to coexpression of genes using evolutionary computation
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G.B. Fogel, D.G. Weekes, G. Varga, E.R. Dow, H.B. Harlow, J.E. Onyia, and S. Chen, “Discovery of sequence motifs related to coexpression of genes using evolutionary computation,” Nucleic Acids Research, vol. 32, no. 13, pp. 3826–3835, 2004.
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RNAMotif, an RNA secondary structure definition and search algorithm
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T.J. Macke, D.J. Ecker, R.R. Gutell, D. Gautheret, D.A. Case, and R. Sampath, “RNAMotif, an RNA secondary structure definition and search algorithm,” Nuc. Acids Res., vol. 29, pp. 4724–4735, 2001.
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Sampath, R.6
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3
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Discovery of RNA structural elements using evolutionary computation
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G.B. Fogel, V.W. Porto, D.G. Weekes, D.B. Fogel, R.H. Griffey, J.A. McNeil, E. Lesnik, D.J. Ecker, and R. Sampath, “Discovery of RNA structural elements using evolutionary computation,” Nuc. Acids Res., vol. 30, no. 23, pp. 5310–5317, 2002.
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Identification of Conserved Regulatory RNA Structures in Prokaryotic Metabolic Pathway Genes
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E.A. Lesnik, G.B. Fogel, D. Weekes, T.J. Henderson, H.B. Levene, R. Sampath, and D. Ecker, “Identification of Conserved Regulatory RNA Structures in Prokaryotic Metabolic Pathway Genes,” BioSystems, vol. 80, no. 2, pp. 145–154, 2004.
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Parameter optimization of an algorithm for RNA structure discovery
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G.B. Fogel, D.G. Weekes, R. Sampath, and D.J. Ecker, “Parameter optimization of an algorithm for RNA structure discovery,” Proceedings of the 2004 Congress on Evolutionary Computation, IEEE Press, Piscataway, NJ, pp. 607-613,2004.
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Proceedings of the 2004 Congress on Evolutionary Computation, IEEE Press, Piscataway, NJ
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Fogel, G.B.1
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Ecker, D.J.4
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