Genome sequence of Porphyromonas gingivalis strain HG66 (DSM 28984)

Genome Announcements

Volumn 2, Issue 5, 2014, Pages

  Siddiqui, Huma ^a   Yoder Himes, Deborah Ruth ^b   Mizgalska, Danuta ^c   Nguyen, Ky Anh ^d,e   Potempa, Jan ^c,f   Olsen, Ingar ^a  

^a UNIVERSITY OF OSLO   (Norway)

^b UNIVERSITY OF LOUISVILLE   (United States)

^c JAGIELLONIAN UNIVERSITY   (Poland)

^d Westmead Centre for Oral Health   (Australia)

^e UNIVERSITY OF SYDNEY   (Australia)

^f UNIVERSITY OF LOUISVILLE SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85003816282     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00947-14     Document Type: Article

References (12)

1. Socransky SS, Haffajee AD, Cugini MA, Smith C, Kent RL, Jr. 1998. Microbial complexes in subgingival plaque. J. Clin. Periodontol. 25: 134-144. http://dx.doi.org/10.1111/j.1600-051X.1998.tb02419.x.
2. Demmer RT, Desvarieux M. 2006. Periodontal infections and cardiovascular disease: the heart of the matter. J. Am. Dent. Assoc. 137:14S-20S. http://dx.doi.org/10.14219/jada.archive.2006.0402.
3. Lundberg K, Wegner N, Yucel-Lindberg T, Venables PJ. 2010. Periodontitis in RA-the citrullinated enolase connection. Nat. Rev. Rheumatol. 6:727-730. http://dx.doi.org/10.1038/nrrheum.2010.139.
4. Dorn BR, Burks JN, Seifert KN, Progulske-Fox A. 2000. Invasion of endothelial and epithelial cells by strains of Porphyromonas gingivalis. FEMS Microbiol. Lett. 187:139-144. http://dx.doi.org/10.1111/j.1574-6968.2000.tb09150.x.
5. Li N, Collyer CA. 2011. Gingipains from Porphyromonas gingivalis-complex domain structures confer diverse functions. Eur. J Microbiol. Immunol. 1:41-58. http://dx.doi.org/10.1556/EuJMI.1.2011.1.7.
6. Potempa J, Nguyen KA. 2007. Purification and characterization of gingipains. Curr. Protoc. Protein Sci. 49:21.20.1-21.20.27. http://dx.doi.org/10.1002/0471140864.ps2120s49.
7. Naito M, Hirakawa H, Yamashita A, Ohara N, Shoji M, Yukitake H, Nakayama K, Toh H, Yoshimura F, Kuhara S, Hattori M, Hayashi T, Nakayama K. 2008. Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis. DNA Res. 15:215-225. http://dx.doi.org/10.1093/dnares/dsn013.
8. Nelson KE, Fleischmann RD, DeBoy RT, Paulsen IT, Fouts DE, Eisen JA, Daugherty SC, Dodson RJ, Durkin AS, Gwinn M, Haft DH, Kolonay JF, Nelson WC, Mason T, Tallon L, Gray J, Granger D, Tettelin H, Dong H, Galvin JL, Duncan MJ, Dewhirst FE, Fraser CM. 2003 Complete genome sequence of the oral pathogenic bacterium Porphyromonas gingivalis strain W83. J. Bacteriol. 185:5591-5601. (Erratum, 186:593, 2004.) http://dx.doi.org/10.1128/JB.185.18.5591-5601.2003.
9. Watanabe T, Maruyama F, Nozawa T, Aoki A, Okano S, Shibata Y, Oshima K, Kurokawa K, Hattori M, Nakagawa I, Abiko Y. 2011. Complete genome sequence of the bacterium Porphyromonas gingivalis TDC60, which causes periodontal disease. J. Bacteriol. 193:4259-4260. http://dx.doi.org/10.1128/JB.05269-11.
10. Liu D, Zhou Y, Naito M, Yumoto H, Li Q, Miyake Y, Liang J, Shu R. 2014 Draft genome sequence of Porphyromonas gingivalis strain SJD2, isolated from the periodontal pocket of a patient with periodontitis in China. Genome Announc. 2(1):e01091-13. http://dx.doi.org/10.1128/genomeA.01091-13.
11. Lagesen K, Hallin PF, Rødland EA, Stærfeldt HH, Rognes T, Ussery DW. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108. http://dx.doi.org/10.1093/nar/gkm160.
12. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. The RAST server: Rapid Annotations using Subsystems Technology. BMC Genomics 9:75. http://dx.doi.org/10.1186/1471-2164-9-75.