Genome sequence of Chlamydia suis MD56, isolated from the conjunctiva of a weaned piglet

Genome Announcements

Volumn 2, Issue 3, 2014, Pages

  Donati, Manuela ^a   Huot Creasy, Heather ^b   Humphrys, Michael ^b   Paolo, Maria Di ^a   Di Francesco, Antonietta ^a   Myers, Garry S A ^b  

^a UNIVERSITY OF BOLOGNA   (Italy)

^b UNIVERSITY OF MARYLAND SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84999288014     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00425-14     Document Type: Article

References (7)

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2. Schautteet K, Vanrompay D. 2011. Chlamydiaceae infections in pig. Vet. Res. 42:29. http://dx.doi.org/10.1186/1297-9716-42-29.
3. Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829. http://dx.doi.org/10.1101/gr.074492.107.
4. Galens K, Orvis J, Daugherty S, Creasy HH, Angiuoli S, White O, Wortman J, Mahurkar A, Giglio MG. 2011. The IGS standard operating procedure for automated prokaryotic annotation. Stand. Genomic Sci 4:244-251. http://dx.doi.org/10.4056/sigs.1223234.
5. Read TD, Brunham RC, Shen C, Gill SR, Heidelberg JF, White O, Hickey EK, Peterson J, Utterback T, Berry K, Bass S, Linher K, Weidman J, Khouri H, Craven B, Bowman C, Dodson R, Gwinn M, Nelson W, DeBoy R, Kolonay J, McClarty G, Salzberg SL, Eisen J, Fraser CM. 2000. Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39. Nucleic Acids Res. 28:1397-1406. http://dx.doi.org/10.1093 /nar/28.6.1397.
6. Read TD, Myers GS, Brunham RC, Nelson WC, Paulsen IT, Heidelberg J, Holtzapple E, Khouri H, Federova NB, Carty HA, Umayam LA, Haft DH, Peterson J, Beanan MJ, White O, Salzberg SL, Hsia RC, McClarty G, Rank RG, Bavoil PM, Fraser CM. 2003. Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae. Nucleic Acids Res. 31: 2134-2147. http://dx.doi.org/10.1093/nar/gkg321.
7. Myers GSA, Crabtree J, Huot-Creasy H. 2012. Deep and wide: comparative genomics of Chlamydia, p 27-50. In Tan M, Bavoil P (ed), Intracellular pathogens I: Chlamydiales. ASM Press, Washington, DC.