Microrheology with optical tweezers: Data analysis

New Journal of Physics

Volumn 14, Issue , 2012, Pages

  Tassieri, Manlio ^a   Evans, R M L ^b   Warren, Rebecca L ^a   Bailey, Nicholas J ^a   Cooper, Jonathan M ^a  

^a UNIVERSITY OF GLASGOW   (United Kingdom)

^b UNIVERSITY OF LEEDS   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

DATA HANDLING; INFORMATION ANALYSIS; NEWTONIAN LIQUIDS; VISCOELASTICITY;

BROWNIAN FLUCTUATIONS; FINITE SET; LINEAR VISCOELASTIC; MEAN SQUARE DISPLACEMENT; MICRORHEOLOGY; NEWTONIAN FLUIDS; OPTICALLY TRAPPED BEADS; TIME DEPENDENT;

OPTICAL TWEEZERS;

EID: 84994579822     PISSN: 13672630     EISSN: None     Source Type: Journal    
DOI: 10.1088/1367-2630/14/11/115032     Document Type: Article

References (82)

1. Ashkin A 1970 Acceleration and trapping of particles by radiation pressure Phys. Rev. Lett. 24 156-9
2. Meyer A, Marshall A, Bush B G and Furst E M 2006 Laser tweezer microrheology of a colloidal suspension J. Rheol. 50 77-92
3. Block S M, Blair D F and Berg H C 1989 Compliance of bacterial flagella measured with optical tweezers Nature 338 514-8
4. Finer J T, Simmons R M and Spudich J A 1994 Single myosin molecule mechanics: piconewton forces and nanometer steps Nature 368 113-9
5. Yoon Y-Z, Kotar J, Yoon G and Cicuta P 2008 The nonlinear mechanical response of the red blood cell Phys. Biol. 5 036007
6. Ashkin A and Dziedzic J M 1987 Optical trapping and manipulation of viruses and bacteria Science 235 1517-20
7. Tskhovrebova L, Trinick J, Sleep J A and Simmons R M 1997 Elasticity and unfolding of single molecules of the giant muscle protein titin Nature 387 308-12
8. Mehta A D, Rief M, Spudich J A, Smith D A and Simmons R M 1999 Single-molecule biomechanics with optical methods Science 283 1689-95
9. Ashkin A and Dziedzic J M 1971 Optical levitation by radiation pressure Appl. Phys. Lett. 19 283-5
10. Ashkin A, Dziedzic J M, Bjorkholm J E and Chu S 1986 Observation of a single-beam gradient force optical trap for dielectric particles Opt. Lett. 11 288-90
11. Gibson G M, Leach J, Keen S, Wright A J and Padgett M J 2008 Measuring the accuracy of particle position and force in optical tweezers using high-speed video microscopy Opt. Express 16 14561-70
12. Gittes F and Schmidt C F 1998 Interference model for back-focal-plane displacement detection in optical tweezers Opt. Lett. 23 7-9
13. Keen S, Leach J, Gibson G and Padgett M J 2007 Comparison of a high-speed camera and a quadrant detector for measuring displacements in optical tweezers J. Opt. A: Pure Appl. Opt. 9 S264-6
14. Mason T G and Weitz D A 1995 Optical measurements of frequency-dependent linear viscoelastic moduli of complex fluids Phys. Rev. Lett. 74 1250-3
15. Squires T M and Mason T G 2010 Fluid mechanics of microrheology Annu. Rev. Fluid Mech. 42 413-38
16. Molloy J E and Padgett M J 2002 Lights, action: optical tweezers Contemp. Phys. 43 241-58
17. Grier D G 2003 A revolution in optical manipulation Nature 424 810-6
18. Neuman K C and Block S M 2004 Optical trapping Rev. Sci. Instrum. 75 2787-809
19. Padgett M and Leonardo R D 2011 Holographic optical tweezers and their relevance to lab on chip devices Lab. Chip 11 1196-205
20. Yao A, Tassieri M, Padgett M and Cooper J 2009 Microrheology with optical tweezers Lab. Chip 9 2568-75
21. Furst E M 2005 Applications of laser tweezers in complex fluid rheology Curr. Opin. Colloid Interface Sci. 10 79-86
22. Moffitt J R, Chemla Y R, Smith S B and Bustamante C 2008 Recent advances in optical tweezers Annu. Rev. Biochem. 77 205-28
23. Frases S, Pontes B, Nimrichter L, Rodrigues M L, Viana N B and Casadevall A 2009 The elastic properties of the Cryptococcus neoformans capsule Biophys. J. 97 937-45
24. Watts F, Tan L E, Tassieri M, McAlinden N, Wilson C G, Girkin J M and Wright A J 2011 The viscoelastic properties of the vitreous humor measured using an optically trapped local probe Proc. SPIE 8097 80970H
25. Pesce G, De Luca A C, Rusciano G, Netti P A, Fusco S and Sasso A 2009 Microrheology of complex fluids using optical tweezers: a comparison with macrorheological measurements J. Opt. A: Pure Appl. Opt. 11 034016
26. Kollmannsberger P and Fabry B 2011 Linear and nonlinear rheology of living cells Annu. Rev. Mater. Res. 41 75-97
27. Kuo S, Gelles J, Steuer E and Sheetz M 1991 Workshop on Motor Proteins (Cambridge, UK, September 1990); A model for kinesin movement from nanometer-level movements of kinesin and cytoplasmic dynein and force measurements J. Cell Sci. Suppl. 14 135-8
28. Pine D J, Weitz D A, Chaikin P M and Herbolzheimer E 1988 Diffusing-wave spectroscopy Phys. Rev. Lett. 60 1134-7
29. Weitz D A, Zhu J X, Durian D J, Gang H and Pine D J 1993 Diffusing-wave spectroscopy-the technique and some applications Phys. Scr. T49B 610-21
30. Okajima T and Tokumoto H 2008 Nanorheology of living cells investigated by atomic force microscopy Nihon Reoroji Gakkaishi 36 81-6
31. Bausch A R, Moller W and Sackmann E 1999 Measurement of local viscoelasticity and forces in living cells by magnetic tweezers Biophys. J. 76 573-9
32. Tassieri M, Waigh T A, Trinick J, Aggeli A and Evans R M L 2010 Analysis of the linear viscoelasticity of polyelectrolytes by magnetic microrheometry-pulsed creep experiments and the one particle response J. Rheol. 54 117-31
33. Brau R R, Ferrer J M, Lee H, Castro C E, Tam B K, Tarsa P B, Matsudaira P, Boyce M C, Kamm R D and Lang M J 2007 Passive and active microrheology with optical tweezers J. Opt. A: Pure Appl. Opt. 9 S103-12
34. Fischer M and Berg-Sorensen K 2007 Calibration of trapping force and response function of optical tweezers in viscoelastic media J. Opt. A: Pure Appl. Opt. 9 S239-50
35. Atakhorrami M, Sulkowska J I, Addas K M, Koenderink G H, Tang J X, Levine A J, MacKintosh F C and Schmidt C F 2006 Correlated fluctuations of microparticles in viscoelastic solutions: quantitative measurement of material properties by microrheology in the presence of optical traps Phys. Rev. E 73 061501
36. Tassieri M, Gibson G M, Evans R M L Yao A M, Warren R, Padgett M J and Cooper J M 2010 Measuring storage and loss moduli using optical tweezers: broadband microrheology Phys. Rev. E 81 026308
37. Preece D, Warren R, Evans R M L Gibson G M, Padgett M J, Cooper J M and Tassieri M 2011 Optical tweezers: wideband microrheology J. Opt. 13 044022
38. Valentine M T, Dewalt L E and Ou-Yang H D 1996 Forces on a colloidal particle in a polymer solution: a study using optical tweezers J. Phys.: Condens. Matter 8 9477-82
39. Valentine M T, Dewalt L E and Ou-Yang H D 1996 3rd Conf. on Liquid Matter (University of East Anglia, Norwich, UK, 6-10 July)
40. Starrs L and Bartlett P 2003 5th Conf. on Liquid Matter (Constance, Germany, 14-18 September) One- and two-point micro-rheology of viscoelastic media J. Phys.: Condens. Matter 15 S251-6
41. Waigh T A 2005 Microrheology of complex fluids Rep. Prog. Phys. 68 685-742
42. Pipe C J and McKinley G H 2009 Microfluidic rheometry Mech. Res. Commun. 36 110-20
43. Cicuta P and Donald A M 2007 Microrheology: a review of the method and applications Soft Matter 3 1449-55
44. Ferry J D 1980 Viscoelastic Properties of Polymers 3rd edn (New York: Wiley)
45. Hasan S W, Ghannam M T and Esmail N 2010 Heavy crude oil viscosity reduction and rheology for pipeline transportation Fuel 89 1095-100
46. Stokes J R and Davies G A 2007 Viscoelasticity of human whole saliva collected after acid and mechanical stimulation Biorheology 44 141-60
47. Gittes F, Schnurr B, Olmsted P D, MacKintosh F C and Schmidt C F 1997 Microscopic viscoelasticity: shear moduli of soft materials determined from thermal fluctuations Phys. Rev. Lett. 79 3286-9
48. Mason T G, Ganesan K, van Zanten J H, Wirtz D and Kuo S C 1997 Particle tracking microrheology of complex fluids Phys. Rev. Lett. 79 3282-5
49. Buchanan M, Atakhorrami M, Palierne J F and Schmidt C F 2005 Comparing macrorheology and one- and two-point microrheology in wormlike micelle solutions Macromolecules 38 8840-4
50. Crocker J C, Valentine M T, Weeks E R, Gisler T, Kaplan P D, Yodh A G and Weitz D A 2000 Two-point microrheology of inhomogeneous soft materials Phys. Rev. Lett. 85 888-91
51. Savin T and Doyle P S 2005 Static and dynamic errors in particle tracking microrheology Biophys. J. 88 623-38
52. Mason T G 2000 Estimating the viscoelastic moduli of complex fluids using the generalized Stokes-Einstein equation Rheol. Acta 39 371-8
53. Dasgupta B R, Tee S-Y, Crocker J C, Frisken B J and Weitz D A 2002 Microrheology of polyethylene oxide using diffusing wave spectroscopy and single scattering Phys. Rev. E 65 051505
54. Yanagishima T, Frenkel D, Kotar J and Eiser E 2011 Real-time monitoring of complex moduli from microrheology J. Phys.: Condens. Matter 23 194118
55. Evans R M L, Tassieri M, Auhl D and Waigh T A 2009 Direct conversion of rheological compliance measurements into storage and loss moduli Phys. Rev. E 80 012501
56. Gibson G M, Leach J, Keen S, Wright A J and Padgett M J 2008 Measuring the accuracy of particle position and force in optical tweezers using high-speed video microscopy Opt. Express 16 14561-70
57. Berg-Sorensen K and Flyvbjerg H 2004 Power spectrum analysis for optical tweezers Rev. Sci. Instrum. 75 594-612
58. Tolić-Nørrelykke S F, Schäffer E, Howard J, Pavone F S, Jülicher F and Flyvbjerg H 2006 Calibration of optical tweezers with positional detection in the back focal plane Rev. Sci. Instrum. 77 103101
59. Evans R M L 2009 Transforming from time to frequency without artefacts Br. Soc. Rheol. Bull. 50 76
60. Spruijt E, Sprakel J, Lemmers M, Cohen Stuart M A and van der Gucht J 2010 Relaxation dynamics at different time scales in electrostatic complexes: time-salt superposition Phys. Rev. Lett. 105 208301
61. Shannon C E 1949 Communication in the presence of noise Proc. IRE 37 10-21
62. Lathi B P 2004 Linear Systems and Signals (Oxford Series in Electrical and Computer Engineering) (Oxford: Oxford University Press)
63. Wu P, Huang R, Tischer C, Jonas A and Florin E-L 2009 Direct measurement of the nonconservative force field generated by optical tweezers Phys. Rev. Lett. 103 108101
64. Pesce G, Volpe G, De Luca A C, Rusciano G and Volpe G 2009 Quantitative assessment of non-conservative radiation forces in an optical trap Europhys. Lett. 86 38002
65. Franosch T, Grimm M, Belushkin M, Mor F M, Foffi G, Forró L and Jeney S 2011 Resonances arising from hydrodynamic memory in Brownian motion Nature 478 85-8
66. Jannasch A, Mahamdeh M and Schäffer E 2011 Inertial effects of a small Brownian particle cause a colored power spectral density of thermal noise Phys. Rev. Lett. 107 228301
67. Tassieri M, Evans R M L Barbu-Tudoran L, Trinick J and Waigh T A 2008 The self-assembly, elasticity and dynamics of cardiac thin filaments Biophys. J. 94 2170-8
68. Tassieri M, Evans R M L Barbu-Tudoran L, Nasir Khaname G, Trinick J and Waigh T A 2008 Dynamics of semiflexible polymer solutions in the highly entangled regime Phys. Rev. Lett. 101 198301
69. Addas K M, Schmidt C F and Tang J X 2004 Microrheology of solutions of semiflexible biopolymer filaments using laser tweezers interferometry Phys. Rev. E 70 021503
70. Schnurr B, Gittes F, MacKintosh F C and Schmidt C F 1997 Determining microscopic viscoelasticity in flexible and semiflexible polymer networks from thermal fluctuations Macromolecules 30 7781-92
71. Holmes K C, Popp D, Gebhard W and Kabsch W 1990 Atomic model of the actin filament Nature 347 44-9
72. Isambert H, Venier P, Maggs A C, Fattoum A, Kassab R, Pantaloni D and Carlier M F 1995 Flexibility of actin-filaments derived from thermal fluctuations-effect of bound nucleotide, phalloidin and muscle regulatory proteins J. Biol. Chem. 270 11437-44
73. Gittes F, Mickey B, Nettleton J and Howard J 1993 Flexural rigidity of microtubules and actin-filaments measured from thermal fluctuations in shape J. Cell Biol. 120 923-34
74. Gotter R, Kroy K, Frey E, Barmann M and Sackmann E 1996 Dynamic light scattering from semidilute actin solutions: a study of hydrodynamic screening, filament bending stiffness and the effect of tropomyosin/troponin-binding Macromolecules 29 30-6
75. Mackintosh F C, Käs J and Janmey P A 1995 Elasticity of semiflexible biopolymer networks Phys. Rev. Lett. 75 4425-8
76. Farge E and Maggs A C 1993 Dynamic scattering from semiflexible polymers Macromolecules 26 5041-4
77. Morse D C 1998 Viscoelasticity of concentrated isotropic solutions of semiflexible polymers. 2. Linear response Macromolecules 31 7044-67
78. Everaers R, Julicher F, Ajdari A and Maggs A C 1999 Dynamic fluctuations of semiflexible filaments Phys. Rev. Lett. 82 3717-20
79. Liverpool T B and Maggs A C 2001 Dynamic scattering from semiflexible polymers Macromolecules 34 6064-73
80. Hiraiwa T and Ohta T 2009 Viscoelasticity of a single semi flexible polymer chain Macromolecules 42 7553-62
81. Obermayer B and Frey E 2009 Tension dynamics and viscoelasticity of extensible wormlike chains Phys. Rev. E 80 040801
82. Xu J Y, Viasnoff V and Wirtz D 1998 Compliance of actin filament networks measured by particle-tracking microrheology and diffusing wave spectroscopy Rheol. Acta 37 387-98