Genome sequence of the Asiatic species Borrelia persica

Genome Announcements

Volumn 2, Issue 1, 2014, Pages

  Elbir, Haitham ^a   Larsson, Pär ^b   Normark, Johan ^a   Upreti, Mukunda ^a   Korenberg, Edward ^c   Larsson, Christer ^a   Bergström, Sven ^a  

^a UMEÅ UNIVERSITY   (Sweden)

^b SWEDISH DEFENCE RESEARCH AGENCY   (Sweden)

^c INSTITUTE OF BIOMEDICAL CHEMISTRY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84998865198     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.e01127-13     Document Type: Article

References (12)

1. Barmaki A, Rafinejad J, Vatandoost H, Telmadarraiy Z, Mohtarami F, Leghaei Sh, Oshaghi M. 2010. Study on presence of Borrelia persica in soft ticks in Western Iran. Iran J. Arthropod. Borne Dis. 4:19-25.
2. Kryuchechnikov VN, Korenberg EI, Sherbakov SV. 1982. Experience on the identifying of strains differences in relapsing fever pathogen. Med. Parasitol. Parasit. Dis. 4:74-79. (In Russian.)
3. Barbour AG. 1984. Isolation and cultivation of Lyme disease Spirochetes. Yale J. Biol. Med. 57:521-525.
4. Hyatt D, Chen GL, Locascio PF, Land ML, Larimer FW, Hauser LJ. 2010 Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics 11:119. http://dx.doi.org/10.1186/1471-2105-11-119.
5. Laslett D, Canback B. 2004. ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. Nucleic Acids Res. 32:11-16. http://dx.doi.org/10.1093/nar/gkh152
6. Tatusov RL, Galperin MY, Natale DA, Koonin EV. 2000. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28:33-36. http://dx.doi.org/10.1093/nar/28.1.33.
7. Sonnhammer EL, Eddy SR, Durbin R. 1997. Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28:405-420. http://dx.doi.org/10.1002/(SICI)1097-0134(199707)28:3-4 05::AID-PROT10-3.0.CO;2-L.
8. Zhou Y, Liang Y, Lynch KH, Dennis JJ, Wishart DS. 2011. PHAST: a fast phage search tool. Nucleic Acids Res. 39(Web Server issue):W347-W352. http://dx.doi.org/10.1093/nar/gkr485.
9. Bose M, Barber RD. 2006. Prophage Finder: a prophage loci prediction tool for prokaryotic genome sequences. In Silico Biol. 6:223-227.
10. Lescot M, Audic S, Robert C, Nguyen TT, Blanc G, Cutler SJ, Wincker P, Couloux A, Claverie JM, Raoult D, Drancourt M. 2008. The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degraded subset of tick-borne Borrelia duttonii. PLoS Genet. 4:e1000185. http://dx.doi.org/10.1371/journal.pgen.1000 185.
11. Elbir H, Gimenez G, Robert C, Bergström S, Cutler S, Raoult D, Drancourt M. 2012. Complete genome sequence of Borrelia crocidurae. J. Bacteriol. 194:3723-3724. http://dx.doi.org/10.1128/JB.00118-12.
12. Konstantinidis KT, Tiedje JM. 2005. Towards a genome-based taxonomy for prokaryotes. J. Bacteriol. 187:6258-6264. http://dx.doi.org/10.1128/J B.187.18.6258-6264.2005.