Full-length genome sequence of a variant porcine epidemic diarrhea virus strain, CH/GDZQ/2014, responsible for a severe outbreak of diarrhea in piglets in Guangdong, China, 2014

Genome Announcements

Volumn 2, Issue 6, 2014, Pages

  Song, Deping ^a   Chen, Yanjun ^a   Peng, Qi ^a   Huang, Dongyan ^a   Zhang, Tiansheng ^a   Huang, Tao ^a   Zhang, Fanfan ^a   Zhou, Xinrong ^a   Tang, Yuxin ^a  

^a JIANGXI AGRICULTURAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85005979542     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.01239-14     Document Type: Article

References (19)

1. Pensaert MB, de Bouck P. 1978. A new coronavirus-like particle associated with diarrhea in swine. Arch. Virol. 58:243-247. http://dx.doi.org/10.1007/BF01317606.
2. Song D, Park B. 2012. Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines. Virus Genes 44:167-175. http://dx.doi.org/10.1007/s11262-012-0713-1.
3. Bi J, Zeng S, Xiao S, Chen H, Fang L. 2012. Complete genome sequence of porcine epidemic diarrhea virus strain AJ1102 isolated from a suckling piglet with acute diarrhea in China. J. Virol. 86:10910-10911. http://dx.doi.org/10.1128/JVI.01919-12.
4. Chen J, Wang C, Shi H, Qiu H, Liu S, Chen X, Zhang Z, Feng L. 2010. Molecular epidemiology of porcine epidemic diarrhea virus in China. Arch. Virol. 155:1471-1476. http://dx.doi.org/10.1007/s00705-010-0720-2.
5. Chen J, Wang C, Shi H, Qiu HJ, Liu S, Shi D, Zhang X, Feng L. 2011. Complete genome sequence of a Chinese virulent porcine epidemic diarrhea virus strain. J. Virol. 85:11538-11539. http://dx.doi.org/10.1128/JVI.06024-11.
6. Li W, Li H, Liu Y, Pan Y, Deng F, Song Y, Tang X, He Q. 2012. New variants of porcine epidemic diarrhea virus, China, 2011. Emerg. Infect. Dis. 18:1350-1353. http://dx.doi.org/10.3201/eid1808.120002.
7. Stevenson GW, Hoang H, Schwartz KJ, Burrough ER, Sun D, Madson D, Cooper VL, Pillatzki A, Gauger P, Schmitt BJ, Koster LG, Killian ML, Yoon KJ. 2013. Emergence of porcine epidemic diarrhea virus in the United States: clinical signs, lesions, and viral genomic sequences. J. Vet. Diagn. Invest. 25: 649-654. http://dx.doi.org/10.1177/1040638713501675.
8. Luo Y, Zhang J, Deng X, Ye Y, Liao M, Fan H. 2012. Complete genome sequence of a highly prevalent isolate of porcine epidemic diarrhea virus in South China. J. Virol. 86:9551. http://dx.doi.org/10.1128/JVI.01455-12.
9. Tian Y, Su D, Zhang H, Chen RA, He D. 2013. Complete genome sequence of a very virulent porcine epidemic diarrhea virus strain, CH/GDGZ/2012, isolated in Southern China. Genome Announc. 1:(4): e00645-13. http://dx.doi.org/10.1128/genomeA.00645-13.
10. Fan H, Zhang J, Ye Y, Tong T, Xie K, Liao M. 2012. Complete genome sequence of a novel porcine epidemic diarrhea virus in South China. J. Virol. 86:10248-10249. http://dx.doi.org/10.1128/JVI.01589-12.
11. Wei ZY, Lu WH, Li ZL, Mo JY, Zeng XD, Zeng ZL, Sun BL, Chen F, Xie QM, Bee YZ, Ma JY. 2012. Complete genome sequence of novel porcine epidemic diarrhea virus strain GD-1 in China. J. Virol. 86:13824-13825. http://dx.doi.org/10.1128/JVI.02615-12.
12. Huang YW, Dickerman AW, Piñeyro P, Li L, Fang L, Kiehne R, Opriessnig T, Meng XJ. 2013. Origin, evolution, and genotyping of emergent porcine epidemic diarrhea virus strains in the United States. mBio 4:e00737-13. http://dx.doi.org/10.1128/mBio.00737-13.
13. Yang DQ, Ge FF, Ju HB, Wang J, Liu J, Ning K, Liu PH, Zhou JP, Sun QY. 2014. Whole-genome analysis of porcine epidemic diarrhea virus (PEDV) from eastern China. Arch. Virol. 159:2777-2785. http://dx.doi.org/10.1007/s00705-014-2102-7.
14. Gao Y, Kou Q, Ge X, Zhou L, Guo X, Yang H. 2013. Phylogenetic analysis of porcine epidemic diarrhea virus field strains prevailing recently in China. Arch. Virol. 158:711-715. http://dx.doi.org/10.1007/s00705-012-1541-2.
15. Marthaler D, Jiang Y, Otterson T, Goyal S, Rossow K, Collins J. 2013. Complete genome sequence of porcine epidemic diarrhea virus strain USA/Colorado/2013 from the United States. Genome Announc. 1(4): e00555-13. http://dx.doi.org/10.1128/genomeA.00555-13.
16. Wang L, Byrum B, Zhang Y. 2014. New variant of porcine epidemic diarrhea virus, United States, 2014. Emerg. Infect. Dis. 20:917-919. http://dx.doi.org/10.3201/eid2005.140195.
17. Kocherhans R, Bridgen A, Ackermann M, Tobler K. 2001. Completion of the porcine epidemic diarrhoea coronavirus (PEDV) genome sequence. Virus Genes 23:137-144. http://dx.doi.org/10.1023/A:1011831902219.
18. Sato T, Takeyama N, Katsumata A, Tuchiya K, Kodama T, Kusanagi K. 2011. Mutations in the spike gene of porcine epidemic diarrhea virus associated with growth adaptation in vitro and attenuation of virulence in vivo. Virus Genes 43:72-78. http://dx.doi.org/10.1007/s11262-011-0617-5.
19. Yeo SG, Hernandez M, Krell PJ, Nagy EE. 2003. Cloning and sequence analysis of the spike gene of porcine epidemic diarrhea virus Chinju99. Virus Genes 26:239-246. http://dx.doi.org/10.1023/A:1024443112717.