메뉴 건너뛰기




Volumn 36, Issue , 2017, Pages 1-8

Applying CRISPR/Cas for genome engineering in plants: the best is yet to come

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; CRISPR CAS SYSTEM; DNA END JOINING REPAIR; GENE INACTIVATION; GENETIC ENGINEERING; PLANT GENOME; TRENDS;

EID: 84999711685     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pbi.2016.11.011     Document Type: Review
Times cited : (239)

References (79)
  • 1
    • 0029946668 scopus 로고    scopus 로고
    • Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination
    • 1 Puchta, H., Dujon, B., Hohn, B., Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination. Proc Natl Acad Sci U S A 93 (1996), 5055–5060.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 5055-5060
    • Puchta, H.1    Dujon, B.2    Hohn, B.3
  • 2
    • 0032531757 scopus 로고    scopus 로고
    • Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells
    • 2 Salomon, S., Puchta, H., Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells. EMBO J 17 (1998), 6086–6095, 10.1093/emboj/17.20.6086.
    • (1998) EMBO J , vol.17 , pp. 6086-6095
    • Salomon, S.1    Puchta, H.2
  • 3
    • 11444267813 scopus 로고    scopus 로고
    • The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution
    • 3 Puchta, H., The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution. J Exp Bot 56 (2005), 1–14, 10.1093/jxb/eri025.
    • (2005) J Exp Bot , vol.56 , pp. 1-14
    • Puchta, H.1
  • 4
    • 0034675997 scopus 로고    scopus 로고
    • Species-specific double-strand break repair and genome evolution in plants
    • 4 Kirik, A., Salomon, S., Puchta, H., Species-specific double-strand break repair and genome evolution in plants. EMBO J 19 (2000), 5562–5566, 10.1093/emboj/19.20.5562.
    • (2000) EMBO J , vol.19 , pp. 5562-5566
    • Kirik, A.1    Salomon, S.2    Puchta, H.3
  • 5
    • 0036016441 scopus 로고    scopus 로고
    • Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome
    • 5 Siebert, R., Puchta, H., Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome. Plant Cell 14 (2002), 1121–1131.
    • (2002) Plant Cell , vol.14 , pp. 1121-1131
    • Siebert, R.1    Puchta, H.2
  • 6
    • 84960832490 scopus 로고    scopus 로고
    • Origins of programmable nucleases for genome engineering
    • 6 Chandrasegaran, S., Carroll, D., Origins of programmable nucleases for genome engineering. J Mol Biol 428:Pt B (2016), 963–989, 10.1016/j.jmb.2015.10.014.
    • (2016) J Mol Biol , vol.428 , pp. 963-989
    • Chandrasegaran, S.1    Carroll, D.2
  • 7
    • 84874627868 scopus 로고    scopus 로고
    • Plant genome engineering with sequence-specific nucleases
    • 7 Voytas, D.F., Plant genome engineering with sequence-specific nucleases. Annu Rev Plant Biol 64 (2013), 327–350, 10.1146/annurev-arplant-042811-105552.
    • (2013) Annu Rev Plant Biol , vol.64 , pp. 327-350
    • Voytas, D.F.1
  • 8
    • 84901386271 scopus 로고    scopus 로고
    • Synthetic nucleases for genome engineering in plants: prospects for a bright future
    • 8 Puchta, H., Fauser, F., Synthetic nucleases for genome engineering in plants: prospects for a bright future. Plant J Cell Mol Biol 78 (2014), 727–741, 10.1111/tpj.12338.
    • (2014) Plant J Cell Mol Biol , vol.78 , pp. 727-741
    • Puchta, H.1    Fauser, F.2
  • 9
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Till now the most important article of molecular biology in the 21st century.
    • 9•• Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J.A., Charpentier, E., A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science (New York, NY) 337 (2012), 816–821, 10.1126/science.1225829 Till now the most important article of molecular biology in the 21st century.
    • (2012) Science (New York, NY) , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 11
    • 84883828590 scopus 로고    scopus 로고
    • Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease
    • 11 Nekrasov, V., Staskawicz, B., Weigel, D., Jones, J.D.G., Kamoun, S., Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nat Biotechnol 31 (2013), 691–693, 10.1038/nbt.2655.
    • (2013) Nat Biotechnol , vol.31 , pp. 691-693
    • Nekrasov, V.1    Staskawicz, B.2    Weigel, D.3    Jones, J.D.G.4    Kamoun, S.5
  • 12
    • 84883785822 scopus 로고    scopus 로고
    • Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9
    • 12 Li, J.-F., Norville, J.E., Aach, J., McCormack, M., Zhang, D., Bush, J., Church, G.M., Sheen, J., Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9. Nat Biotechnol 31 (2013), 688–691, 10.1038/nbt.2654.
    • (2013) Nat Biotechnol , vol.31 , pp. 688-691
    • Li, J.-F.1    Norville, J.E.2    Aach, J.3    McCormack, M.4    Zhang, D.5    Bush, J.6    Church, G.M.7    Sheen, J.8
  • 13
    • 84921934205 scopus 로고    scopus 로고
    • Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew
    • The first impressive example of the power of genome engineering for breeding: the production of wheat that is resistant to powdery mildew.
    • 13•• Wang, Y., Cheng, X., Shan, Q., Zhang, Y., Liu, J., Gao, C., Qiu, J.-L., Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew. Nat Biotechnol 32 (2014), 947–951, 10.1038/nbt.2969 The first impressive example of the power of genome engineering for breeding: the production of wheat that is resistant to powdery mildew.
    • (2014) Nat Biotechnol , vol.32 , pp. 947-951
    • Wang, Y.1    Cheng, X.2    Shan, Q.3    Zhang, Y.4    Liu, J.5    Gao, C.6    Qiu, J.-L.7
  • 14
    • 84975179107 scopus 로고    scopus 로고
    • Targeted gene manipulation in plants using the CRISPR/Cas technology
    • Yi chuan xue bao
    • 14 Zhang, D., Li, Z., Li, J.-F., Targeted gene manipulation in plants using the CRISPR/Cas technology. J Genet Genomics (Trans.) Yi chuan xue bao, 43, 2016, 251–262, 10.1016/j.jgg.2016.03.001.
    • (2016) J Genet Genomics , vol.43 , pp. 251-262
    • Zhang, D.1    Li, Z.2    Li, J.-F.3
  • 15
    • 84964999936 scopus 로고    scopus 로고
    • Applications of CRISPR/Cas9 technology for targeted mutagenesis, gene replacement and stacking of genes in higher plants
    • 15 Luo, M., Gilbert, B., Ayliffe, M., Applications of CRISPR/Cas9 technology for targeted mutagenesis, gene replacement and stacking of genes in higher plants. Plant Cell Rep 35 (2016), 1439–1450, 10.1007/s00299-016-1989-8.
    • (2016) Plant Cell Rep , vol.35 , pp. 1439-1450
    • Luo, M.1    Gilbert, B.2    Ayliffe, M.3
  • 16
    • 85009143841 scopus 로고    scopus 로고
    • CRISPR/Cas9 platforms for genome editing in plants: developments and applications
    • 16 Ma, X., Zhu, Q., Chen, Y., Liu, Y.-G., CRISPR/Cas9 platforms for genome editing in plants: developments and applications. Mol Plant 9 (2016), 961–974, 10.1016/j.molp.2016.04.009.
    • (2016) Mol Plant , vol.9 , pp. 961-974
    • Ma, X.1    Zhu, Q.2    Chen, Y.3    Liu, Y.-G.4
  • 17
    • 84957837698 scopus 로고    scopus 로고
    • Revolutionizing plant biology: multiple ways of genome engineering by CRISPR/Cas
    • 17 Schiml, S., Puchta, H., Revolutionizing plant biology: multiple ways of genome engineering by CRISPR/Cas. Plant Methods, 12, 2016, 8, 10.1186/s13007-016-0103-0.
    • (2016) Plant Methods , vol.12 , pp. 8
    • Schiml, S.1    Puchta, H.2
  • 18
    • 84958241188 scopus 로고    scopus 로고
    • Advances and perspectives on the use of CRISPR/Cas9 systems in plant genomics research
    • 18 Liu, D., Hu, R., Palla, K.J., Tuskan, G.A., Yang, X., Advances and perspectives on the use of CRISPR/Cas9 systems in plant genomics research. Curr Opin Plant Biol 30 (2016), 70–77, 10.1016/j.pbi.2016.01.007.
    • (2016) Curr Opin Plant Biol , vol.30 , pp. 70-77
    • Liu, D.1    Hu, R.2    Palla, K.J.3    Tuskan, G.A.4    Yang, X.5
  • 19
    • 84904068340 scopus 로고    scopus 로고
    • Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana
    • 19 Fauser, F., Schiml, S., Puchta, H., Both CRISPR/Cas-based nucleases and nickases can be used efficiently for genome engineering in Arabidopsis thaliana. Plant J Cell Mol Biol 79 (2014), 348–359, 10.1111/tpj.12554.
    • (2014) Plant J Cell Mol Biol , vol.79 , pp. 348-359
    • Fauser, F.1    Schiml, S.2    Puchta, H.3
  • 20
    • 84965013564 scopus 로고    scopus 로고
    • Regulatory hurdles for genome editing: process- vs. product-based approaches in different regulatory contexts
    • 20 Sprink, T., Eriksson, D., Schiemann, J., Hartung, F., Regulatory hurdles for genome editing: process- vs. product-based approaches in different regulatory contexts. Plant Cell Rep 35 (2016), 1493–1506, 10.1007/s00299-016-1990-2.
    • (2016) Plant Cell Rep , vol.35 , pp. 1493-1506
    • Sprink, T.1    Eriksson, D.2    Schiemann, J.3    Hartung, F.4
  • 21
    • 78249245697 scopus 로고    scopus 로고
    • Nontransgenic genome modification in plant cells
    • First demonstration that viral synthetic nucleases can be delivered by viral RNA to produce plant mutants without recombinant DNA.
    • 21• Marton, I., Zuker, A., Shklarman, E., Zeevi, V., Tovkach, A., Roffe, S., Ovadis, M., Tzfira, T., Vainstein, A., Nontransgenic genome modification in plant cells. Plant Physiol 154 (2010), 1079–1087, 10.1104/pp.110.164806 First demonstration that viral synthetic nucleases can be delivered by viral RNA to produce plant mutants without recombinant DNA.
    • (2010) Plant Physiol , vol.154 , pp. 1079-1087
    • Marton, I.1    Zuker, A.2    Shklarman, E.3    Zeevi, V.4    Tovkach, A.5    Roffe, S.6    Ovadis, M.7    Tzfira, T.8    Vainstein, A.9
  • 24
    • 84969834753 scopus 로고    scopus 로고
    • Targeted mutagenesis in plant cells through transformation of sequence-specific nuclease mRNA
    • 24 Stoddard, T.J., Clasen, B.M., Baltes, N.J., Demorest, Z.L., Voytas, D.F., Zhang, F., Luo, S., Targeted mutagenesis in plant cells through transformation of sequence-specific nuclease mRNA. PLOS ONE, 11, 2016, e0154634, 10.1371/journal.pone.0154634.
    • (2016) PLOS ONE , vol.11 , pp. e0154634
    • Stoddard, T.J.1    Clasen, B.M.2    Baltes, N.J.3    Demorest, Z.L.4    Voytas, D.F.5    Zhang, F.6    Luo, S.7
  • 25
    • 84947255513 scopus 로고    scopus 로고
    • DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins
    • First demonstration that Cas9 can be applied as protein DNA complex for mutation induction in plants.
    • 25• Woo, J.W., Kim, J., Kwon, S.I., Corvalan, C., Cho, S.W., Kim, H., Kim, S.-G., Kim, S.-T., Choe, S., Kim, J.-S., DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins. Nat Biotechnol 33 (2015), 1162–1164, 10.1038/nbt.3389 First demonstration that Cas9 can be applied as protein DNA complex for mutation induction in plants.
    • (2015) Nat Biotechnol , vol.33 , pp. 1162-1164
    • Woo, J.W.1    Kim, J.2    Kwon, S.I.3    Corvalan, C.4    Cho, S.W.5    Kim, H.6    Kim, S.-G.7    Kim, S.-T.8    Choe, S.9    Kim, J.-S.10
  • 26
    • 84922664019 scopus 로고    scopus 로고
    • Multigene knockout utilizing off-target mutations of the CRISPR/Cas9 system in rice
    • 26 Endo, M., Mikami, M., Toki, S., Multigene knockout utilizing off-target mutations of the CRISPR/Cas9 system in rice. Plant Cell Physiol 56 (2015), 41–47, 10.1093/pcp/pcu154.
    • (2015) Plant Cell Physiol , vol.56 , pp. 41-47
    • Endo, M.1    Mikami, M.2    Toki, S.3
  • 27
    • 84896924524 scopus 로고    scopus 로고
    • Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis
    • 27 Feng, Z., Mao, Y., Xu, N., Zhang, B., Wei, P., Yang, D.-L., Wang, Z., Zhang, Z., Zheng, R., Yang, L., et al. Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis. Proc Natl Acad Sci U S A 111 (2014), 4632–4637, 10.1073/pnas.1400822111.
    • (2014) Proc Natl Acad Sci U S A , vol.111 , pp. 4632-4637
    • Feng, Z.1    Mao, Y.2    Xu, N.3    Zhang, B.4    Wei, P.5    Yang, D.-L.6    Wang, Z.7    Zhang, Z.8    Zheng, R.9    Yang, L.10
  • 28
    • 84971507156 scopus 로고    scopus 로고
    • Precision targeted mutagenesis via Cas9 paired nickases in rice
    • 28 Mikami, M., Toki, S., Endo, M., Precision targeted mutagenesis via Cas9 paired nickases in rice. Plant Cell Physiol 57 (2016), 1058–1068, 10.1093/pcp/pcw049.
    • (2016) Plant Cell Physiol , vol.57 , pp. 1058-1068
    • Mikami, M.1    Toki, S.2    Endo, M.3
  • 29
    • 84960392032 scopus 로고    scopus 로고
    • Genome-wide target specificities of CRISPR-Cas9 nucleases revealed by multiplex Digenome-seq
    • 29 Kim, D., Kim, S., Kim, S., Park, J., Kim, J.-S., Genome-wide target specificities of CRISPR-Cas9 nucleases revealed by multiplex Digenome-seq. Genome Res 26 (2016), 406–415, 10.1101/gr.199588.115.
    • (2016) Genome Res , vol.26 , pp. 406-415
    • Kim, D.1    Kim, S.2    Kim, S.3    Park, J.4    Kim, J.-S.5
  • 30
    • 84963941043 scopus 로고    scopus 로고
    • High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects
    • 30 Kleinstiver, B.P., Pattanayak, V., Prew, M.S., Tsai, S.Q., Nguyen, N.T., Zheng, Z., Joung, J.K., High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. Nature 529 (2016), 490–495, 10.1038/nature16526.
    • (2016) Nature , vol.529 , pp. 490-495
    • Kleinstiver, B.P.1    Pattanayak, V.2    Prew, M.S.3    Tsai, S.Q.4    Nguyen, N.T.5    Zheng, Z.6    Joung, J.K.7
  • 32
    • 84916624400 scopus 로고    scopus 로고
    • The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny
    • 32 Schiml, S., Fauser, F., Puchta, H., The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny. Plant J Cell Mol Biol 80 (2014), 1139–1150, 10.1111/tpj.12704.
    • (2014) Plant J Cell Mol Biol , vol.80 , pp. 1139-1150
    • Schiml, S.1    Fauser, F.2    Puchta, H.3
  • 33
    • 84976505796 scopus 로고    scopus 로고
    • Repair of adjacent single-strand breaks is often accompanied by the formation of tandem sequence duplications in plant genomes
    • Shows that by the paired nickase approach mutations can be induced efficiently in genetic, intergenic and heterochromatic region of the plant genome.
    • 33• Schiml, S., Fauser, F., Puchta, H., Repair of adjacent single-strand breaks is often accompanied by the formation of tandem sequence duplications in plant genomes. Proc Natl Acad Sci U S A 113 (2016), 7266–7271, 10.1073/pnas.1603823113 Shows that by the paired nickase approach mutations can be induced efficiently in genetic, intergenic and heterochromatic region of the plant genome.
    • (2016) Proc Natl Acad Sci U S A , vol.113 , pp. 7266-7271
    • Schiml, S.1    Fauser, F.2    Puchta, H.3
  • 34
    • 84957669261 scopus 로고    scopus 로고
    • Lessons from domestication: targeting Cis-regulatory elements for crop improvement
    • 34 Swinnen, G., Goossens, A., Pauwels, L., Lessons from domestication: targeting Cis-regulatory elements for crop improvement. Trends Plant Sci 21 (2016), 506–515, 10.1016/j.tplants.2016.01.014.
    • (2016) Trends Plant Sci , vol.21 , pp. 506-515
    • Swinnen, G.1    Goossens, A.2    Pauwels, L.3
  • 35
    • 84964409193 scopus 로고    scopus 로고
    • Efficient multiplex mutagenesis by RNA-guided Cas9 and its use in the characterization of regulatory elements in the AGAMOUS gene
    • 35 Yan, W., Chen, D., Kaufmann, K., Efficient multiplex mutagenesis by RNA-guided Cas9 and its use in the characterization of regulatory elements in the AGAMOUS gene. Plant Methods, 12, 2016, 23, 10.1186/s13007-016-0125-7.
    • (2016) Plant Methods , vol.12 , pp. 23
    • Yan, W.1    Chen, D.2    Kaufmann, K.3
  • 38
    • 84921549293 scopus 로고    scopus 로고
    • Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice
    • 38 Zhou, H., Liu, B., Weeks, D.P., Spalding, M.H., Yang, B., Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice. Nucleic Acids Res 42 (2014), 10903–10914, 10.1093/nar/gku806.
    • (2014) Nucleic Acids Res , vol.42 , pp. 10903-10914
    • Zhou, H.1    Liu, B.2    Weeks, D.P.3    Spalding, M.H.4    Yang, B.5
  • 40
    • 84978319071 scopus 로고    scopus 로고
    • Genome editing of structural variations: modeling and gene correction
    • 40 Park, C.-Y., Sung, J.J., Kim, D.-W., Genome editing of structural variations: modeling and gene correction. Trends Biotechnol 34 (2016), 548–561, 10.1016/j.tibtech.2016.02.011.
    • (2016) Trends Biotechnol , vol.34 , pp. 548-561
    • Park, C.-Y.1    Sung, J.J.2    Kim, D.-W.3
  • 42
    • 34047128282 scopus 로고    scopus 로고
    • Two unlinked double-strand breaks can induce reciprocal exchanges in plant genomes via homologous recombination and nonhomologous end joining
    • 42 Pacher, M., Schmidt-Puchta, W., Puchta, H., Two unlinked double-strand breaks can induce reciprocal exchanges in plant genomes via homologous recombination and nonhomologous end joining. Genetics 175 (2007), 21–29, 10.1534/genetics.106.065185.
    • (2007) Genetics , vol.175 , pp. 21-29
    • Pacher, M.1    Schmidt-Puchta, W.2    Puchta, H.3
  • 43
    • 84932193560 scopus 로고    scopus 로고
    • Meiotic recombination hotspots – a comparative view
    • 43 Choi, K., Henderson, I.R., Meiotic recombination hotspots – a comparative view. Plant J Cell Mol Biol 83 (2015), 52–61, 10.1111/tpj.12870.
    • (2015) Plant J Cell Mol Biol , vol.83 , pp. 52-61
    • Choi, K.1    Henderson, I.R.2
  • 44
    • 0037131525 scopus 로고    scopus 로고
    • Targeted stimulation of meiotic recombination
    • Demonstrated that at least in yeast, mitotic recombination can be controlled by fusion of a DNA binding domain with DSB inducing proteins.
    • 44•• Pecina, A., Smith, K.N., Mezard, C., Murakami, H., Ohta, K., Nicolas, A., Targeted stimulation of meiotic recombination. Cell 111 (2002), 173–184 Demonstrated that at least in yeast, mitotic recombination can be controlled by fusion of a DNA binding domain with DSB inducing proteins.
    • (2002) Cell , vol.111 , pp. 173-184
    • Pecina, A.1    Smith, K.N.2    Mezard, C.3    Murakami, H.4    Ohta, K.5    Nicolas, A.6
  • 45
    • 84966293747 scopus 로고    scopus 로고
    • CRISPR-directed mitotic recombination enables genetic mapping without crosses
    • 45 Sadhu, M.J., Bloom, J.S., Day, L., Kruglyak, L., CRISPR-directed mitotic recombination enables genetic mapping without crosses. Science (New York, NY) 352 (2016), 1113–1116, 10.1126/science.aaf5124.
    • (2016) Science (New York, NY) , vol.352 , pp. 1113-1116
    • Sadhu, M.J.1    Bloom, J.S.2    Day, L.3    Kruglyak, L.4
  • 46
    • 84963769440 scopus 로고    scopus 로고
    • Homology-based double-strand break-induced genome engineering in plants
    • 46 Steinert, J., Schiml, S., Puchta, H., Homology-based double-strand break-induced genome engineering in plants. Plant Cell Rep, 2016, 10.1007/s00299-016-1981-3.
    • (2016) Plant Cell Rep
    • Steinert, J.1    Schiml, S.2    Puchta, H.3
  • 47
    • 84905123594 scopus 로고    scopus 로고
    • DNA recombination in somatic plant cells: mechanisms and evolutionary consequences
    • 47 Knoll, A., Fauser, F., Puchta, H., DNA recombination in somatic plant cells: mechanisms and evolutionary consequences. Chromosome Res 22 (2014), 191–201, 10.1007/s10577-014-9415-y.
    • (2014) Chromosome Res , vol.22 , pp. 191-201
    • Knoll, A.1    Fauser, F.2    Puchta, H.3
  • 48
    • 84860788027 scopus 로고    scopus 로고
    • In planta gene targeting
    • Shows that DSB induced gene targeting in plants can be improved by activation of the targeting vector by cutting it out of the plant genome.
    • 48• Fauser, F., Roth, N., Pacher, M., Ilg, G., Sánchez-Fernández, R., Biesgen, C., Puchta, H., In planta gene targeting. Proc Natl Acad Sci U S A 109 (2012), 7535–7540, 10.1073/pnas.1202191109 Shows that DSB induced gene targeting in plants can be improved by activation of the targeting vector by cutting it out of the plant genome.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 7535-7540
    • Fauser, F.1    Roth, N.2    Pacher, M.3    Ilg, G.4    Sánchez-Fernández, R.5    Biesgen, C.6    Puchta, H.7
  • 49
    • 84962909415 scopus 로고    scopus 로고
    • An alternative strategy for targeted gene replacement in plants using a dual-sgRNA/Cas9 design
    • 49 Zhao, Y., Zhang, C., Liu, W., Gao, W., Liu, C., Song, G., Li, W.-X., Mao, L., Chen, B., Xu, Y., et al. An alternative strategy for targeted gene replacement in plants using a dual-sgRNA/Cas9 design. Sci Rep, 6, 2016, 23890, 10.1038/srep23890.
    • (2016) Sci Rep , vol.6 , pp. 23890
    • Zhao, Y.1    Zhang, C.2    Liu, W.3    Gao, W.4    Liu, C.5    Song, G.6    Li, W.-X.7    Mao, L.8    Chen, B.9    Xu, Y.10
  • 50
    • 84896882685 scopus 로고    scopus 로고
    • DNA replicons for plant genome engineering
    • Shows that DSB induced gene targeting in plants can be enhanced by activation of the targeting vector by a viral replicon.
    • 50• Baltes, N.J., Gil-Humanes, J., Cermak, T., Atkins, P.A., Voytas, D.F., DNA replicons for plant genome engineering. Plant Cell 26 (2014), 151–163, 10.1105/tpc.113.119792 Shows that DSB induced gene targeting in plants can be enhanced by activation of the targeting vector by a viral replicon.
    • (2014) Plant Cell , vol.26 , pp. 151-163
    • Baltes, N.J.1    Gil-Humanes, J.2    Cermak, T.3    Atkins, P.A.4    Voytas, D.F.5
  • 51
    • 84946416320 scopus 로고    scopus 로고
    • High-frequency, precise modification of the tomato genome
    • 51 Cermak, T., Baltes, N.J., Cegan, R., Zhang, Y., Voytas, D.F., High-frequency, precise modification of the tomato genome. Genome Biol, 16, 2015, 232, 10.1186/s13059-015-0796-9.
    • (2015) Genome Biol , vol.16 , pp. 232
    • Cermak, T.1    Baltes, N.J.2    Cegan, R.3    Zhang, Y.4    Voytas, D.F.5
  • 54
    • 84942901283 scopus 로고    scopus 로고
    • Targeted mutagenesis, precise gene editing, and site-specific gene insertion in maize using Cas9 and guide RNA
    • 54 Svitashev, S., Young, J.K., Schwartz, C., Gao, H., Falco, S.C., Cigan, A.M., Targeted mutagenesis, precise gene editing, and site-specific gene insertion in maize using Cas9 and guide RNA. Plant Physiol 169 (2015), 931–945, 10.1104/pp.15.00793.
    • (2015) Plant Physiol , vol.169 , pp. 931-945
    • Svitashev, S.1    Young, J.K.2    Schwartz, C.3    Gao, H.4    Falco, S.C.5    Cigan, A.M.6
  • 55
    • 84990199472 scopus 로고    scopus 로고
    • Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9
    • Shows that site-specific gene insertion can be achieved by Ca9-induced NHEJ in plants.
    • 55• Li, J., Meng, X., Zong, Y., Chen, K., Zhang, H., Liu, J., Li, J., Gao, C., Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9. Nat Plants, 2, 2016, 16139, 10.1038/nplants.2016.139 Shows that site-specific gene insertion can be achieved by Ca9-induced NHEJ in plants.
    • (2016) Nat Plants , vol.2 , pp. 16139
    • Li, J.1    Meng, X.2    Zong, Y.3    Chen, K.4    Zhang, H.5    Liu, J.6    Li, J.7    Gao, C.8
  • 58
    • 84961290066 scopus 로고    scopus 로고
    • Editing the epigenome: technologies for programmable transcription and epigenetic modulation
    • 58 Thakore, P.I., Black, J.B., Hilton, I.B., Gersbach, C.A., Editing the epigenome: technologies for programmable transcription and epigenetic modulation. Nat Methods 13 (2016), 127–137, 10.1038/nmeth.3733.
    • (2016) Nat Methods , vol.13 , pp. 127-137
    • Thakore, P.I.1    Black, J.B.2    Hilton, I.B.3    Gersbach, C.A.4
  • 61
    • 84979911627 scopus 로고    scopus 로고
    • CRISPR-dCas9 mediated TET1 targeting for selective DNA demethylation at BRCA1 promoter
    • 61 Choudhury, S.R., Cui, Y., Lubecka, K., Stefanska, B., Irudayaraj, J., CRISPR-dCas9 mediated TET1 targeting for selective DNA demethylation at BRCA1 promoter. Oncotarget, 2016, 10.18632/oncotarget.10234.
    • (2016) Oncotarget
    • Choudhury, S.R.1    Cui, Y.2    Lubecka, K.3    Stefanska, B.4    Irudayaraj, J.5
  • 62
    • 33746807366 scopus 로고    scopus 로고
    • Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation
    • 62 Agius, F., Kapoor, A., Zhu, J.-K., Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation. Proc Natl Acad Sci U S A 103 (2006), 11796–11801, 10.1073/pnas.0603563103.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 11796-11801
    • Agius, F.1    Kapoor, A.2    Zhu, J.-K.3
  • 64
    • 84928212884 scopus 로고    scopus 로고
    • RNA-guided transcriptional regulation in planta via synthetic dCas9-based transcription factors
    • The first report that dCas9 for transcriptional regulation in plants.
    • 64• Piatek, A., Ali, Z., Baazim, H., Li, L., Abulfaraj, A., Al-Shareef, S., Aouida, M., Mahfouz, M.M., RNA-guided transcriptional regulation in planta via synthetic dCas9-based transcription factors. Plant Biotechnol J 13 (2015), 578–589, 10.1111/pbi.12284 The first report that dCas9 for transcriptional regulation in plants.
    • (2015) Plant Biotechnol J , vol.13 , pp. 578-589
    • Piatek, A.1    Ali, Z.2    Baazim, H.3    Li, L.4    Abulfaraj, A.5    Al-Shareef, S.6    Aouida, M.7    Mahfouz, M.M.8
  • 67
    • 84966908028 scopus 로고    scopus 로고
    • Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow
    • 67 Ma, H., Tu, L.-C., Naseri, A., Huisman, M., Zhang, S., Grunwald, D., Pederson, T., Multiplexed labeling of genomic loci with dCas9 and engineered sgRNAs using CRISPRainbow. Nat Biotechnol 34 (2016), 528–530, 10.1038/nbt.3526.
    • (2016) Nat Biotechnol , vol.34 , pp. 528-530
    • Ma, H.1    Tu, L.-C.2    Naseri, A.3    Huisman, M.4    Zhang, S.5    Grunwald, D.6    Pederson, T.7
  • 68
    • 84971006562 scopus 로고    scopus 로고
    • Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage
    • 68 Komor, A.C., Kim, Y.B., Packer, M.S., Zuris, J.A., Liu, D.R., Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage. Nature 533 (2016), 420–424, 10.1038/nature17946.
    • (2016) Nature , vol.533 , pp. 420-424
    • Komor, A.C.1    Kim, Y.B.2    Packer, M.S.3    Zuris, J.A.4    Liu, D.R.5
  • 71
    • 84961350912 scopus 로고    scopus 로고
    • Highly efficient heritable plant genome engineering using Cas9 orthologues from Streptococcus thermophilus and Staphylococcus aureus
    • 71 Steinert, J., Schiml, S., Fauser, F., Puchta, H., Highly efficient heritable plant genome engineering using Cas9 orthologues from Streptococcus thermophilus and Staphylococcus aureus. Plant J Cell Mol Biol 84 (2015), 1295–1305, 10.1111/tpj.13078.
    • (2015) Plant J Cell Mol Biol , vol.84 , pp. 1295-1305
    • Steinert, J.1    Schiml, S.2    Fauser, F.3    Puchta, H.4
  • 72
    • 84971254394 scopus 로고    scopus 로고
    • Highly specific targeted mutagenesis in plants using Staphylococcus aureus Cas9
    • 72 Kaya, H., Mikami, M., Endo, A., Endo, M., Toki, S., Highly specific targeted mutagenesis in plants using Staphylococcus aureus Cas9. Sci Rep, 6, 2016, 26871, 10.1038/srep26871.
    • (2016) Sci Rep , vol.6 , pp. 26871
    • Kaya, H.1    Mikami, M.2    Endo, A.3    Endo, M.4    Toki, S.5
  • 73
    • 84947730555 scopus 로고    scopus 로고
    • Rapid characterization of CRISPR-Cas9 protospacer adjacent motif sequence elements
    • 73 Karvelis, T., Gasiunas, G., Young, J., Bigelyte, G., Silanskas, A., Cigan, M., Siksnys, V., Rapid characterization of CRISPR-Cas9 protospacer adjacent motif sequence elements. Genome Biol, 16, 2015, 253, 10.1186/s13059-015-0818-7.
    • (2015) Genome Biol , vol.16 , pp. 253
    • Karvelis, T.1    Gasiunas, G.2    Young, J.3    Bigelyte, G.4    Silanskas, A.5    Cigan, M.6    Siksnys, V.7
  • 74
    • 85027953332 scopus 로고    scopus 로고
    • Using CRISPR/Cas in three dimensions: towards synthetic plant genomes, transcriptomes and epigenomes
    • 74 Puchta, H., Using CRISPR/Cas in three dimensions: towards synthetic plant genomes, transcriptomes and epigenomes. Plant J Cell Mol Biol 87 (2016), 5–15, 10.1111/tpj.13100.
    • (2016) Plant J Cell Mol Biol , vol.87 , pp. 5-15
    • Puchta, H.1
  • 75
    • 84975678715 scopus 로고    scopus 로고
    • Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system
    • Fist characterization of Cpf1 which will become one of the main tools for genome engineering.
    • 75•• Zetsche, B., Gootenberg, J.S., Abudayyeh, O.O., Slaymaker, I.M., Makarova, K.S., Essletzbichler, P., Volz, S.E., Joung, J., van der Oost, J., Regev, A., et al. Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system. Cell 163 (2015), 759–771, 10.1016/j.cell.2015.09.038 Fist characterization of Cpf1 which will become one of the main tools for genome engineering.
    • (2015) Cell , vol.163 , pp. 759-771
    • Zetsche, B.1    Gootenberg, J.S.2    Abudayyeh, O.O.3    Slaymaker, I.M.4    Makarova, K.S.5    Essletzbichler, P.6    Volz, S.E.7    Joung, J.8    van der Oost, J.9    Regev, A.10
  • 76
    • 84964862130 scopus 로고    scopus 로고
    • The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA
    • 76 Fonfara, I., Richter, H., Bratovic, M., Le Rhun, A., Charpentier, E., The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA. Nature 532 (2016), 517–521, 10.1038/nature17945.
    • (2016) Nature , vol.532 , pp. 517-521
    • Fonfara, I.1    Richter, H.2    Bratovic, M.3    Le Rhun, A.4    Charpentier, E.5
  • 77
    • 84981318543 scopus 로고    scopus 로고
    • Genome-wide analysis reveals specificities of Cpf1 endonucleases in human cells
    • 77 Kim, D., Kim, J., Hur, J.K., Been, K.W., Yoon, S.-H., Kim, J.-S., Genome-wide analysis reveals specificities of Cpf1 endonucleases in human cells. Nat Biotechnol 34 (2016), 863–868, 10.1038/nbt.3609.
    • (2016) Nat Biotechnol , vol.34 , pp. 863-868
    • Kim, D.1    Kim, J.2    Hur, J.K.3    Been, K.W.4    Yoon, S.-H.5    Kim, J.-S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.