Full-genome sequence of a rare human G3P[9] rotavirus strain

Genome Announcements

Volumn 2, Issue 2, 2014, Pages

  Mijatovic Rustempasic, Slavica ^a   Roy, Sunando ^a   Sturgeon, Michele ^a   Rungsrisuriyachai, Kunchala ^a   Esona, Mathew D ^a   DeGroat, Dona ^b   Qin, Xuan ^b   Cortese, Margaret M ^a   Bowen, Michael D ^a  

^a NATIONAL CENTER FOR IMMUNIZATION AND RESPIRATORY DISEASES   (United States)

^b SEATTLE CHILDREN S HOSPITAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84998673650     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00143-14     Document Type: Article

References (10)

1. Estes MK, Kapikian AZ. 2007. Rotaviruses, p 1917-1974. In Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, Roizman B, Straus SE (ed), Fields virology, 5th ed, vol 2. Lippincott Williams & Wilkins, Philadelphia, PA.
2. Matthijnssens J, Ciarlet M, McDonald SM, Attoui H, Bányai K, Brister JR, Buesa J, Esona MD, Estes MK, Gentsch JR, Iturriza-Gómara M, Johne R, Kirkwood CD, Martella V, Mertens PP, Nakagomi O, Parreño V, Rahman M, Ruggeri FM, Saif LJ, Santos N, Steyer A, Taniguchi K, Patton JT, Desselberger U, Van Ranst M. 2011. Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG). Arch. Virol. 156:1397-1413. http://dx.doi.org/10.1007/s 00705-011-1006-z.
3. Matthijnssens J, Ciarlet M, Heiman E, Arijs I, Delbeke T, McDonald SM, Palombo EA, Iturriza-Gómara M, Maes P, Patton JT, Rahman M, Van Ranst M. 2008. Full genome-based classification of rotaviruses reveals a common origin between human Wa-Like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains. J. Virol. 82: 3204-3219. http://dx.doi.org/10.1128/JVI.02257-07.
4. Matthijnssens J, Taraporewala ZF, Yang H, Rao S, Yuan L, Cao D, Hoshino Y, Mertens PP, Carner GR, McNeal M, Sestak K, Van Ranst M, Patton JT. 2010. Simian rotaviruses possess divergent gene constellations that originated from interspecies transmission and reassortment. J. Virol. 84:2013-2026. http://dx.doi.org/10.1128/JVI.02081-09.
5. Matthijnssens J, Van Ranst M. 2012. Genotype constellation and evolution of group A rotaviruses infecting humans. Curr. Opin. Virol. 2:426-433. http://dx.doi.org/10.1016/j.coviro.2012.04.007.
6. De Grazia S, Giammanco GM, Potgieter CA, Matthijnssens J, Banyai K, Platia MA, Colomba C, Martella V. 2010. Unusual assortment of segments in 2 rare human rotavirus genomes. Emerg. Infect. Dis. 16: 859-862. http://dx.doi.org/10.3201/eid1605.091826.
7. Hull JJ, Teel EN, Kerin TK, Freeman MM, Esona MD, Gentsch JR, Cortese MM, Parashar UD, Glass RI, Bowen MD, National Rotavirus Strain Surveillance System, National Rotavirus Strain Surveillance S. 2011 United States rotavirus strain surveillance from to 2008: genotype prevalence before and after vaccine introduction. Pediatr. Infect. Dis. J. 30:S42-S47. http://dx.doi.org/10.1097/INF.0b013e3181fefd78.
8. Potgieter AC, Page NA, Liebenberg J, Wright IM, Landt O, van Dijk AA. 2009. Improved strategies for sequence-independent amplification and sequencing of viral double-stranded RNA genomes. J. Gen. Virol. 90:1423-1432. http://dx.doi.org/10.1099/vir.0.009381-0.
9. Grant L, Esona M, Gentsch J, Watt J, Reid R, Weatherholtz R, Santosham M, Parashar U, O'Brien K. 2011. Detection of G3P[3] and G3P[9] rotavirus strains in American Indian children with evidence of gene reassortment between human and animal rotaviruses. J. Med. Virol. 83:1288-1299. http://dx.doi.org/10.1002/jmv.22076.
10. Tsugawa T, Hoshino Y. 2008. Whole genome sequence and phylogenetic analyses reveal human rotavirus G3P[3] strains Ro1845 and HCR3A are examples of direct virion transmission of canine/feline rotaviruses to humans. Virology 380:344-353. http://dx.doi.org/10.10 16/j.virol.2008.07.041.