-
1
-
-
78649998799
-
Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes
-
Akhunov, E.D., Akhunova, A.R., Anderson, O.D., Anderson, J.A., Blake, N., Clegg, M.T., Coleman-Derr, D., Conley, E.J., Crossman, C.C., Deal, K.R., Dubcovsky, J., Gill, B.S., Gu, Y.Q., Hadam, J., Heo, H., Huo, N., Lazo, G.R., Luo, M.C., Ma, Y.Q., Matthews, D.E., McGuire, P.E., Morrell, P.L., Qualset, C.O., Renfro, J., Tabanao, D., Talbert, L.E., Tian, C., Toleno, D.M., Warburton, M.L., You, F.M., Zhang, W., Dvorak, J., Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics, 11, 2010, 702.
-
(2010)
BMC Genomics
, vol.11
, pp. 702
-
-
Akhunov, E.D.1
Akhunova, A.R.2
Anderson, O.D.3
Anderson, J.A.4
Blake, N.5
Clegg, M.T.6
Coleman-Derr, D.7
Conley, E.J.8
Crossman, C.C.9
Deal, K.R.10
Dubcovsky, J.11
Gill, B.S.12
Gu, Y.Q.13
Hadam, J.14
Heo, H.15
Huo, N.16
Lazo, G.R.17
Luo, M.C.18
Ma, Y.Q.19
Matthews, D.E.20
McGuire, P.E.21
Morrell, P.L.22
Qualset, C.O.23
Renfro, J.24
Tabanao, D.25
Talbert, L.E.26
Tian, C.27
Toleno, D.M.28
Warburton, M.L.29
You, F.M.30
Zhang, W.31
Dvorak, J.32
more..
-
2
-
-
0141703251
-
Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates
-
Akhunov, E.D., Akhunova, A.R., Linkiewicz, A.M., Dubcovsky, J., Hummel, D., Lazo, G., Chao, S., Anderson, O.D., David, J., Qi, L., Echalier, B., Gill, B.S., Miftahudin, Gustafson, J.P., La Rota, M., Sorrells, M.E., Zhang, D., Nguyen, H.T., Kalavacharla, V., Hossain, K., Kianian, S.F., Peng, J., Lapitan, N.L., Wennerlind, E.J., Nduati, V., Anderson, J.A., Sidhu, D., Gill, K.S., McGuire, P.E., Qualset, C.O., Dvorak, J., Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates. Proc. Natl. Acad. Sci. U. S. A. 100 (2003), 10836–10841.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 10836-10841
-
-
Akhunov, E.D.1
Akhunova, A.R.2
Linkiewicz, A.M.3
Dubcovsky, J.4
Hummel, D.5
Lazo, G.6
Chao, S.7
Anderson, O.D.8
David, J.9
Qi, L.10
Echalier, B.11
Gill, B.S.12
Miftahudin, Gustafson, J.P.13
La Rota, M.14
Sorrells, M.E.15
Zhang, D.16
Nguyen, H.T.17
Kalavacharla, V.18
Hossain, K.19
Kianian, S.F.20
Peng, J.21
Lapitan, N.L.22
Wennerlind, E.J.23
Nduati, V.24
Anderson, J.A.25
Sidhu, D.26
Gill, K.S.27
McGuire, P.E.28
Qualset, C.O.29
Dvorak, J.30
more..
-
3
-
-
84936817891
-
Sequencing chromosome 5D of Aegilops tauschii and comparison with its allopolyploid descendant bread wheat (Triticum aestivum)
-
Akpinar, B.A., Lucas, S.J., Vrana, J., Dolezel, J., Budak, H., Sequencing chromosome 5D of Aegilops tauschii and comparison with its allopolyploid descendant bread wheat (Triticum aestivum). Plant Biotechnol. J. 13 (2015), 740–752.
-
(2015)
Plant Biotechnol. J.
, vol.13
, pp. 740-752
-
-
Akpinar, B.A.1
Lucas, S.J.2
Vrana, J.3
Dolezel, J.4
Budak, H.5
-
4
-
-
51649150815
-
Nuclear DNA content of some important plant species
-
Arumuganathan, K., Earle, E.D., Nuclear DNA content of some important plant species. Plant Mol. Biol. Rep. 9 (1991), 208–218.
-
(1991)
Plant Mol. Biol. Rep.
, vol.9
, pp. 208-218
-
-
Arumuganathan, K.1
Earle, E.D.2
-
5
-
-
74049108922
-
BLAST+: architecture and applications
-
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., Madden, T.L., BLAST+: architecture and applications. BMC Bioinformatics, 10, 2009, 421.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 421
-
-
Camacho, C.1
Coulouris, G.2
Avagyan, V.3
Ma, N.4
Papadopoulos, J.5
Bealer, K.6
Madden, T.L.7
-
6
-
-
84925513772
-
A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome
-
Chapman, J.A., Mascher, M., Buluc, A., Barry, K., Georganas, E., Session, A., Strnadova, V., Jenkins, J., Sehgal, S., Oliker, L., Schmutz, J., Yelick, K.A., Scholz, U., Waugh, R., Poland, J.A., Muehlbauer, G.J., Stein, N., Rokhsar, D.S., A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome. Genome Biol., 16, 2015, 26.
-
(2015)
Genome Biol.
, vol.16
, pp. 26
-
-
Chapman, J.A.1
Mascher, M.2
Buluc, A.3
Barry, K.4
Georganas, E.5
Session, A.6
Strnadova, V.7
Jenkins, J.8
Sehgal, S.9
Oliker, L.10
Schmutz, J.11
Yelick, K.A.12
Scholz, U.13
Waugh, R.14
Poland, J.A.15
Muehlbauer, G.J.16
Stein, N.17
Rokhsar, D.S.18
-
7
-
-
84904390032
-
Structural and functional partitioning of bread wheat chromosome 3B
-
Choulet, F., Alberti, A., Theil, S., Glover, N., Barbe, V., Daron, J., Pingault, L., Sourdille, P., Couloux, A., Paux, E., Leroy, P., Mangenot, S., Guilhot, N., Le Gouis, J., Balfourier, F., Alaux, M., Jamilloux, V., Poulain, J., Durand, C., Bellec, A., Gaspin, C., Safar, J., Dolezel, J., Rogers, J., Vandepoele, K., Aury, J.M., Mayer, K., Berges, H., Quesneville, H., Wincker, P., Feuillet, C., Structural and functional partitioning of bread wheat chromosome 3B. Science, 345, 2014, 1249721.
-
(2014)
Science
, vol.345
, pp. 1249721
-
-
Choulet, F.1
Alberti, A.2
Theil, S.3
Glover, N.4
Barbe, V.5
Daron, J.6
Pingault, L.7
Sourdille, P.8
Couloux, A.9
Paux, E.10
Leroy, P.11
Mangenot, S.12
Guilhot, N.13
Le Gouis, J.14
Balfourier, F.15
Alaux, M.16
Jamilloux, V.17
Poulain, J.18
Durand, C.19
Bellec, A.20
Gaspin, C.21
Safar, J.22
Dolezel, J.23
Rogers, J.24
Vandepoele, K.25
Aury, J.M.26
Mayer, K.27
Berges, H.28
Quesneville, H.29
Wincker, P.30
Feuillet, C.31
more..
-
8
-
-
77955908237
-
Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces
-
Choulet, F., Wicker, T., Rustenholz, C., Paux, E., Salse, J., Leroy, P., Schlub, S., Le Paslier, M.C., Magdelenat, G., Gonthier, C., Couloux, A., Budak, H., Breen, J., Pumphrey, M., Liu, S., Kong, X., Jia, J., Gut, M., Brunel, D., Anderson, J.A., Gill, B.S., Appels, R., Keller, B., Feuillet, C., Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces. Plant Cell 22 (2010), 1686–1701.
-
(2010)
Plant Cell
, vol.22
, pp. 1686-1701
-
-
Choulet, F.1
Wicker, T.2
Rustenholz, C.3
Paux, E.4
Salse, J.5
Leroy, P.6
Schlub, S.7
Le Paslier, M.C.8
Magdelenat, G.9
Gonthier, C.10
Couloux, A.11
Budak, H.12
Breen, J.13
Pumphrey, M.14
Liu, S.15
Kong, X.16
Jia, J.17
Gut, M.18
Brunel, D.19
Anderson, J.A.20
Gill, B.S.21
Appels, R.22
Keller, B.23
Feuillet, C.24
more..
-
9
-
-
34347399464
-
Genome plasticity a key factor in the success of polyploid wheat under domestication
-
Dubcovsky, J., Dvorak, J., Genome plasticity a key factor in the success of polyploid wheat under domestication. Science 316 (2007), 1862–1866.
-
(2007)
Science
, vol.316
, pp. 1862-1866
-
-
Dubcovsky, J.1
Dvorak, J.2
-
10
-
-
26444545621
-
Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance
-
Dvorak, J., Akhunov, E.D., Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum alliance. Genetics 171 (2005), 323–332.
-
(2005)
Genetics
, vol.171
, pp. 323-332
-
-
Dvorak, J.1
Akhunov, E.D.2
-
11
-
-
84860464655
-
The origin of spelt and free-threshing hexaploid wheat
-
Dvorak, J., Deal, K.R., Luo, M.C., You, F.M., von Borstel, K., Dehghani, H., The origin of spelt and free-threshing hexaploid wheat. J. Hered. 103 (2012), 426–441.
-
(2012)
J. Hered.
, vol.103
, pp. 426-441
-
-
Dvorak, J.1
Deal, K.R.2
Luo, M.C.3
You, F.M.4
von Borstel, K.5
Dehghani, H.6
-
12
-
-
2642610283
-
Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing aegilops species
-
Dvorak, J., Luo, M.C., Yang, Z.L., Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing aegilops species. Genetics 148 (1998), 423–434.
-
(1998)
Genetics
, vol.148
, pp. 423-434
-
-
Dvorak, J.1
Luo, M.C.2
Yang, Z.L.3
-
13
-
-
0013069107
-
Inferred chromosome morphology of the ancestral genome of Triticum
-
Dvorak, J., Mcguire, P.E., Mendlinger, S., Inferred chromosome morphology of the ancestral genome of Triticum. Plant Syst. Evol. 144 (1984), 209–220.
-
(1984)
Plant Syst. Evol.
, vol.144
, pp. 209-220
-
-
Dvorak, J.1
Mcguire, P.E.2
Mendlinger, S.3
-
14
-
-
0027272045
-
The evolution of polyploid wheats: identification of the A genome donor species
-
Dvorak, J., Terlizzi, P., Zhang, H.B., Resta, P., The evolution of polyploid wheats: identification of the A genome donor species. Genome 36 (1993), 21–31.
-
(1993)
Genome
, vol.36
, pp. 21-31
-
-
Dvorak, J.1
Terlizzi, P.2
Zhang, H.B.3
Resta, P.4
-
15
-
-
10844286382
-
Deletion polymorphism in wheat chromosome regions with contrasting recombination rates
-
Dvorak, J., Yang, Z.L., You, F.M., Luo, M.C., Deletion polymorphism in wheat chromosome regions with contrasting recombination rates. Genetics 168 (2004), 1665–1675.
-
(2004)
Genetics
, vol.168
, pp. 1665-1675
-
-
Dvorak, J.1
Yang, Z.L.2
You, F.M.3
Luo, M.C.4
-
16
-
-
0025632914
-
Variation in repeated nucleotide sequences sheds light on the phylogeny of the wheat B and G genomes
-
Dvorak, J., Zhang, H.B., Variation in repeated nucleotide sequences sheds light on the phylogeny of the wheat B and G genomes. Proc. Natl. Acad. Sci. U. S. A. 87 (1990), 9640–9644.
-
(1990)
Proc. Natl. Acad. Sci. U. S. A.
, vol.87
, pp. 9640-9644
-
-
Dvorak, J.1
Zhang, H.B.2
-
17
-
-
85011078811
-
Cereals and us: time to renew an ancient bond
-
FAO, Cereals and us: time to renew an ancient bond. Save and Grow in Practice: Maize, Rice, Wheat, Chapter 1, 2016, 3–10.
-
(2016)
Save and Grow in Practice: Maize, Rice, Wheat, Chapter 1
, pp. 3-10
-
-
FAO1
-
18
-
-
70349288278
-
Genome evolution in allopolyploid wheat-a revolutionary reprogramming followed by gradual changes
-
Feldman, M., Levy, A.A., Genome evolution in allopolyploid wheat-a revolutionary reprogramming followed by gradual changes. J. Genet. Genomics 36 (2009), 511–518.
-
(2009)
J. Genet. Genomics
, vol.36
, pp. 511-518
-
-
Feldman, M.1
Levy, A.A.2
-
19
-
-
84941141643
-
Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B
-
Glover, N.M., Daron, J., Pingault, L., Vandepoele, K., Paux, E., Feuillet, C., Choulet, F., Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B. Genome Biol., 16, 2015, 188.
-
(2015)
Genome Biol.
, vol.16
, pp. 188
-
-
Glover, N.M.1
Daron, J.2
Pingault, L.3
Vandepoele, K.4
Paux, E.5
Feuillet, C.6
Choulet, F.7
-
20
-
-
84890011303
-
Consed: a graphical editor for next-generation sequencing
-
Gordon, D., Green, P., Consed: a graphical editor for next-generation sequencing. Bioinformatics 29 (2013), 2936–2937.
-
(2013)
Bioinformatics
, vol.29
, pp. 2936-2937
-
-
Gordon, D.1
Green, P.2
-
21
-
-
84873545544
-
Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome
-
Hastie, A.R., Dong, L., Smith, A., Finklestein, J., Lam, E.T., Huo, N., Cao, H., Kwok, P.Y., Deal, K.R., Dvorak, J., Luo, M.C., Gu, Y., Xiao, M., Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome. PLoS One, 8, 2013, e55864.
-
(2013)
PLoS One
, vol.8
, pp. e55864
-
-
Hastie, A.R.1
Dong, L.2
Smith, A.3
Finklestein, J.4
Lam, E.T.5
Huo, N.6
Cao, H.7
Kwok, P.Y.8
Deal, K.R.9
Dvorak, J.10
Luo, M.C.11
Gu, Y.12
Xiao, M.13
-
22
-
-
41149146663
-
The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences
-
Huo, N., Lazo, G.R., Vogel, J.P., You, F.M., Ma, Y., Hayden, D.M., Coleman-Derr, D., Hill, T.A., Dvorak, J., Anderson, O.D., Luo, M.C., Gu, Y.Q., The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences. Funct. Integr. Genomics 8 (2008), 135–147.
-
(2008)
Funct. Integr. Genomics
, vol.8
, pp. 135-147
-
-
Huo, N.1
Lazo, G.R.2
Vogel, J.P.3
You, F.M.4
Ma, Y.5
Hayden, D.M.6
Coleman-Derr, D.7
Hill, T.A.8
Dvorak, J.9
Anderson, O.D.10
Luo, M.C.11
Gu, Y.Q.12
-
23
-
-
76749150030
-
Genome sequencing and analysis of the model grass Brachypodium distachyon
-
International Brachypodium Initiative, Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463 (2010), 763–768.
-
(2010)
Nature
, vol.463
, pp. 763-768
-
-
International Brachypodium Initiative1
-
25
-
-
84904382612
-
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
-
International Wheat Genome Sequencing Consortium. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science, 345, 2014, 1251788.
-
(2014)
Science
, vol.345
, pp. 1251788
-
-
-
26
-
-
84875898037
-
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
-
Jia, J., Zhao, S., Kong, X., Li, Y., Zhao, G., He, W., Appels, R., Pfeifer, M., Tao, Y., Zhang, X., Jing, R., Zhang, C., Ma, Y., Gao, L., Gao, C., Spannagl, M., Mayer, K.F., Li, D., Pan, S., Zheng, F., Hu, Q., Xia, X., Li, J., Liang, Q., Chen, J., Wicker, T., Gou, C., Kuang, H., He, G., Luo, Y., Keller, B., Xia, Q., Lu, P., Wang, J., Zou, H., Zhang, R., Xu, J., Gao, J., Middleton, C., Quan, Z., Liu, G., Wang, J., International Wheat Genome Sequencing C., Yang, H., Liu, X., He, Z., Mao, L., Wang, J., Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation. Nature 496 (2013), 91–95.
-
(2013)
Nature
, vol.496
, pp. 91-95
-
-
Jia, J.1
Zhao, S.2
Kong, X.3
Li, Y.4
Zhao, G.5
He, W.6
Appels, R.7
Pfeifer, M.8
Tao, Y.9
Zhang, X.10
Jing, R.11
Zhang, C.12
Ma, Y.13
Gao, L.14
Gao, C.15
Spannagl, M.16
Mayer, K.F.17
Li, D.18
Pan, S.19
Zheng, F.20
Hu, Q.21
Xia, X.22
Li, J.23
Liang, Q.24
Chen, J.25
Wicker, T.26
Gou, C.27
Kuang, H.28
He, G.29
Luo, Y.30
Keller, B.31
Xia, Q.32
Lu, P.33
Wang, J.34
Zou, H.35
Zhang, R.36
Xu, J.37
Gao, J.38
Middleton, C.39
Quan, Z.40
Liu, G.41
Wang, J.42
International Wheat Genome Sequencing C.43
Yang, H.44
Liu, X.45
He, Z.46
Mao, L.47
Wang, J.48
more..
-
27
-
-
84891822189
-
Ensembl Genomes 2013: scaling up access to genome-wide data
-
Kersey, P.J., Allen, J.E., Christensen, M., Davis, P., Falin, L.J., Grabmueller, C., Hughes, D.S., Humphrey, J., Kerhornou, A., Khobova, J., Langridge, N., McDowall, M.D., Maheswari, U., Maslen, G., Nuhn, M., Ong, C.K., Paulini, M., Pedro, H., Toneva, I., Tuli, M.A., Walts, B., Williams, G., Wilson, D., Youens-Clark, K., Monaco, M.K., Stein, J., Wei, X., Ware, D., Bolser, D.M., Howe, K.L., Kulesha, E., Lawson, D., Staines, D.M., Ensembl Genomes 2013: scaling up access to genome-wide data. Nucleic Acids Res. 42 (2014), D546–D552.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D546-D552
-
-
Kersey, P.J.1
Allen, J.E.2
Christensen, M.3
Davis, P.4
Falin, L.J.5
Grabmueller, C.6
Hughes, D.S.7
Humphrey, J.8
Kerhornou, A.9
Khobova, J.10
Langridge, N.11
McDowall, M.D.12
Maheswari, U.13
Maslen, G.14
Nuhn, M.15
Ong, C.K.16
Paulini, M.17
Pedro, H.18
Toneva, I.19
Tuli, M.A.20
Walts, B.21
Williams, G.22
Wilson, D.23
Youens-Clark, K.24
Monaco, M.K.25
Stein, J.26
Wei, X.27
Ware, D.28
Bolser, D.M.29
Howe, K.L.30
Kulesha, E.31
Lawson, D.32
Staines, D.M.33
more..
-
28
-
-
0001018539
-
Discovery of the DD-analyser, one of the ancestors of Triticum vulgare
-
Kihara, H., Discovery of the DD-analyser, one of the ancestors of Triticum vulgare. Agri. Hort. 19 (1944), 13–14.
-
(1944)
Agri. Hort.
, vol.19
, pp. 13-14
-
-
Kihara, H.1
-
29
-
-
69649109364
-
Circos: an information aesthetic for comparative genomics
-
Krzywinski, M., Schein, J., Birol, I., Connors, J., Gascoyne, R., Horsman, D., Jones, S.J., Marra, M.A., Circos: an information aesthetic for comparative genomics. Genome Res. 19 (2009), 1639–1645.
-
(2009)
Genome Res.
, vol.19
, pp. 1639-1645
-
-
Krzywinski, M.1
Schein, J.2
Birol, I.3
Connors, J.4
Gascoyne, R.5
Horsman, D.6
Jones, S.J.7
Marra, M.A.8
-
30
-
-
84945218567
-
Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes
-
Kumar, A., Seetan, R., Mergoum, M., Tiwari, V.K., Iqbal, M.J., Wang, Y., Al-Azzam, O., Simkova, H., Luo, M.C., Dvorak, J., Gu, Y.Q., Denton, A., Kilian, A., Lazo, G.R., Kianian, S.F., Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes. BMC Genomics, 16, 2015, 800.
-
(2015)
BMC Genomics
, vol.16
, pp. 800
-
-
Kumar, A.1
Seetan, R.2
Mergoum, M.3
Tiwari, V.K.4
Iqbal, M.J.5
Wang, Y.6
Al-Azzam, O.7
Simkova, H.8
Luo, M.C.9
Dvorak, J.10
Gu, Y.Q.11
Denton, A.12
Kilian, A.13
Lazo, G.R.14
Kianian, S.F.15
-
31
-
-
1542338594
-
Genomic duplication, fractionation and the origin of regulatory novelty
-
Langham, R.J., Walsh, J., Dunn, M., Ko, C., Goff, S.A., Freeling, M., Genomic duplication, fractionation and the origin of regulatory novelty. Genetics 166 (2004), 935–945.
-
(2004)
Genetics
, vol.166
, pp. 935-945
-
-
Langham, R.J.1
Walsh, J.2
Dunn, M.3
Ko, C.4
Goff, S.A.5
Freeling, M.6
-
32
-
-
77953218382
-
A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454
-
Lennon, N.J., Lintner, R.E., Anderson, S., Alvarez, P., Barry, A., Brockman, W., Daza, R., Erlich, R.L., Giannoukos, G., Green, L., Hollinger, A., Hoover, C.A., Jaffe, D.B., Juhn, F., McCarthy, D., Perrin, D., Ponchner, K., Powers, T.L., Rizzolo, K., Robbins, D., Ryan, E., Russ, C., Sparrow, T., Stalker, J., Steelman, S., Weiand, M., Zimmer, A., Henn, M.R., Nusbaum, C., Nicol, R., A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454. Genome Biol., 11, 2010, R15.
-
(2010)
Genome Biol.
, vol.11
, pp. R15
-
-
Lennon, N.J.1
Lintner, R.E.2
Anderson, S.3
Alvarez, P.4
Barry, A.5
Brockman, W.6
Daza, R.7
Erlich, R.L.8
Giannoukos, G.9
Green, L.10
Hollinger, A.11
Hoover, C.A.12
Jaffe, D.B.13
Juhn, F.14
McCarthy, D.15
Perrin, D.16
Ponchner, K.17
Powers, T.L.18
Rizzolo, K.19
Robbins, D.20
Ryan, E.21
Russ, C.22
Sparrow, T.23
Stalker, J.24
Steelman, S.25
Weiand, M.26
Zimmer, A.27
Henn, M.R.28
Nusbaum, C.29
Nicol, R.30
more..
-
33
-
-
84863829703
-
TriAnnot: a versatile and high performance pipeline for the automated annotation of plant genomes
-
Leroy, P., Guilhot, N., Sakai, H., Bernard, A., Choulet, F., Theil, S., Reboux, S., Amano, N., Flutre, T., Pelegrin, C., Ohyanagi, H., Seidel, M., Giacomoni, F., Reichstadt, M., Alaux, M., Gicquello, E., Legeai, F., Cerutti, L., Numa, H., Tanaka, T., Mayer, K., Itoh, T., Quesneville, H., Feuillet, C., TriAnnot: a versatile and high performance pipeline for the automated annotation of plant genomes. Front. Plant. Sci., 3, 2012, 5.
-
(2012)
Front. Plant. Sci.
, vol.3
, pp. 5
-
-
Leroy, P.1
Guilhot, N.2
Sakai, H.3
Bernard, A.4
Choulet, F.5
Theil, S.6
Reboux, S.7
Amano, N.8
Flutre, T.9
Pelegrin, C.10
Ohyanagi, H.11
Seidel, M.12
Giacomoni, F.13
Reichstadt, M.14
Alaux, M.15
Gicquello, E.16
Legeai, F.17
Cerutti, L.18
Numa, H.19
Tanaka, T.20
Mayer, K.21
Itoh, T.22
Quesneville, H.23
Feuillet, C.24
more..
-
34
-
-
84903618373
-
mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat
-
Li, A., Liu, D., Wu, J., Zhao, X., Hao, M., Geng, S., Yan, J., Jiang, X., Zhang, L., Wu, J., Yin, L., Zhang, R., Wu, L., Zheng, Y., Mao, L., mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat. Plant Cell 26 (2014), 1878–1900.
-
(2014)
Plant Cell
, vol.26
, pp. 1878-1900
-
-
Li, A.1
Liu, D.2
Wu, J.3
Zhao, X.4
Hao, M.5
Geng, S.6
Yan, J.7
Jiang, X.8
Zhang, L.9
Wu, J.10
Yin, L.11
Zhang, R.12
Wu, L.13
Zheng, Y.14
Mao, L.15
-
35
-
-
77949587649
-
Fast and accurate long-read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R., Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 26 (2010), 589–595.
-
(2010)
Bioinformatics
, vol.26
, pp. 589-595
-
-
Li, H.1
Durbin, R.2
-
36
-
-
84875886528
-
Draft genome of the wheat A-genome progenitor Triticum urartu
-
Ling, H.Q., Zhao, S., Liu, D., Wang, J., Sun, H., Zhang, C., Fan, H., Li, D., Dong, L., Tao, Y., Gao, C., Wu, H., Li, Y., Cui, Y., Guo, X., Zheng, S., Wang, B., Yu, K., Liang, Q., Yang, W., Lou, X., Chen, J., Feng, M., Jian, J., Zhang, X., Luo, G., Jiang, Y., Liu, J., Wang, Z., Sha, Y., Zhang, B., Wu, H., Tang, D., Shen, Q., Xue, P., Zou, S., Wang, X., Liu, X., Wang, F., Yang, Y., An, X., Dong, Z., Zhang, K., Zhang, X., Luo, M.C., Dvorak, J., Tong, Y., Wang, J., Yang, H., Li, Z., Wang, D., Zhang, A., Wang, J., Draft genome of the wheat A-genome progenitor Triticum urartu. Nature 496 (2013), 87–90.
-
(2013)
Nature
, vol.496
, pp. 87-90
-
-
Ling, H.Q.1
Zhao, S.2
Liu, D.3
Wang, J.4
Sun, H.5
Zhang, C.6
Fan, H.7
Li, D.8
Dong, L.9
Tao, Y.10
Gao, C.11
Wu, H.12
Li, Y.13
Cui, Y.14
Guo, X.15
Zheng, S.16
Wang, B.17
Yu, K.18
Liang, Q.19
Yang, W.20
Lou, X.21
Chen, J.22
Feng, M.23
Jian, J.24
Zhang, X.25
Luo, G.26
Jiang, Y.27
Liu, J.28
Wang, Z.29
Sha, Y.30
Zhang, B.31
Wu, H.32
Tang, D.33
Shen, Q.34
Xue, P.35
Zou, S.36
Wang, X.37
Liu, X.38
Wang, F.39
Yang, Y.40
An, X.41
Dong, Z.42
Zhang, K.43
Zhang, X.44
Luo, M.C.45
Dvorak, J.46
Tong, Y.47
Wang, J.48
Yang, H.49
Li, Z.50
Wang, D.51
Zhang, A.52
Wang, J.53
more..
-
37
-
-
0000764225
-
Conspectus of the Triticeae
-
Love, A., Conspectus of the Triticeae. Feddes Repert. 95 (1984), 425–521.
-
(1984)
Feddes Repert.
, vol.95
, pp. 425-521
-
-
Love, A.1
-
38
-
-
70349471296
-
Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae
-
Luo, M.C., Deal, K.R., Akhunov, E.D., Akhunova, A.R., Anderson, O.D., Anderson, J.A., Blake, N., Clegg, M.T., Coleman-Derr, D., Conley, E.J., Crossman, C.C., Dubcovsky, J., Gill, B.S., Gu, Y.Q., Hadam, J., Heo, H.Y., Huo, N., Lazo, G., Ma, Y., Matthews, D.E., McGuire, P.E., Morrell, P.L., Qualset, C.O., Renfro, J., Tabanao, D., Talbert, L.E., Tian, C., Toleno, D.M., Warburton, M.L., You, F.M., Zhang, W., Dvorak, J., Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae. Proc. Natl. Acad. Sci. U. S. A. 106 (2009), 15780–15785.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 15780-15785
-
-
Luo, M.C.1
Deal, K.R.2
Akhunov, E.D.3
Akhunova, A.R.4
Anderson, O.D.5
Anderson, J.A.6
Blake, N.7
Clegg, M.T.8
Coleman-Derr, D.9
Conley, E.J.10
Crossman, C.C.11
Dubcovsky, J.12
Gill, B.S.13
Gu, Y.Q.14
Hadam, J.15
Heo, H.Y.16
Huo, N.17
Lazo, G.18
Ma, Y.19
Matthews, D.E.20
McGuire, P.E.21
Morrell, P.L.22
Qualset, C.O.23
Renfro, J.24
Tabanao, D.25
Talbert, L.E.26
Tian, C.27
Toleno, D.M.28
Warburton, M.L.29
You, F.M.30
Zhang, W.31
Dvorak, J.32
more..
-
39
-
-
84877344186
-
A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor
-
Luo, M.C., Gu, Y.Q., You, F.M., Deal, K.R., Ma, Y., Hu, Y., Huo, N., Wang, Y., Wang, J., Chen, S., Jorgensen, C.M., Zhang, Y., McGuire, P.E., Pasternak, S., Stein, J.C., Ware, D., Kramer, M., McCombie, W.R., Kianian, S.F., Martis, M.M., Mayer, K.F., Sehgal, S.K., Li, W., Gill, B.S., Bevan, M.W., Simkova, H., Dolezel, J., Weining, S., Lazo, G.R., Anderson, O.D., Dvorak, J., A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. Proc. Natl. Acad. Sci. U. S. A. 110 (2013), 7940–7945.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 7940-7945
-
-
Luo, M.C.1
Gu, Y.Q.2
You, F.M.3
Deal, K.R.4
Ma, Y.5
Hu, Y.6
Huo, N.7
Wang, Y.8
Wang, J.9
Chen, S.10
Jorgensen, C.M.11
Zhang, Y.12
McGuire, P.E.13
Pasternak, S.14
Stein, J.C.15
Ware, D.16
Kramer, M.17
McCombie, W.R.18
Kianian, S.F.19
Martis, M.M.20
Mayer, K.F.21
Sehgal, S.K.22
Li, W.23
Gill, B.S.24
Bevan, M.W.25
Simkova, H.26
Dolezel, J.27
Weining, S.28
Lazo, G.R.29
Anderson, O.D.30
Dvorak, J.31
more..
-
40
-
-
77649313937
-
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species
-
Luo, M.C., Ma, Y., You, F.M., Anderson, O.D., Kopecky, D., Simkova, H., Safar, J., Dolezel, J., Gill, B., McGuire, P.E., Dvorak, J., Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species. BMC Genomics, 11, 2010, 122.
-
(2010)
BMC Genomics
, vol.11
, pp. 122
-
-
Luo, M.C.1
Ma, Y.2
You, F.M.3
Anderson, O.D.4
Kopecky, D.5
Simkova, H.6
Safar, J.7
Dolezel, J.8
Gill, B.9
McGuire, P.E.10
Dvorak, J.11
-
41
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies, M., Egholm, M., Altman, W.E., Attiya, S., Bader, J.S., Bemben, L.A., Berka, J., Braverman, M.S., Chen, Y.J., Chen, Z., Dewell, S.B., Du, L., Fierro, J.M., Gomes, X.V., Godwin, B.C., He, W., Helgesen, S., Ho, C.H., Irzyk, G.P., Jando, S.C., Alenquer, M.L., Jarvie, T.P., Jirage, K.B., Kim, J.B., Knight, J.R., Lanza, J.R., Leamon, J.H., Lefkowitz, S.M., Lei, M., Li, J., Lohman, K.L., Lu, H., Makhijani, V.B., McDade, K.E., McKenna, M.P., Myers, E.W., Nickerson, E., Nobile, J.R., Plant, R., Puc, B.P., Ronan, M.T., Roth, G.T., Sarkis, G.J., Simons, J.F., Simpson, J.W., Srinivasan, M., Tartaro, K.R., Tomasz, A., Vogt, K.A., Volkmer, G.A., Wang, S.H., Wang, Y., Weiner, M.P., Yu, P., Begley, R.F., Rothberg, J.M., Genome sequencing in microfabricated high-density picolitre reactors. Nature 437 (2005), 376–380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
Lohman, K.L.31
Lu, H.32
Makhijani, V.B.33
McDade, K.E.34
McKenna, M.P.35
Myers, E.W.36
Nickerson, E.37
Nobile, J.R.38
Plant, R.39
Puc, B.P.40
Ronan, M.T.41
Roth, G.T.42
Sarkis, G.J.43
Simons, J.F.44
Simpson, J.W.45
Srinivasan, M.46
Tartaro, K.R.47
Tomasz, A.48
Vogt, K.A.49
Volkmer, G.A.50
Wang, S.H.51
Wang, Y.52
Weiner, M.P.53
Yu, P.54
Begley, R.F.55
Rothberg, J.M.56
more..
-
42
-
-
80052146245
-
Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes
-
Massa, A.N., Wanjugi, H., Deal, K.R., O'Brien, K., You, F.M., Maiti, R., Chan, A.P., Gu, Y.Q., Luo, M.C., Anderson, O.D., Rabinowicz, P.D., Dvorak, J., Devos, K.M., Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes. Mol. Biol. Evol. 28 (2011), 2537–2547.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2537-2547
-
-
Massa, A.N.1
Wanjugi, H.2
Deal, K.R.3
O'Brien, K.4
You, F.M.5
Maiti, R.6
Chan, A.P.7
Gu, Y.Q.8
Luo, M.C.9
Anderson, O.D.10
Rabinowicz, P.D.11
Dvorak, J.12
Devos, K.M.13
-
43
-
-
77957217584
-
The origin of Triticum spelta and its free-threshing hexaploid relatives
-
Mc, F.E., Sears, E.R., The origin of Triticum spelta and its free-threshing hexaploid relatives. J. Hered. 37 (1946), 107–116.
-
(1946)
J. Hered.
, vol.37
, pp. 107-116
-
-
Mc, F.E.1
Sears, E.R.2
-
44
-
-
78651103895
-
Catalogue of gene symbols for wheat
-
McIntosh, R.A., Yamazaki, Y., Dubcovsky, J., Rogers, W.J., Morris, C., Appels, R., Xia, X.C., Catalogue of gene symbols for wheat. 12th International Wheat Genetic Symposium, Yokohama, Japan, 2013.
-
(2013)
12th International Wheat Genetic Symposium, Yokohama, Japan
-
-
McIntosh, R.A.1
Yamazaki, Y.2
Dubcovsky, J.3
Rogers, W.J.4
Morris, C.5
Appels, R.6
Xia, X.C.7
-
45
-
-
0001801997
-
From stable crop to extinction? The archaeology and history of the hulled wheats
-
S. Padulosi K.,J.,H. Hammer International Plant Genetic Resources Institute Rome
-
Nesbitt, M., Samuels, D.C., From stable crop to extinction? The archaeology and history of the hulled wheats. Padulosi, S., Hammer, K.,J.,H., (eds.) Hulled Wheats, 1996, International Plant Genetic Resources Institute, Rome, 41–100.
-
(1996)
Hulled Wheats
, pp. 41-100
-
-
Nesbitt, M.1
Samuels, D.C.2
-
46
-
-
84876548209
-
MIPS PlantsDB: a database framework for comparative plant genome research
-
Nussbaumer, T., Martis, M.M., Roessner, S.K., Pfeifer, M., Bader, K.C., Sharma, S., Gundlach, H., Spannagl, M., MIPS PlantsDB: a database framework for comparative plant genome research. Nucleic Acids Res. 41 (2013), D1144–D1151.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D1144-D1151
-
-
Nussbaumer, T.1
Martis, M.M.2
Roessner, S.K.3
Pfeifer, M.4
Bader, K.C.5
Sharma, S.6
Gundlach, H.7
Spannagl, M.8
-
47
-
-
0003515251
-
Evolution by Gene Duplication
-
Springer Berlin Heidelberg
-
Ohno, S., Evolution by Gene Duplication. 1970, Springer, Berlin Heidelberg.
-
(1970)
-
-
Ohno, S.1
-
48
-
-
84893978887
-
The origin of unusual chromosome constitutions among newly formed allopolyploids
-
Oleszczuk, S., Lukaszewski, A.J., The origin of unusual chromosome constitutions among newly formed allopolyploids. Am. J. Bot. 101 (2014), 318–326.
-
(2014)
Am. J. Bot.
, vol.101
, pp. 318-326
-
-
Oleszczuk, S.1
Lukaszewski, A.J.2
-
49
-
-
58449137410
-
The Sorghum bicolor genome and the diversification of grasses
-
Paterson, A.H., Bowers, J.E., Bruggmann, R., Dubchak, I., Grimwood, J., Gundlach, H., Haberer, G., Hellsten, U., Mitros, T., Poliakov, A., Schmutz, J., Spannagl, M., Tang, H., Wang, X., Wicker, T., Bharti, A.K., Chapman, J., Feltus, F.A., Gowik, U., Grigoriev, I.V., Lyons, E., Maher, C.A., Martis, M., Narechania, A., Otillar, R.P., Penning, B.W., Salamov, A.A., Wang, Y., Zhang, L., Carpita, N.C., Freeling, M., Gingle, A.R., Hash, C.T., Keller, B., Klein, P., Kresovich, S., McCann, M.C., Ming, R., Peterson, D.G., Mehboob ur, R., Ware, D., Westhoff, P., Mayer, K.F., Messing, J., Rokhsar, D.S., The Sorghum bicolor genome and the diversification of grasses. Nature 457 (2009), 551–556.
-
(2009)
Nature
, vol.457
, pp. 551-556
-
-
Paterson, A.H.1
Bowers, J.E.2
Bruggmann, R.3
Dubchak, I.4
Grimwood, J.5
Gundlach, H.6
Haberer, G.7
Hellsten, U.8
Mitros, T.9
Poliakov, A.10
Schmutz, J.11
Spannagl, M.12
Tang, H.13
Wang, X.14
Wicker, T.15
Bharti, A.K.16
Chapman, J.17
Feltus, F.A.18
Gowik, U.19
Grigoriev, I.V.20
Lyons, E.21
Maher, C.A.22
Martis, M.23
Narechania, A.24
Otillar, R.P.25
Penning, B.W.26
Salamov, A.A.27
Wang, Y.28
Zhang, L.29
Carpita, N.C.30
Freeling, M.31
Gingle, A.R.32
Hash, C.T.33
Keller, B.34
Klein, P.35
Kresovich, S.36
McCann, M.C.37
Ming, R.38
Peterson, D.G.39
Mehboob ur, R.40
Ware, D.41
Westhoff, P.42
Mayer, K.F.43
Messing, J.44
Rokhsar, D.S.45
more..
-
50
-
-
0038550526
-
Nuclear DNA and evolution of wheat
-
Rees, H., Walters, M.R., Nuclear DNA and evolution of wheat. Heredity 20 (1965), 73–82.
-
(1965)
Heredity
, vol.20
, pp. 73-82
-
-
Rees, H.1
Walters, M.R.2
-
51
-
-
77955284781
-
Development of chromosome-specific BAC resources for genomics of bread wheat
-
Safar, J., Simkova, H., Kubalakova, M., Cihalikova, J., Suchankova, P., Bartos, J., Dolezel, J., Development of chromosome-specific BAC resources for genomics of bread wheat. Cytogenet. Genome Res. 129 (2010), 211–223.
-
(2010)
Cytogenet. Genome Res.
, vol.129
, pp. 211-223
-
-
Safar, J.1
Simkova, H.2
Kubalakova, M.3
Cihalikova, J.4
Suchankova, P.5
Bartos, J.6
Dolezel, J.7
-
52
-
-
84937699889
-
RepeatMasker Open-4.0
-
Smit, A., Hubley, R., Green, P., RepeatMasker Open-4.0. 2015 http://www.repeatmasker.org/.
-
(2015)
-
-
Smit, A.1
Hubley, R.2
Green, P.3
-
53
-
-
84975475885
-
BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes
-
Stankova, H., Hastie, A.R., Chan, S., Vrana, J., Tulpova, Z., Kubalakova, M., Visendi, P., Hayashi, S., Luo, M., Batley, J., Edwards, D., Dolezel, J., Simkova, H., BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes. Plant Biotechnol. J. 14 (2016), 1523–1531.
-
(2016)
Plant Biotechnol. J.
, vol.14
, pp. 1523-1531
-
-
Stankova, H.1
Hastie, A.R.2
Chan, S.3
Vrana, J.4
Tulpova, Z.5
Kubalakova, M.6
Visendi, P.7
Hayashi, S.8
Luo, M.9
Batley, J.10
Edwards, D.11
Dolezel, J.12
Simkova, H.13
-
54
-
-
84939170283
-
ALLMAPS: robust scaffold ordering based on multiple maps
-
Tang, H., Zhang, X., Miao, C., Zhang, J., Ming, R., Schnable, J.C., Schnable, P.S., Lyons, E., Lu, J., ALLMAPS: robust scaffold ordering based on multiple maps. Genome Biol., 16, 2015, 3.
-
(2015)
Genome Biol.
, vol.16
, pp. 3
-
-
Tang, H.1
Zhang, X.2
Miao, C.3
Zhang, J.4
Ming, R.5
Schnable, J.C.6
Schnable, P.S.7
Lyons, E.8
Lu, J.9
-
55
-
-
84876413103
-
Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat
-
Wang, J., Luo, M.C., Chen, Z., You, F.M., Wei, Y., Zheng, Y., Dvorak, J., Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat. New Phytol. 198 (2013), 925–937.
-
(2013)
New Phytol.
, vol.198
, pp. 925-937
-
-
Wang, J.1
Luo, M.C.2
Chen, Z.3
You, F.M.4
Wei, Y.5
Zheng, Y.6
Dvorak, J.7
-
56
-
-
84904727598
-
Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array
-
Wang, S., Wong, D., Forrest, K., Allen, A., Chao, S., Huang, B.E., Maccaferri, M., Salvi, S., Milner, S.G., Cattivelli, L., Mastrangelo, A.M., Whan, A., Stephen, S., Barker, G., Wieseke, R., Plieske, J., International Wheat Genome Sequencing, C., Lillemo, M., Mather, D., Appels, R., Dolferus, R., Brown-Guedira, G., Korol, A., Akhunova, A.R., Feuillet, C., Salse, J., Morgante, M., Pozniak, C., Luo, M.C., Dvorak, J., Morell, M., Dubcovsky, J., Ganal, M., Tuberosa, R., Lawley, C., Mikoulitch, I., Cavanagh, C., Edwards, K.J., Hayden, M., Akhunov, E., Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array. Plant Biotechnol. J. 12 (2014), 787–796.
-
(2014)
Plant Biotechnol. J.
, vol.12
, pp. 787-796
-
-
Wang, S.1
Wong, D.2
Forrest, K.3
Allen, A.4
Chao, S.5
Huang, B.E.6
Maccaferri, M.7
Salvi, S.8
Milner, S.G.9
Cattivelli, L.10
Mastrangelo, A.M.11
Whan, A.12
Stephen, S.13
Barker, G.14
Wieseke, R.15
Plieske, J.16
International Wheat Genome Sequencing, C.,17
Lillemo, M.18
Mather, D.19
Appels, R.20
Dolferus, R.21
Brown-Guedira, G.22
Korol, A.23
Akhunova, A.R.24
Feuillet, C.25
Salse, J.26
Morgante, M.27
Pozniak, C.28
Luo, M.C.29
Dvorak, J.30
Morell, M.31
Dubcovsky, J.32
Ganal, M.33
Tuberosa, R.34
Lawley, C.35
Mikoulitch, I.36
Cavanagh, C.37
Edwards, K.J.38
Hayden, M.39
Akhunov, E.40
more..
-
57
-
-
84860137835
-
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
-
Wang, Y., Tang, H., Debarry, J.D., Tan, X., Li, J., Wang, X., Lee, T.H., Jin, H., Marler, B., Guo, H., Kissinger, J.C., Paterson, A.H., MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity. Nucleic Acids Res., 40, 2012, e49.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. e49
-
-
Wang, Y.1
Tang, H.2
Debarry, J.D.3
Tan, X.4
Li, J.5
Wang, X.6
Lee, T.H.7
Jin, H.8
Marler, B.9
Guo, H.10
Kissinger, J.C.11
Paterson, A.H.12
-
58
-
-
33745965482
-
Bringing wild relatives back into the family: recovering genetic diversity in CIMMYT improved wheat germplasm
-
Warburton, M.L., Crossa, J., Franco, J., Kazi, M., Trethowan, R., Rajaram, S., Pfeiffer, W., Zhang, P., Dreisigacker, S., van Ginkel, M., Bringing wild relatives back into the family: recovering genetic diversity in CIMMYT improved wheat germplasm. Euphytica 149 (2006), 289–301.
-
(2006)
Euphytica
, vol.149
, pp. 289-301
-
-
Warburton, M.L.1
Crossa, J.2
Franco, J.3
Kazi, M.4
Trethowan, R.5
Rajaram, S.6
Pfeiffer, W.7
Zhang, P.8
Dreisigacker, S.9
van Ginkel, M.10
-
59
-
-
77951820899
-
Fast and SNP-tolerant detection of complex variants and splicing in short reads
-
Wu, T.D., Nacu, S., Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics 26 (2010), 873–881.
-
(2010)
Bioinformatics
, vol.26
, pp. 873-881
-
-
Wu, T.D.1
Nacu, S.2
-
60
-
-
84874710448
-
gKaKs: the pipeline for genome-level Ka/Ks calculation
-
Zhang, C., Wang, J., Long, M., Fan, C., gKaKs: the pipeline for genome-level Ka/Ks calculation. Bioinformatics 29 (2013), 645–646.
-
(2013)
Bioinformatics
, vol.29
, pp. 645-646
-
-
Zhang, C.1
Wang, J.2
Long, M.3
Fan, C.4
-
61
-
-
84888316492
-
Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation
-
Zhang, H., Bian, Y., Gou, X., Dong, Y., Rustgi, S., Zhang, B., Xu, C., Li, N., Qi, B., Han, F., von Wettstein, D., Liu, B., Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation. Proc. Natl. Acad. Sci. U. S. A. 110 (2013), 19466–19471.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 19466-19471
-
-
Zhang, H.1
Bian, Y.2
Gou, X.3
Dong, Y.4
Rustgi, S.5
Zhang, B.6
Xu, C.7
Li, N.8
Qi, B.9
Han, F.10
von Wettstein, D.11
Liu, B.12
-
62
-
-
84864867560
-
Total centromere size and genome size are strongly correlated in ten grass species
-
Zhang, H., Dawe, R.K., Total centromere size and genome size are strongly correlated in ten grass species. Chromosome Res. 20 (2012), 403–412.
-
(2012)
Chromosome Res.
, vol.20
, pp. 403-412
-
-
Zhang, H.1
Dawe, R.K.2
-
63
-
-
84995466960
-
Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences
-
Zhang, J., Kudrna, D., Mu, T., Li, W., Copetti, D., Yu, Y., Goicoechea, J.L., Lei, Y., Wing, R.A., Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences. Bioinformatics 32 (2016), 3058–3064.
-
(2016)
Bioinformatics
, vol.32
, pp. 3058-3064
-
-
Zhang, J.1
Kudrna, D.2
Mu, T.3
Li, W.4
Copetti, D.5
Yu, Y.6
Goicoechea, J.L.7
Lei, Y.8
Wing, R.A.9
-
64
-
-
84929171720
-
Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
-
Zhang, T., Hu, Y., Jiang, W., Fang, L., Guan, X., Chen, J., Zhang, J., Saski, C.A., Scheffler, B.E., Stelly, D.M., Hulse-Kemp, A.M., Wan, Q., Liu, B., Liu, C., Wang, S., Pan, M., Wang, Y., Wang, D., Ye, W., Chang, L., Zhang, W., Song, Q., Kirkbride, R.C., Chen, X., Dennis, E., Llewellyn, D.J., Peterson, D.G., Thaxton, P., Jones, D.C., Wang, Q., Xu, X., Zhang, H., Wu, H., Zhou, L., Mei, G., Chen, S., Tian, Y., Xiang, D., Li, X., Ding, J., Zuo, Q., Tao, L., Liu, Y., Li, J., Lin, Y., Hui, Y., Cao, Z., Cai, C., Zhu, X., Jiang, Z., Zhou, B., Guo, W., Li, R., Chen, Z.J., Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement. Nat. Biotechnol. 33 (2015), 531–537.
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 531-537
-
-
Zhang, T.1
Hu, Y.2
Jiang, W.3
Fang, L.4
Guan, X.5
Chen, J.6
Zhang, J.7
Saski, C.A.8
Scheffler, B.E.9
Stelly, D.M.10
Hulse-Kemp, A.M.11
Wan, Q.12
Liu, B.13
Liu, C.14
Wang, S.15
Pan, M.16
Wang, Y.17
Wang, D.18
Ye, W.19
Chang, L.20
Zhang, W.21
Song, Q.22
Kirkbride, R.C.23
Chen, X.24
Dennis, E.25
Llewellyn, D.J.26
Peterson, D.G.27
Thaxton, P.28
Jones, D.C.29
Wang, Q.30
Xu, X.31
Zhang, H.32
Wu, H.33
Zhou, L.34
Mei, G.35
Chen, S.36
Tian, Y.37
Xiang, D.38
Li, X.39
Ding, J.40
Zuo, Q.41
Tao, L.42
Liu, Y.43
Li, J.44
Lin, Y.45
Hui, Y.46
Cao, Z.47
Cai, C.48
Zhu, X.49
Jiang, Z.50
Zhou, B.51
Guo, W.52
Li, R.53
Chen, Z.J.54
more..
-
65
-
-
79960125436
-
Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat
-
Zhao, N., Zhu, B., Li, M., Wang, L., Xu, L., Zhang, H., Zheng, S., Qi, B., Han, F., Liu, B., Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat. Genetics 188 (2011), 499–510.
-
(2011)
Genetics
, vol.188
, pp. 499-510
-
-
Zhao, N.1
Zhu, B.2
Li, M.3
Wang, L.4
Xu, L.5
Zhang, H.6
Zheng, S.7
Qi, B.8
Han, F.9
Liu, B.10
|