-
2
-
-
52049123852
-
Estimation of 2Nes from temporal allele frequency data
-
Bollback JP, York TL, Nielsen R. 2008. Estimation of 2Nes from temporal allele frequency data. Genetics 179:497-502.
-
(2008)
Genetics
, vol.179
, pp. 497-502
-
-
Bollback, J.P.1
York, T.L.2
Nielsen, R.3
-
3
-
-
0037159043
-
Procedures for reliable estimation of viral fitness from time-series data
-
Bonhoeffer S, Barbour AD, De Boer RJ. 2002. Procedures for reliable estimation of viral fitness from time-series data. Proc R Soc Lond B 269:1887-1893.
-
(2002)
Proc R Soc Lond B
, vol.269
, pp. 1887-1893
-
-
Bonhoeffer, S.1
Barbour, A.D.2
De Boer, R.J.3
-
4
-
-
84966194120
-
Changes in gene-frequency in Cepaea nemoralis (L.): The estimation of selective values
-
Clarke B, Murray J. 1962. Changes in gene-frequency in Cepaea nemoralis (L.): the estimation of selective values. Heredity 17:467-476.
-
(1962)
Heredity
, vol.17
, pp. 467-476
-
-
Clarke, B.1
Murray, J.2
-
5
-
-
0030472532
-
The medionigra gene in the moth Panaxia dominula: The case for selection
-
Cook LM, Jones DA. 1996. The medionigra gene in the moth Panaxia dominula: the case for selection. Phil Trans R Soc Lond B. 351:1623-1634.
-
(1996)
Phil Trans R Soc Lond B
, vol.351
, pp. 1623-1634
-
-
Cook, L.M.1
Jones, D.A.2
-
6
-
-
0032921585
-
Change in morph frequency in the snail Cepaea nemoralis on the Marlborough Downs
-
Cook LM, Cowie RH, Jones JS. 1999. Change in morph frequency in the snail Cepaea nemoralis on the Marlborough Downs. Heredity 82:336-342.
-
(1999)
Heredity
, vol.82
, pp. 336-342
-
-
Cook, L.M.1
Cowie, R.H.2
Jones, J.S.3
-
7
-
-
26644450279
-
Melanic moth frequencies in Yorkshire, an old English industrial hot spot
-
Cook LM, Sutton SL, Crawford TJ. 2005. Melanic moth frequencies in Yorkshire, an old English industrial hot spot. J Hered. 96:522-528.
-
(2005)
J Hered
, vol.96
, pp. 522-528
-
-
Cook, L.M.1
Sutton, S.L.2
Crawford, T.J.3
-
9
-
-
3242835094
-
Numerical results and diffusion approximations in a genetic process
-
Ewens WJ. 1963. Numerical results and diffusion approximations in a genetic process. Biometrika 50:241-249.
-
(1963)
Biometrika
, vol.50
, pp. 241-249
-
-
Ewens, W.J.1
-
11
-
-
84901333936
-
Identifying signatures of selection in genetic time series
-
Feder AF, Kryazhimskiy S, Plotkin JB. 2014. Identifying signatures of selection in genetic time series. Genetics 196:509-522.
-
(2014)
Genetics
, vol.196
, pp. 509-522
-
-
Feder, A.F.1
Kryazhimskiy, S.2
Plotkin, J.B.3
-
12
-
-
0017270331
-
The theoretical population genetics of variable selection and migration
-
Felsenstein J. 1976. The theoretical population genetics of variable selection and migration. Annu Rev Genet. 10:253-280.
-
(1976)
Annu Rev Genet
, vol.10
, pp. 253-280
-
-
Felsenstein, J.1
-
14
-
-
0001077472
-
On the dominance ratio
-
Fisher RA. 1922. On the dominance ratio. Proc R Soc Edin. 42:321-341.
-
(1922)
Proc R Soc Edin
, vol.42
, pp. 321-341
-
-
Fisher, R.A.1
-
16
-
-
84923108157
-
WFABC: A Wright-Fisher ABC-based approach for inferring effective population sizes and selection coefficients from time-sampled data
-
Foll M, Shim H, Jensen JD. 2015. WFABC: a Wright-Fisher ABC-based approach for inferring effective population sizes and selection coefficients from time-sampled data. Mol Ecol Resour. 15:87-98.
-
(2015)
Mol Ecol Resour
, vol.15
, pp. 87-98
-
-
Foll, M.1
Shim, H.2
Jensen, J.D.3
-
17
-
-
84855461111
-
3: Method, questions, and prospects
-
3: method, questions, and prospects. Genetics 190(1):175-186.
-
(2012)
Genetics
, vol.190
, Issue.1
, pp. 175-186
-
-
Gallet, R.1
Cooper, T.F.2
Elena, S.F.3
Lenormand, T.4
-
19
-
-
0030011523
-
Human Immunodeficiency Virus fitness in vivo: Calculations based on a single zidovudine resistance mutation at codon 215 of reverse transcriptase
-
Goudsmit J, De Ronde A, Ho DD, Perelson AS. 1996. Human Immunodeficiency Virus fitness in vivo: calculations based on a single zidovudine resistance mutation at codon 215 of reverse transcriptase. J Virol. 70:5662-5664.
-
(1996)
J Virol
, vol.70
, pp. 5662-5664
-
-
Goudsmit, J.1
De Ronde, A.2
Ho, D.D.3
Perelson, A.S.4
-
20
-
-
84955349191
-
A mathematical theory of natural and artificial selection, Part V: Selection and mutation
-
HaldaneJBS. 1927. A mathematical theory of natural and artificial selection, Part V: selection and mutation. Math Proc Cambridge. 23:838-844.
-
(1927)
Math Proc Cambridge
, vol.23
, pp. 838-844
-
-
Haldane, J.B.S.1
-
21
-
-
0031958266
-
Relative replicative fitness of zidovudine-resistant Human Immunodeficiency Virus Type 1 isolates in vitro
-
Harrigan PR, Bloor S, Larder BA 1998. Relative replicative fitness of zidovudine-resistant Human Immunodeficiency Virus Type 1 isolates in vitro. J Virol. 72:3773-3778.
-
(1998)
J Virol
, vol.72
, pp. 3773-3778
-
-
Harrigan, P.R.1
Bloor, S.2
Larder, B.A.3
-
23
-
-
0035319755
-
Fitness consequences of malathion-specific resistance in Red Flour Beetle (Coleoptera: Tenebrionidae) and selection for resistance in the absence of malathion
-
Haubruge E, Arnaud L 2001. Fitness consequences of malathion-specific resistance in Red Flour Beetle (Coleoptera: Tenebrionidae) and selection for resistance in the absence of malathion. J Econ Entomol. 94(2)552-557.
-
(2001)
J Econ Entomol
, vol.94
, Issue.2
, pp. 552-557
-
-
Haubruge, E.1
Arnaud, L.2
-
25
-
-
84858419168
-
Quantifying selection acting on a complex trait using allele frequency time series data
-
Illingworth CJR, Parts L, Schiffels S, Liti G, Mustonen V 2012. Quantifying selection acting on a complex trait using allele frequency time series data. Mol Biol Evol. 29:1187-1197.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 1187-1197
-
-
Illingworth, C.J.R.1
Parts, L.2
Schiffels, S.3
Liti, G.4
Mustonen, V.5
-
27
-
-
85013082995
-
Efficient computation of the joint sample frequency spectra for multiple populations
-
Kamm JA, Terhorst J, Song YSS. 2016. Efficient computation of the joint sample frequency spectra for multiple populations.J Comput Graph Stat. http://dxdoi.org/10.1080/10618600.2016.1159212.
-
(2016)
J Comput Graph Stat
-
-
Kamm, J.A.1
Terhorst, J.2
Song, Y.S.S.3
-
29
-
-
67849109961
-
Resistance gene replacement in the mosquito Culex pipiens: Fitness estimation from long-term cline series
-
Labbe P, Sidos N, Raymond M, Lenormand T. 2009. Resistance gene replacement in the mosquito Culex pipiens: fitness estimation from long-term cline series. Genetics 182:303-312.
-
(2009)
Genetics
, vol.182
, pp. 303-312
-
-
Labbe, P.1
Sidos, N.2
Raymond, M.3
Lenormand, T.4
-
30
-
-
84908610686
-
Population genetics inference for longitudinally-sampled mutants under strong selection
-
Lacerda M, Seoighe C 2014. Population genetics inference for longitudinally-sampled mutants under strong selection. Genetics 198:1237-1250.
-
(2014)
Genetics
, vol.198
, pp. 1237-1250
-
-
Lacerda, M.1
Seoighe, C.2
-
31
-
-
0000114798
-
The consequences of fluctuating selection for isozyme polymorphisms in daphnia
-
Lynch M. 1987. The consequences of fluctuating selection for isozyme polymorphisms in daphnia. Genetics 115:657-669.
-
(1987)
Genetics
, vol.115
, pp. 657-669
-
-
Lynch, M.1
-
32
-
-
84867176367
-
Estimating allele age and selection coefficient from time-serial data
-
Malaspinas A Malaspinas O, Evans SN, Slatkin M. 2012. Estimating allele age and selection coefficient from time-serial data. Genetics 192:599-607.
-
(2012)
Genetics
, vol.192
, pp. 599-607
-
-
Malaspinas, A.1
Malaspinas, O.2
Evans, S.N.3
Slatkin, M.4
-
34
-
-
84876432800
-
Estimating selection coefficients in spatially structured populations from time series data of allele frequencies
-
Mathieson I, McVean G. 2013. Estimating selection coefficients in spatially structured populations from time series data of allele frequencies. Genetics 193:973-984.
-
(2013)
Genetics
, vol.193
, pp. 973-984
-
-
Mathieson, I.1
McVean, G.2
-
35
-
-
84890822690
-
Detecting selection using time-series data of allele frequencies with multiple independent reference loci
-
Nishino J. 2013. Detecting selection using time-series data of allele frequencies with multiple independent reference loci. G3 3:2151-2161.
-
(2013)
G3
, vol.3
, pp. 2151-2161
-
-
Nishino, J.1
-
36
-
-
16844374692
-
Comparing the effects of genetic drift and fluctuating selection on genotype frequency changes in the scarlet tiger moth
-
O'Hara RB. 2005. Comparing the effects of genetic drift and fluctuating selection on genotype frequency changes in the scarlet tiger moth. Proc Roy Soc Lond B. 272:211-217.
-
(2005)
Proc Roy Soc Lond B
, vol.272
, pp. 211-217
-
-
O'Hara, R.B.1
-
37
-
-
0024610919
-
A tutorial on Hidden Markov Models and selected applications in speech recognition
-
Rabiner LR. 1989. A tutorial on Hidden Markov Models and selected applications in speech recognition. Proc IEEE. 77:257-286.
-
(1989)
Proc IEEE
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
38
-
-
0036961536
-
Temporal variation in divergent selection on spine number in Threespine Stickleback
-
Reimchen TE, Nosil P. 2002. Temporal variation in divergent selection on spine number in Threespine Stickleback. Evolution 56:2472-2483.
-
(2002)
Evolution
, vol.56
, pp. 2472-2483
-
-
Reimchen, T.E.1
Nosil, P.2
-
39
-
-
0035102156
-
Transition between stochastic evolution and deterministic evolution in the presence of selection: General theory and application to virology
-
Rouzine IM, Rodrigo A, Coffin JM. 2001. Transition between stochastic evolution and deterministic evolution in the presence of selection: general theory and application to virology. Microbiol Mol Biol R. 65:151-185.
-
(2001)
Microbiol Mol Biol R
, vol.65
, pp. 151-185
-
-
Rouzine, I.M.1
Rodrigo, A.2
Coffin, J.M.3
-
40
-
-
0017740177
-
Drift or selection: A statistical test of gene frequency variation over generations
-
Schaffer HE, Yardley D, Anderson WW. 1977. Drift or selection: a statistical test of gene frequency variation over generations. Genetics 87:371-379.
-
(1977)
Genetics
, vol.87
, pp. 371-379
-
-
Schaffer, H.E.1
Yardley, D.2
Anderson, W.W.3
-
41
-
-
84979891829
-
Bayesian inference of natural selection from allele frequency time series
-
Schraiber JG, Evans SN, Slatkin M. 2016. Bayesian inference of natural selection from allele frequency time series. Genetics 203:493-511.
-
(2016)
Genetics
, vol.203
, pp. 493-511
-
-
Schraiber, J.G.1
Evans, S.N.2
Slatkin, M.3
-
42
-
-
70350043770
-
Its about time: The temporal dynamics of phenotypic selection in the wild
-
Siepielski AM, DiBattista JD, Carlson SM. 2009. Its about time: the temporal dynamics of phenotypic selection in the wild. Ecol Lett. 12(11):1261-1276.
-
(2009)
Ecol Lett
, vol.12
, Issue.11
, pp. 1261-1276
-
-
Siepielski, A.M.1
DiBattista, J.D.2
Carlson, S.M.3
-
43
-
-
84863235001
-
A simple method for finding explicit analytic transition densities of diffusion processes with general dip-loid selection
-
Song YS, Steinrücken M. 2012. A simple method for finding explicit analytic transition densities of diffusion processes with general dip-loid selection. Genetics 190(3):1117-1129.
-
(2012)
Genetics
, vol.190
, Issue.3
, pp. 1117-1129
-
-
Song, Y.S.1
Steinrücken, M.2
-
44
-
-
84919443718
-
A novel spectral method for inferring general diploid selection from time series genetic data
-
Steinrücken M, Bhaskar A, Song YS. 2014. A novel spectral method for inferring general diploid selection from time series genetic data. Ann Appl Stat. 8(4):2203-2222.
-
(2014)
Ann Appl Stat
, vol.8
, Issue.4
, pp. 2203-2222
-
-
Steinrücken, M.1
Bhaskar, A.2
Song, Y.S.3
-
45
-
-
84960128167
-
Spectraltdf: Transition densities of diffusion processes with time-varying selection parameters, mutation rates and effective population sizes
-
Steinrücken M, Jewett EM, Song YS. 2015. Spectraltdf: transition densities of diffusion processes with time-varying selection parameters, mutation rates and effective population sizes. Bioinformatics 32(5):795-797.
-
(2015)
Bioinformatics
, vol.32
, Issue.5
, pp. 795-797
-
-
Steinrücken, M.1
Jewett, E.M.2
Song, Y.S.3
-
46
-
-
0025337866
-
The estimation of selection coefficients in afrikaners: Huntington disease, porphyria variegata, and lipoid pro-teinosis
-
Stine OC, Smith KD. 1990. The estimation of selection coefficients in afrikaners: Huntington disease, porphyria variegata, and lipoid pro-teinosis. Am J Hum Genet. 46:452-458.
-
(1990)
Am J Hum Genet
, vol.46
, pp. 452-458
-
-
Stine, O.C.1
Smith, K.D.2
-
48
-
-
84982052884
-
Temporal changes of gene frequencies in cepaea hortensis
-
Wall S, Carter MA, Clarke B. 1980. Temporal changes of gene frequencies in cepaea hortensis. Biol J Linn Soc. 14(3-4):303-317.
-
(1980)
Biol J Linn Soc
, vol.14
, Issue.3-4
, pp. 303-317
-
-
Wall, S.1
Carter, M.A.2
Clarke, B.3
-
49
-
-
0016491430
-
On the number of segregating sites in genetic models without recombination
-
Watterson G. 1975. On the number of segregating sites in genetic models without recombination. Theor Popul Biol. 7:256-276.
-
(1975)
Theor Popul Biol
, vol.7
, pp. 256-276
-
-
Watterson, G.1
-
50
-
-
0019142754
-
Analyzing gene-frequency data when the effective population size is finite
-
Wilson SR. 1980. Analyzing gene-frequency data when the effective population size is finite. Genetics 95:489-502.
-
(1980)
Genetics
, vol.95
, pp. 489-502
-
-
Wilson, S.R.1
-
51
-
-
84907515717
-
Exact simulation of conditioned wright-fisher models
-
Zhao L, Lascoux M, Waxman D. 2014. Exact simulation of conditioned wright-fisher models. J Theor Biol. 363:419-426.
-
(2014)
J Theor Biol
, vol.363
, pp. 419-426
-
-
Zhao, L.1
Lascoux, M.2
Waxman, D.3
|