Draft genome sequences of five new strains of Methylophilaceae isolated from Lake Washington sediment

Genome Announcements

Volumn 3, Issue 1, 2015, Pages

  McTaggart, Tami L ^a,c   Benuska, Gabrielle ^a   Shapiro, Nicole ^b   Woyke, Tanja ^b   Chistoserdova, Ludmila ^a  

^a University of Washington   (United States)

^b DOE JOINT GENOME INSTITUTE   (United States)

^c University of Irvine   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85007154298     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.01511-14     Document Type: Article

References (5)

1. Beck DAC, McTaggart TL, Setboonsarng U, Vorobev A, Kalyuzhnaya MG, Ivanova N, Goodwin L, Woyke T, Lidstrom ME, Chistoserdova L. 2014 The expanded diversity of Methylophilaceae from Lake Washington through cultivation and genomic sequencing of novel ecotypes. PLoS One 9:e102458. http://dx.doi.org/10.1371/journal.pone.0102458.
2. Oshkin I, Beck DAC, Lamb AE, Tchesnokova V, Benuska G, McTaggart TL, Kalyuzhnaya MG, Dedysh S, Lidstrom ME, Chistoserdova L. 2014. Methane fed microcosms show differential community dynamics and pinpoint specific taxa involved in communal response. ISME J, in press. http://dx.doi.org/10.1038/ismej.2014.203.
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4. Chin CS, Alexander DH, Marks P, Klammer AA, Drake J, Heiner C, Clum A, Copeland A, Huddleston J, Eichler EE, Turner SW, Korlach J. 2013 Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat Methods 10:563-569. http://dx.doi.org/10.1038/nmeth.2474.
5. Lapidus A, Clum A, LaButti K, Kalyuzhnaya MG, Lim S, Beck DAC, Glavina del Rio T, Nolan M, Mavromatis K, Huntemann M, Lucas S, Lidstrom ME, Ivanova N, Chistoserdova L. 2011. Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the Methylophilaceae. J Bacteriol 193:3757-3764. http://dx.doi.org/10.1128/JB.00404-11.