-
1
-
-
0019195919
-
Characterization of Tn904 insertions in octopine Ti plasmid mutants of Agrobacterium tumefaciens
-
Ooms G, Klapwijk PM, Poulis JA, Schilperoort RA. 1980. Characterization of Tn904 insertions in octopine Ti plasmid mutants of Agrobacterium tumefaciens. J. Bacteriol. 144:82-91.
-
(1980)
J. Bacteriol
, vol.144
, pp. 82-91
-
-
Ooms, G.1
Klapwijk, P.M.2
Poulis, J.A.3
Schilperoort, R.A.4
-
2
-
-
0020036848
-
Octopine Ti-plasmid deletion mutants of Agrobacterium tumefaciens with emphasis on the right side of the T-region
-
Ooms G, Hooykaas PJJ, Van Veen RJM, Van Beelen P, Regensburg-Tuïnk TJG, Schilperoort RA. 1982. Octopine Ti-plasmid deletion mutants of Agrobacterium tumefaciens with emphasis on the right side of the T-region. Plasmid 7:15-29. http://dx.doi.org/10.1016/0147-619X(82)900 23-3.
-
(1982)
Plasmid
, vol.7
, pp. 15-29
-
-
Ooms, G.1
Hooykaas, P.J.J.2
Van Veen, R.J.M.3
Van Beelen, P.4
Regensburg-Tuïnk, T.J.G.5
Schilperoort, R.A.6
-
3
-
-
0020574525
-
A binary plant vector strategy based on separation of vir-and T-region of the Agrobacterium tumefaciens Ti-plasmid
-
Hoekema A, Hirsch PR, Hooykaas PJJ, Schilperoort RA. 1983. A binary plant vector strategy based on separation of vir-and T-region of the Agrobacterium tumefaciens Ti-plasmid. Nature 303:179-180. http://dx.doi.org/10.1038/303179a0.
-
(1983)
Nature
, vol.303
, pp. 179-180
-
-
Hoekema, A.1
Hirsch, P.R.2
Hooykaas, P.J.J.3
Schilperoort, R.A.4
-
4
-
-
78649358717
-
Quake: quality-aware detection and correction of sequencing errors
-
Kelley DR, Schatz MC, Salzberg SL. 2010. Quake: quality-aware detection and correction of sequencing errors. Genome Biol. 11:R116. http://dx.doi.org/10.1186/gb-2010-11-11-r116.
-
(2010)
Genome Biol
, vol.11
, pp. R116
-
-
Kelley, D.R.1
Schatz, M.C.2
Salzberg, S.L.3
-
5
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829. http://dx.doi.org/10.1101/gr.074492.107.
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
6
-
-
40549120596
-
The RAST server: Rapid Annotations using Subsystems Technology
-
Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. 2008. The RAST server: Rapid Annotations using Subsystems Technology. BMC Genomics 9:75. http://dx.doi.org/10.1186/1471-2164-9-75.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
DeJongh, M.4
Disz, T.5
Edwards, R.A.6
Formsma, K.7
Gerdes, S.8
Glass, E.M.9
Kubal, M.10
Meyer, F.11
Olsen, G.J.12
Olson, R.13
Osterman, A.L.14
Overbeek, R.A.15
McNeil, L.K.16
Paarmann, D.17
Paczian, T.18
Parrello, B.19
Pusch, G.D.20
Reich, C.21
Stevens, R.22
Vassieva, O.23
Vonstein, V.24
Wilke, A.25
Zagnitko, O.26
more..
-
7
-
-
0033945446
-
The bases of crown gall tumorigenesis
-
Zhu J, Oger PM, Schrammeijer B, Hooykaas PJJ, Farrand SK, Winans SC. 2000. The bases of crown gall tumorigenesis. J. Bacteriol. 182: 3885-3895. http://dx.doi.org/10.1128/JB.182.14.3885-3895.2000.
-
(2000)
J. Bacteriol
, vol.182
, pp. 3885-3895
-
-
Zhu, J.1
Oger, P.M.2
Schrammeijer, B.3
Hooykaas, P.J.J.4
Farrand, S.K.5
Winans, S.C.6
-
8
-
-
78149466102
-
Rapid and efficient identification of Agrobacterium species by recA allele analysis
-
Costechareyre D, Rhouma A, Lavire C, Portier P, Chapulliot D, Bertolla F, Boubaker A, Dessaux Y, Nesme X. 2010. Rapid and efficient identification of Agrobacterium species by recA allele analysis. Microb. Ecol. 60:862-872. http://dx.doi.org/10.1007/s00248-010-9685-7.
-
(2010)
Microb. Ecol
, vol.60
, pp. 862-872
-
-
Costechareyre, D.1
Rhouma, A.2
Lavire, C.3
Portier, P.4
Chapulliot, D.5
Bertolla, F.6
Boubaker, A.7
Dessaux, Y.8
Nesme, X.9
-
9
-
-
65249095980
-
Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria
-
Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW. 2009. Genome sequences of three Agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria. J. Bacteriol. 191:2501-2511. http://dx.doi.org/10.1128/JB.01779-08.
-
(2009)
J. Bacteriol
, vol.191
, pp. 2501-2511
-
-
Slater, S.C.1
Goldman, B.S.2
Goodner, B.3
Setubal, J.C.4
Farrand, S.K.5
Nester, E.W.6
Burr, T.J.7
Banta, L.8
Dickerman, A.W.9
Paulsen, I.10
Otten, L.11
Suen, G.12
Welch, R.13
Almeida, N.F.14
Arnold, F.15
Burton, O.T.16
Du, Z.17
Ewing, A.18
Godsy, E.19
Heisel, S.20
Houmiel, K.L.21
Jhaveri, J.22
Lu, J.23
Miller, N.M.24
Norton, S.25
Chen, Q.26
Phoolcharoen, W.27
Ohlin, V.28
Ondrusek, D.29
Pride, N.30
Stricklin, S.L.31
Sun, J.32
Wheeler, C.33
Wilson, L.34
Zhu, H.35
Wood, D.W.36
more..
-
10
-
-
84874752967
-
Reconciliation of sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium
-
Slater S, Setubal JC, Goodner B, Houmiel K, Sun J, Kaul R, Goldman BS, Farrand SK, Almeida N, Jr, Burr T, Nester E, Rhoads DM, Kadoi R, Ostheimer T, Pride N, Sabo A, Henry E, Telepak E, Cromes L, Harkleroad A, Oliphant L, Pratt-Szegila P, Welch R, Wood D. 2013. Reconciliation of sequence data and updated annotation of the genome of Agrobacterium tumefaciens C58, and distribution of a linear chromosome in the genus Agrobacterium. Appl. Environ. Microbiol. 79:1414-1417. http://dx.doi.org/10.1128/AEM.03192-12.
-
(2013)
Appl. Environ. Microbiol
, vol.79
, pp. 1414-1417
-
-
Slater, S.1
Setubal, J.C.2
Goodner, B.3
Houmiel, K.4
Sun, J.5
Kaul, R.6
Goldman, B.S.7
Farrand, S.K.8
Almeida, N.9
Burr, T.10
Nester, E.11
Rhoads, D.M.12
Kadoi, R.13
Ostheimer, T.14
Pride, N.15
Sabo, A.16
Henry, E.17
Telepak, E.18
Cromes, L.19
Harkleroad, A.20
Oliphant, L.21
Pratt-Szegila, P.22
Welch, R.23
Wood, D.24
more..
-
11
-
-
79961207559
-
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
-
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A. 2011. Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. J. Biotechnol. 155:50-62. http://dx.doi.org/10.1016/j.jbiotec.2011.01.010.
-
(2011)
J. Biotechnol
, vol.155
, pp. 50-62
-
-
Wibberg, D.1
Blom, J.2
Jaenicke, S.3
Kollin, F.4
Rupp, O.5
Scharf, B.6
Schneiker-Bekel, S.7
Sczcepanowski, R.8
Goesmann, A.9
Setubal, J.C.10
Schmitt, R.11
Pühler, A.12
Schlüter, A.13
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