Five new species and one new record of Astrothelium (Trypetheliaceae, Ascomycota) from Thailand

Lichenologist

Volumn 48, Issue 6, 2016, Pages 727-737

  Luangsuphabool, Theerapat ^a   Lumbsch, H Thorsten ^b   Aptroot, André ^c   Piapukiew, Jittra ^a   Sangvichien, Ek ^d  

^a CHULALONGKORN UNIVERSITY   (Thailand)

^b FIELD MUSEUM OF NATURAL HISTORY   (United States)

^c ABL HERBARIUM   (Netherlands)

^d RAMKHAMHAENG UNIVERSITY   (Thailand)

Author keywords

lichen forming fungi; phylogeny; taxonomy; tropical lichens; Trypetheliales

Indexed keywords

EID: 85003881321     PISSN: 00242829     EISSN: 10961135     Source Type: Journal    
DOI: 10.1017/S0024282916000499     Document Type: Article

References (35)

1. Aptroot, A. (2009). Trypetheliaceae. Flora of Australia 57: 535-552
2. Aptroot, A., & Lücking, R. (2016). A revisionary synopsis of the Trypetheliaceae (Ascomycota: Trypetheliales). Lichenologist 48: 763-982
3. Aptroot, A., Saipunkaew, W., Sipman, H. J. M., Sparrius, L. B., & Wolseley, P. A. (2007). New lichens from Thailand, mainly microlichens from Chiang Mai. Fungal Diversity 24: 75-134
4. Aptroot, A., Lücking, R., Sipman, H. J. M., Umaña, L., & Chaves, J. L. (2008). Pyrenocarpous lichens with bitunicate asci. A first aßeßment of the lichen biodiversity inventory in Costa Rica. Bibliotheca Lichenologica 97: 1-162
5. Awasthi, D. D. (1991). A key to the microlichens of India, Nepal, and Sri Lanka. Bibliotheca Lichenologica 40: 1-340
6. Awasthi, D. D. (2000). Lichenology in Indian Subcontinent: A Supplement to 'A Handbook of Lichens'. Dehra Dun: Bishen Singh Mahendra Pal Singh
7. Córdova-Chávez, O., Aptroot, A., Castillo-Camposa, G., Cáceres, M. E. S., & Pérez-Pérez, R. E. (2014). Three new lichen species from cloud forest in Veracruz, Mexico. Cryptogamie, Mycologie 35: 157-162
8. Cubero, O. F., & Crespo, A. (2002). Isolation of nucleic acids from lichens. In Protocols in Lichenology. Culturing, Biochemistry, Ecophysiology, and Use in Biomonitoring (I. Kranner, R. P. Beckett, & A. K. Varma, eds): 381-392. Berlin: Springer
9. Culberson, C. F. (1972). Improved conditions, and new data for the identification of lichen products by a standardized thin-layer chromatographic method. Journal of Chromatography 72: 113-125
10. Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2012). jModelTest 2: more models, new heuristics, and parallel computing. Nature Methods 9: 772
11. Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy, and high throughput. Nucleic Acids Research 32: 1792-1797
12. Gardes, M., & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes -application to the identification of mycorrhizae, and rusts. Molecular Ecology 2: 113-118
13. Harris, R. C. (1984) the family Trypetheliaceae (Loculoascomycetes: lichenized Melanommatales) in Amazonian Brazil. Supplement Acta Amazonica 14: 55-80
14. Harris, R. C. (1995). More Florida Lichens. Including the 10¢ Tour of the Pyrenolichens. Bronx, New York: Published by the author
15. Hyde, K. D., Liu, J. K., Binder, M., Aryawansha, H., Boehm, E., Boonmee, S., Braun, U., Chomnunti, P., Crous, P. W., Dai, D., et al. (2013). Families of Dothideomycetes. Fungal Diversity 63: 1-313
16. Kirk, P.M., Cannon, P. F., Minter, D. W., & Stalpers, J. A. (2008). Dictionary of the Fungi. 10th edn. Wallingford: CAB International
17. Lima, E.L., Maia, L. C., Aptroot, A., & Cáceres, M.E. S. (2013). New lichen species from Vale do Catimbau, Pernambuco, Brazil. Bryologist 116: 327-329
18. Lücking, R., Seavey, F., Common, R. S., Beeching, S. Q., Breuß, O., Buck, W. R., Crane, L., Hodges, M., Hodkinson, B. P., Lay, E., et al. (2011) the lichens of Fakahatchee Strand Preserve State Park, Florida: proceedings from the 18th Tuckerman Workshop. Bulletin of the Florida Museum of Natural History 49: 127-186
19. Lumbsch, H. T. (2002). Analysis of phenolic products in lichens for identification, and taxonomy. In Protocols in Lichenology. Culturing, Biochemistry, Ecophysiology, and Use in Biomonitoring (I. Kranner, R. P. Beckett, & A. K. Varma, eds): 281-295. Berlin: Springer
20. Makhija, U., & Patwardhan, P. G. (1988). Materials for a lichen flora of the Andaman Islands -IV. Pyrenocarpous lichens. Mycotaxon 31: 467-481
21. Makhija, U., & Patwardhan, P. G. (1989) the lichen family Asterotheliaceae sensu Zahlbrucker in India. Biovigyanam 15: 61-89
22. Malme, G. O. A. (1924). Die Flechten der ersten Regnellschen Expedition. Astrotheliaceae, Paratheliaceae und Trypetheliaceae. Arkiv før Botanik 19 (1): 1-34
23. Matheny, P. B., Liu, Y. J., Ammirati, J. F., & Hall, B. D. (2002). Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales). American Journal of Botany 89: 688-698
24. Ronquist, F., & Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574
25. Sangvichien, E., Hawksworth, D. L., & Whalley, A. J. S. (2011). Ascospore discharge, germination, and culture of fungal partners of tropical lichens, including the use of a novel culture technique. IMA Fungus 2: 143-153
26. Singh, K. P., & Sinha, G. P. (2010). Indian Lichens: An Annotated Checklist. Kolkata: Botanical Survey of India, Ministry of Environment, and Forests
27. Stamatakis, A., Hoover, P., & Rougemont, J. (2008). A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57: 758-771
28. Swofford, D. L. (1999). PAUP: Phylogenetic Analysis Using Parsimony (and Other Methods) Version 4.0b10. Sunderland, Maßachusetts: Sinauer Aßociates
29. Tamura, K., Stecher, G., Peterson, D., Filipski, A., & Kumar, S. (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology, and Evolution 30: 2725-2729
30. Vilgalys, R., & Hester, M. (1990). Rapid genetic identification, and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239-4246
31. Vongshewarat, K. (2000). Study on taxonomy, and ecology of the lichen family Trypetheliaceae in Thailand. M. Sc. thesis, Ramkhamhaeng University
32. Weerakoon, G., & Aptroot, A. (2014). Over 200 new lichen records from Sri Lanka, with three new species to science. Cryptogamie, Mycologie 35: 51-62
33. White, T. J., Bruns, T. D., Lee, S. B., & Taylor, J. W. (1990). Amplification, and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods, and Applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky, & T. J. White, eds): 315-322. San Diego: Academic Preß
34. Zhou, S., & Stanosz, G. R. (2001). Primers for amplification of mt ßU rDNA, and a phylogenetic study of Botryosphaeria, and aßociated anamorphic fungi. Mycological Research 105: 1033-1044
35. Zoller, S., Scheidegger, C., & Sperisen, C. (1999). PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichen-forming ascomycetes. Lichenologist 31: 511-516