Assembly of long error-prone reads using de Bruijn graphs

Proceedings of the National Academy of Sciences of the United States of America

Volumn 113, Issue 52, 2016, Pages E8396-E8405

  Lin, Yu ^a   Yuan, Jeffrey ^a   Kolmogorov, Mikhail ^a   Shen, Max W ^a   Chaisson, Mark ^b   Pevzner, Pavel A ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

Author keywords

De Bruijn graph; Genome assembly; Single molecule sequencing

Indexed keywords

ANALYTICAL ERROR; ARTICLE; BACTERIAL GENOME; BENCHMARKING; CONSENSUS SEQUENCE; DE BRUIJN GRAPH; GENE SEQUENCE; MATHEMATICAL PHENOMENA; METAGENOME; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS; XANTHOMONAS ORYZAE; ALGORITHM; DNA SEQUENCE; ESCHERICHIA COLI; GENETICS; GENOMICS; HIGH THROUGHPUT SEQUENCING; PROCEDURES; REPRODUCIBILITY; SOFTWARE; XANTHOMONAS;

ALGORITHMS; BENCHMARKING; ESCHERICHIA COLI; GENOMICS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; REPRODUCIBILITY OF RESULTS; SEQUENCE ANALYSIS, DNA; SOFTWARE; XANTHOMONAS;

EID: 85007507215     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1604560113     Document Type: Article

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