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Volumn 20, Issue 16, 2015, Pages

A multi-country Salmonella Enteritidis phage type 14b outbreak associated with eggs from a German producer: ‘Near real-time’ application of whole genome sequencing and food chain investigations, United Kingdom, may to september 2014

(55)  Inns, Thomas c   Lane, C a   Peters, T a   Dallman, T a   Chatt, C a   McFarland, N a   Crook, P a   Bishop, T b   Edge, J b   Hawker, J a   Elson, R a   Neal, K a   Adak, G K a   Cleary, P a   Adak, Bob c   Adams, Natalie c   Anderson, Debbie c   Ashton, Philip c   Balasegaram, Sooria c   Barnett, Maree c   more..

c NONE

Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AGED; ARTICLE; CATERING SERVICE; CHILD; EGG; EPIDEMIC; FEMALE; FOOD CHAIN; FOOD CONTAMINATION; GENE SEQUENCE; GERMANY; HUMAN; INFANT; INFECTION CONTROL; MAJOR CLINICAL STUDY; MALE; NEWBORN; NONHUMAN; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR ENTERITIDIS; SALMONELLOSIS; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; UNITED KINGDOM; WHOLE GENOME SEQUENCING; AUSTRIA; BACTERIAL GENOME; BACTERIOPHAGE TYPING; FOOD CONTROL; FRANCE; GENETICS; ISOLATION AND PURIFICATION; MIDDLE AGED; MULTILOCUS SEQUENCE TYPING; POLYMERASE CHAIN REACTION; PROCEDURES; SALMONELLA ENTERICA SEROVAR ENTERITIDIS; SALMONELLA FOOD POISONING; SALMONELLA PHAGE; VARIABLE NUMBER OF TANDEM REPEAT; VIROLOGY; YOUNG ADULT;

EID: 85000399636     PISSN: 1025496X     EISSN: 15607917     Source Type: Journal    
DOI: 10.2807/1560-7917.ES2015.20.16.21098     Document Type: Article
Times cited : (72)

References (16)
  • 1
    • 84902762878 scopus 로고    scopus 로고
    • Salmonella enterica serovar Enteritidis, England and Wales, 1945-2011
    • PMID: 24960614
    • Lane CR, LeBaigue S, Esan OB, Awofisyo AA, Adams NL, Fisher IST, et al. Salmonella enterica serovar Enteritidis, England and Wales, 1945-2011. Emerg Infect Dis. 2014; 20(7): 1097-104. http://dx. doi. org/10. 3201/eid2007. 121850 PMID: 24960614
    • (2014) Emerg Infect Dis , vol.20 , Issue.7 , pp. 1097-1104
    • Lane, C.R.1    LeBaigue, S.2    Esan, O.B.3    Awofisyo, A.A.4    Adams, N.L.5    Fisher, I.S.T.6
  • 2
    • 84900993023 scopus 로고    scopus 로고
    • Controlling Salmonella along the food chain in the European Union-progress over the last ten years
    • PMID: 24852953
    • Hugas M, Beloeil P. Controlling Salmonella along the food chain in the European Union-progress over the last ten years. Euro Surveill. 2014; 19(19): 20804. http://dx. doi. org/10. 2807/1560-7917. ES2014. 19. 19. 20804 PMID: 24852953
    • (2014) Euro Surveill , vol.19 , Issue.19
    • Hugas, M.1    Beloeil, P.2
  • 3
    • 19144364603 scopus 로고    scopus 로고
    • National case-control study of Salmonella Enteritidis Phage Type 14b infection in England and Wales implicates eggs used in the catering trade
    • pii=2388
    • O'Brien S, Gillespie IA, Charlett A, Adak GK, Threlfall EJ, Ward L. National case-control study of Salmonella Enteritidis Phage Type 14b infection in England and Wales implicates eggs used in the catering trade. Euro Surveill. 2004; 8(8): pii=2388.
    • (2004) Euro Surveill , vol.8 , Issue.8
    • O'Brien, S.1    Gillespie, I.A.2    Charlett, A.3    Adak, G.K.4    Threlfall, E.J.5    Ward, L.6
  • 4
    • 79955446353 scopus 로고    scopus 로고
    • National outbreak of Salmonella Enteritidis phage type 14b in England, September to December 2009: Case-control study
    • PMID: 21507321
    • Janmohamed K, Zenner D, Little C, Lane C, Wain J, Charlett A, et al. National outbreak of Salmonella Enteritidis phage type 14b in England, September to December 2009: case-control study. Euro Surveill. 2011; 16(15): 19840. PMID: 21507321
    • (2011) Euro Surveill , vol.16 , Issue.15
    • Janmohamed, K.1    Zenner, D.2    Little, C.3    Lane, C.4    Wain, J.5    Charlett, A.6
  • 5
    • 84896454183 scopus 로고    scopus 로고
    • National outbreaks of Salmonella infection in the UK, 2000-2011
    • PMID: 23721866
    • Harker KS, Lane C, Gormley FJ, Adak GK. National outbreaks of Salmonella infection in the UK, 2000-2011. Epidemiol Infect. 2014; 142(3): 601-7. http://dx. doi. org/10. 1017/S0950268813001210 PMID: 23721866
    • (2014) Epidemiol Infect , vol.142 , Issue.3 , pp. 601-607
    • Harker, K.S.1    Lane, C.2    Gormley, F.J.3    Adak, G.K.4
  • 6
    • 85181426145 scopus 로고    scopus 로고
    • European Centre for Disease Prevention and Control (ECDC). European Food Safety Authority (EFSA). Multi-country outbreak of Salmonella Enteritidis infections associated with consumption of eggs from Germany-25 August 2014. Stockholm and Parma: ECDC/EFSA; 2014.
  • 7
    • 85181435241 scopus 로고    scopus 로고
    • Heymann DL, editor. Control of Communicable Diseases Manual. 20th ed. Washington DC: American Public Health Association; 2014.
  • 8
    • 0023424976 scopus 로고
    • A phage-typing scheme for Salmonella enteritidis
    • PMID: 3315705
    • Ward LR, de Sa JDH, Rowe B. A phage-typing scheme for Salmonella enteritidis. Epidemiol Infect. 1987; 99(2): 291-4. http://dx. doi. org/10. 1017/S0950268800067765 PMID: 3315705
    • (1987) Epidemiol Infect , vol.99 , Issue.2 , pp. 291-294
    • Ward, L.R.1    de Sa, J.D.H.2    Rowe, B.3
  • 9
    • 80052054109 scopus 로고    scopus 로고
    • Standardisation of multilocus variable-number tandem-repeat analysis (MLVA) for subtyping of Salmonella enterica serovar Enteritidis
    • PMID: 21871223
    • Hopkins KL, Peters TM, de Pinna E, Wain J. Standardisation of multilocus variable-number tandem-repeat analysis (MLVA) for subtyping of Salmonella enterica serovar Enteritidis. Euro Surveill. 2011; 16(32): 11. PMID: 21871223
    • (2011) Euro Surveill , vol.16 , Issue.32 , pp. 11
    • Hopkins, K.L.1    Peters, T.M.2    de Pinna, E.3    Wain, J.4
  • 10
    • 77949587649 scopus 로고    scopus 로고
    • Fast and accurate long-read alignment with Burrows-Wheeler transform
    • PMID: 20080505
    • Li H, Durbin R. Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics. 2010; 26(5): 589-95. http://dx. doi. org/10. 1093/bioinformatics/btp698 PMID: 20080505
    • (2010) Bioinformatics , vol.26 , Issue.5 , pp. 589-595
    • Li, H.1    Durbin, R.2
  • 11
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
    • PMID: 20644199
    • McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 2010; 20(9): 1297-303. http://dx. doi. org/10. 1101/gr. 107524. 110 PMID: 20644199
    • (2010) Genome Res , vol.20 , Issue.9 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5    Kernytsky, A.6
  • 12
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
    • PMID: 24451623
    • Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 2014; 30(9): 1312-3. http://dx. doi. org/10. 1093/bioinformatics/btu033 PMID: 24451623
    • (2014) Bioinformatics , vol.30 , Issue.9 , pp. 1312-1313
    • Stamatakis, A.1
  • 13
    • 85181420321 scopus 로고    scopus 로고
    • Food Standards Agency (FSA). FSA advice to caterers on the safe handling of eggs [Accessed 10 Oct 2014]. Available from: http://www. food. gov. uk/news-updates/news/2014/12842/fsa-advice-to-caterers-on-the-safe-handling-of-eggs
  • 14
    • 79952432498 scopus 로고    scopus 로고
    • Identification of a salmonellosis outbreak by means of molecular sequencing
    • PMID: 21345093
    • Lienau EK, Strain E, Wang C, Zheng J, Ottesen AR, Keys CE, et al. Identification of a salmonellosis outbreak by means of molecular sequencing. N Engl J Med. 2011; 364(10): 981-2. http://dx. doi. org/10. 1056/NEJMc1100443 PMID: 21345093
    • (2011) N Engl J Med , vol.364 , Issue.10 , pp. 981-982
    • Lienau, E.K.1    Strain, E.2    Wang, C.3    Zheng, J.4    Ottesen, A.R.5    Keys, C.E.6
  • 15
    • 84905223467 scopus 로고    scopus 로고
    • Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis
    • PMID: 25062035
    • den Bakker HC, Allard MW, Bopp D, Brown EW, Fontana J, Iqbal Z, et al. Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis. Emerg Infect Dis. 2014; 20(8): 1306-14. http://dx. doi. org/10. 3201/eid2008. 131399 PMID: 25062035
    • (2014) Emerg Infect Dis , vol.20 , Issue.8 , pp. 1306-1314
    • den Bakker, H.C.1    Allard, M.W.2    Bopp, D.3    Brown, E.W.4    Fontana, J.5    Iqbal, Z.6
  • 16
    • 84906791480 scopus 로고    scopus 로고
    • A multi-country outbreak of Salmonella Newport gastroenteritis in Europe associated with watermelon from Brazil, confirmed by whole genome sequencing: October 2011 to January 2012
    • PMID: 25138971
    • Byrne L, Fisher I, Peters T, Mather A, Thomson N, Rosner B, et al.; International Outbreak Control Team. A multi-country outbreak of Salmonella Newport gastroenteritis in Europe associated with watermelon from Brazil, confirmed by whole genome sequencing: October 2011 to January 2012. Euro Surveill. 2014; 19(31): 6-13. http://dx. doi. org/10. 2807/1560-7917. ES2014. 19. 31. 20866 PMID: 25138971
    • (2014) Euro Surveill , vol.19 , Issue.31 , pp. 6-13
    • Byrne, L.1    Fisher, I.2    Peters, T.3    Mather, A.4    Thomson, N.5    Rosner, B.6


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