Emergence of NDM-5- and MCR-1-producing Escherichia coli clones ST648 and ST156 from a single Muscovy duck (Cairina moschata)

Antimicrobial Agents and Chemotherapy

Volumn 60, Issue 11, 2016, Pages 6899-6902

  Yang, Run Shi ^a   Feng, Youjun ^b   Lv, Xiao Yue ^a   Duan, Jia Hong ^a   Chen, Jing ^a   Fang, Liang Xing ^a   Xia, Jing ^a   Liao, Xiao Ping ^a   Sun, Jian ^a   Liu, Ya Hong ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

^b ZHEJIANG UNIVERSITY SCHOOL OF MEDICINE   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CARBAPENEM; COLISTIN; FOSFOMYCIN; MEROPENEM; STREPTOMYCIN; BETA LACTAMASE; BETA LACTAMASE NDM-5, E COLI; ESCHERICHIA COLI PROTEIN; MCR-1 PROTEIN, E COLI;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM ISOLATE; CAIRINA MOSCHATA; ESCHERICHIA COLI; GENE; INTESTINE FLORA; MCR 1 GENE; MULTIDRUG RESISTANCE; NDM 5 GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL; ANIMAL; CHINA; DRUG EFFECTS; DUCK; GENETICS; ISOLATION AND PURIFICATION; MICROBIAL SENSITIVITY TEST; MICROBIOLOGY;

ANIMALS; BETA-LACTAMASES; CHINA; DRUG RESISTANCE, MULTIPLE, BACTERIAL; DUCKS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; MICROBIAL SENSITIVITY TESTS;

EID: 84994501781     PISSN: 00664804     EISSN: 10986596     Source Type: Journal    
DOI: 10.1128/AAC.01365-16     Document Type: Article

References (30)

1. NDM-1, and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Chemother 53:5046-5054. http://dx.doi.org/10.1128/AAC.00774-09.
2. NDM genetic contexts. Antimicrob Agents Chemother 60:136-141. http://dx.doi.org/10.1128/AAC.01243-15.
3. Sassi A, Loucif L, Gupta SK, Dekhil M, Chettibi H, Rolain J-M. 2014. NDM-5 carbapenemase-encoding gene in multidrug-resistant clinical isolates of Escherichia coli from Algeria. Antimicrob Agents Chemother 58:5606-5608. http://dx.doi.org/10.1128/AAC.02818-13.
4. Yousfi M, Mairi A, Bakour S, Touati A, Hassissen L, Hadjadj L, Rolain JM. 2015. First report of NDM-5-producing Escherichia coli ST1284 isolated from dog in Bejaia, Algeria. New Microbes New Infect 8:17-18. http://dx.doi.org/10.1016/j.nmni.2015.09.002.
5. Liu YY, Wang Y, Walsh TR, Yi LX, Zhang R, Spencer J, Doi Y, Tian G, Dong B, Huang X, Yu LF, Gu D, Ren H, Chen X, Lv L, He D, Zhou H, Liang Z, Liu JH, Shen J. 2016. Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study. Lancet Infect Dis 16:161-168. http://dx.doi.org/10.1016/S1473-3099(15)00424-7.
6. Du H, Chen L, Tang YW, Kreiswirth BN. 2016. Emergence of the mcr-1 colistin resistance gene in carbapenem-resistant Enterobacteriaceae. Lancet Infect Dis 16:287-288. http://dx.doi.org/10.1016/S1473-3099(16)00056-6.
7. Hasman H, Hammerum AM, Hansen F, Hendriksen RS, Olesen B, Agerso Y, Zankari E, Leekitcharoenphon P, Stegger M, Kaas RS, Cavaco LM, Hansen DS, Aarestrup FM, Skov RL. 2015. Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015. Euro Surveill 20:pii=21331. http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=21331.
8. Yao X, Doi Y, Zeng L, Lv L, Liu JH. 2016. Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and MCR-1. Lancet Infect Dis 16:288-289. http://dx.doi.org/10.1016/S1473-3099(16)00057-8.
9. Ye H, Li Y, Li Z, Gao R, Zhang H, Wen R, Gao GF, Hu Q, Feng Y. 2016. Diversified mcr-1-harbouring plasmid reservoirs confer resistance to colistin in human gut microbiota. mBio 7(2):e00177-16. http://dx.doi.org/10.1128/mBio.00177-16.
10. Gao R, Wang Q, Li P, Li Z, Feng Y. 2016. Genome sequence and characteristics of plasmid pWH12, a variant of the mcr-1-harbouring plasmid pHNSHP45, from the multi-drug resistant E. coli. Virulence 7:732-735. http://dx.doi.org/10.1080/21505594.2016.1193279.
11. Poirel L, Kieffer N, Liassine N, Thanh D, Nordmann P. 2016. Plasmid-mediated carbapenem and colistin resistance in a clinical isolate of Escherichia coli. Lancet Infect Dis 16:281. http://dx.doi.org/10.1016/S1473-3099(16)00006-2.
12. Yu H, Qu F, Shan B, Huang B, Jia W, Chen C, Li A, Miao M, Zhang X, Bao C, Xu Y, Chavda KD, Tang YW, Kreiswirth BN, Du H, Chen L. 2016. Detection of mcr-1 colistin resistance gene in carbapenem-resistant Enterobacteriaceae (CRE) from different hospitals in China. Antimicrob Agents Chemother http://dx.doi.org/10.1128/AAC.00440-16.
13. Falgenhauer L, Waersada SE, Yao YC, Imirzalioglu C, Kasbohrer A, Roesler U, Michael GB, Schwarz S, Werner G, Kreienbrock L, Chakraborty T, RESET Consortium. 2016. Colistin resistance gene mcr-1 in extended-spectrum beta-lactamase-producing and carbapenemase-producing Gram-negative bacteria in Germany. Lancet Infect Dis 16:282-283. http://dx.doi.org/10.1016/S1473-3099(16)00009-8.
14. Clinical and Laboratory Standards Institute. 2012. Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; approved standard, 9th ed. CLSI document M7-A9. Clinical and Laboratory Standards Institute, Wayne, PA.
15. Clinical and Laboratory Standards Institute. 2015. Performance standards for antimicrobial susceptibility testing; 25th informational supplement. CLSI document M100-S25. Clinical and Laboratory Standards Institute, Wayne, PA. http://www.ssu.ac.ir/cms/fileadmin/user-upload/Moavenatha/MDarman/omuor-azmayeshgahha/CLSI-2015.pdf.
16. EUCAST. 2015. Breakpoint tables for interpretation of MICs and zone diameters. European Committee on Antimicrobial Susceptibility Testing, Växjö, Sweden. http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST-files/Breakpoint-tables/v-5.0-Breakpoint-Table-01.pdf.
17. NDM-1-positive Enterobacteriaceae. Antimicrob Agents Chemother 55:5403-5407. http://dx.doi.org/10.1128/AAC.00585-11.
18. Tenover FC, Arbeit RD, Goering RV, Mickelsen PA, Murray BE, Persing DH, Swaminathan B. 1995. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33:2233-2239.
19. Wirth T, Falush D, Lan R, Colles F, Mensa P, Wieler LH, Karch H, Reeves PR, Maiden MC, Ochman H, Achtman M. 2006. Sex and virulence in Escherichia coli: an evolutionary perspective. Mol Microbiol 60:1136-1151. http://dx.doi.org/10.1111/j.1365-2958.2006.05172.x.
20. Barton BM, Harding GP, Zuccarelli AJ. 1995. A general method for detecting and sizing large plasmids. Anal Biochem 226:235-240. http://dx.doi.org/10.1006/abio.1995.1220.
21. NDM gene. Indian J Med Microbiol 33:30-38. http://dx.doi.org/10.4103/0255-0857.148373.
22. CTX-M on a novel IncF plasmid: first report of mcr-1 in the United States. Antimicrob Agents Chemother 60:4420-4421. http://dx.doi.org/10.1128/AAC.01103-16.
23. Zhi C, Lv L, Yu LF, Doi Y, Liu JH. 2016. Dissemination of the mcr-1 colistin resistance gene. Lancet Infect Dis 16:292-293. http://dx.doi.org/10.1016/S1473-3099(16)00063-3.
24. Ewers C, Bethe A, Stamm I, Grobbel M, Kopp PA, Guerra B, Stubbe M, Doi Y, Zong Z, Kola A, Schaufler K, Semmler T, Fruth A, Wieler LH, Guenther S. 2014. CTX-M-15-D-ST648 Escherichia coli from companion animals and horses: another pandemic clone combining multiresistance and extraintestinal virulence? J Antimicrob Chemother 69:1224-1230. http://dx.doi.org/10.1093/jac/dkt516.
25. Gao R, Li Y, Lin J, Tan C, Feng Y. 2016. Unexpected complexity of multidrug resistance in the mcr-1-harbouring Escherichia coli. Sci China Life Sci 59:732-734. http://dx.doi.org/10.1007/s11427-016-5070-1.
26. Kim YA, Qureshi ZA, Adams-Haduch JM, Park YS, Shutt KA, Doi Y. 2012. Features of infections due to Klebsiella pneumoniae carbapenemase-producing Escherichia coli: emergence of sequence type 131. Clin Infect Dis 55:224-231. http://dx.doi.org/10.1093/cid/cis387.
27. Mushtaq S, Irfan S, Sarma JB, Doumith M, Pike R, Pitout J, Livermore DM, Woodford N. 2011. Phylogenetic diversity of Escherichia coli strains producing NDM-type carbapenemases. J Antimicrob Chemother 66:2002-2005. http://dx.doi.org/10.1093/jac/dkr226.
28. Zhang H, Seward CH, Wu Z, Ye H, Feng Y. 2016. Genomic insights into the ESBL and MCR-1-producing ST648 Escherichia coli with multi-drug resistance. Sci Bull 61:875-878. http://dx.doi.org/10.1007/s11434-016-1086-y.
29. Giufrè M, Graziani C, Accogli M, Luzzi I, Busani L, Cerquetti M, Escherichia coli Study Group. 2012. Escherichia coli of human and avian origin: detection of clonal groups associated with fluoroquinolone and multidrug resistance in Italy. J Antimicrob Chemother 67:860-867. http://dx.doi.org/10.1093/jac/dkr565.
30. Gales AC, Jones RN, Sader HS. 2011. Contemporary activity of colistin and polymyxin B against a worldwide collection of Gram-negative pathogens: results from the SENTRY Antimicrobial Surveillance Program (2006-09). J Antimicrob Chemother 66:2070-2074. http://dx.doi.org/10.1093/jac/dkr239.