메뉴 건너뛰기




Volumn 1, Issue 6, 2013, Pages

Draft genome sequence of Pseudozyma brasiliensis sp. nov. strain GHG001, a high producer of endo-1,4-xylanase isolated from an insect pest of sugarcane

Author keywords

[No Author keywords available]

Indexed keywords


EID: 84999788874     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00920-13     Document Type: Article
Times cited : (10)

References (15)
  • 1
    • 84886587760 scopus 로고    scopus 로고
    • Pseudozyma vetiver sp. nov., a novel anamorphic ustilaginomycetous yeast species iso-lated from the phylloplane in Thailand
    • Chamnanpa T, Limtong P, Srisuk N, Limtong S. 2013. Pseudozyma vetiver sp. nov., a novel anamorphic ustilaginomycetous yeast species iso-lated from the phylloplane in Thailand. Antonie Van Leeuwenhoek 104: 637-644.
    • (2013) Antonie Van Leeuwenhoek , vol.104 , pp. 637-644
    • Chamnanpa, T.1    Limtong, P.2    Srisuk, N.3    Limtong, S.4
  • 2
    • 84857646538 scopus 로고    scopus 로고
    • GH11 xylanases: structure/function/properties relationships and applications
    • Paës G, Berrin JG, Beaugrand J. 2012. GH11 xylanases: structure/function/properties relationships and applications. Biotechnol. Adv. 30: 564-592.
    • (2012) Biotechnol. Adv , vol.30 , pp. 564-592
    • Paës, G.1    Berrin, J.G.2    Beaugrand, J.3
  • 4
    • 79952592810 scopus 로고    scopus 로고
    • A fast, lock-free approach for efficient parallel counting of occurrences of k-mers
    • Marçais G, Kingsford C. 2011. A fast, lock-free approach for efficient parallel counting of occurrences of k-mers. Bioinformatics 27:764-770.
    • (2011) Bioinformatics , vol.27 , pp. 764-770
    • Marçais, G.1    Kingsford, C.2
  • 5
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 6
    • 77956967295 scopus 로고    scopus 로고
    • Using the Velvet de novo assembler for short-read sequencing technologies
    • Zerbino DR. 2010. Using the Velvet de novo assembler for short-read sequencing technologies. Curr. Protoc. Bioinformatics 31:11.5.1-11.5.12. doi:10.1002/0471250953.bi1105s31.
    • (2010) Curr. Protoc. Bioinformatics , vol.31 , pp. 11.5.1-11.5.12
    • Zerbino, D.R.1
  • 8
    • 84997831587 scopus 로고    scopus 로고
    • Draft genome sequence of the basidiomycetous yeast-like fungus Pseudozyma hubeiensis SY62, which produces an abundant amount of the biosurfactant mannosylerythritol lipids
    • Konishi M, Hatada Y, Horiuchi J. 2013. Draft genome sequence of the basidiomycetous yeast-like fungus Pseudozyma hubeiensis SY62, which produces an abundant amount of the biosurfactant mannosylerythritol lipids. Genome Announc. 1(4):e00409-13. doi:10.1128/genomeA.00409-13.
    • (2013) Genome Announc , vol.1 , Issue.4
    • Konishi, M.1    Hatada, Y.2    Horiuchi, J.3
  • 9
    • 84995904548 scopus 로고    scopus 로고
    • Genome sequence of the basidiomycetous yeast Pseudozyma antarctica T-34, a producer of the glycolipid biosurfactants mannosylerythritol lipids
    • Morita T, Koike H, Koyama Y, Hagiwara H, Ito E, Fukuoka T, Imura T, Machida M, Kitamoto D. 2013. Genome sequence of the basidiomycetous yeast Pseudozyma antarctica T-34, a producer of the glycolipid biosurfactants mannosylerythritol lipids. Genome Announc. 1(2):e00064-13. doi:10.1128/genomeA.00064-13.
    • (2013) Genome Announc , vol.1 , Issue.2
    • Morita, T.1    Koike, H.2    Koyama, Y.3    Hagiwara, H.4    Ito, E.5    Fukuoka, T.6    Imura, T.7    Machida, M.8    Kitamoto, D.9
  • 10
    • 34249848751 scopus 로고    scopus 로고
    • CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
    • Parra G, Bradnam K, Korf I. 2007. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 23:1061-1067.
    • (2007) Bioinformatics , vol.23 , pp. 1061-1067
    • Parra, G.1    Bradnam, K.2    Korf, I.3
  • 12
    • 33645161645 scopus 로고    scopus 로고
    • Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
    • Stanke M, Schöffmann O, Morgenstern B, Waack S. 2006. Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources. BMC Bioinformatics 7:62. doi:10.1186/1471-2105-7-62.
    • (2006) BMC Bioinformatics , vol.7 , pp. 62
    • Stanke, M.1    Schöffmann, O.2    Morgenstern, B.3    Waack, S.4
  • 15
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
    • Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
    • (1997) Nucleic Acids Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.