Analyzing genetic diversity for virulence and resistance phenotypes in populations of stem rust (Puccinia graminis f. sp. secalis) and winter rye (Secale cereale)

Phytopathology

Volumn 106, Issue 11, 2016, Pages 1335-1343

  Miedaner, Thomas ^a   Schmitt, Ann Kristin ^b   Klocke, Bettina ^b   Schmiedchen, Brigitta ^c   Wilde, Peer ^c   Spieß, Hartmut ^d   Szabo, Lilla ^d   Koch, Silvia ^a   Flath, Kerstin ^b  

^a UNIVERSITY OF HOHENHEIM   (Germany)

^b INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^c KWS LOCHOW GmbH   (Germany)

^d Landbauschule Dottenfelderhof eV   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BASIDIOMYCETES; DISEASE RESISTANCE; GENETIC VARIATION; GENETICS; IMMUNOLOGY; MICROBIOLOGY; PATHOGENICITY; PHENOTYPE; PLANT DISEASE; PLANT LEAF; PLANT STEM; SECALE; VIRULENCE;

BASIDIOMYCOTA; DISEASE RESISTANCE; GENETIC VARIATION; PHENOTYPE; PLANT DISEASES; PLANT LEAVES; PLANT STEMS; SECALE; VIRULENCE;

EID: 84994037012     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-10-15-0252-R     Document Type: Article

References (48)

1. Acquaah, G. 2012. Principles of Plant Genetics and Breeding, 2nd Ed. John Wiley & Sons, New York.
2. BAES. 2015. Österreichische Beschreibende Sortenliste. Published online. http://www.baes.gv.at/pflanzensorten/oesterreichische-beschreibende-sortenliste/getreide/winterroggen/
3. Berlin, A., Djurle, A., Samils, B., and Yuen, J. 2012. Genetic variation in Puccinia graminis collected from oats, rye, and barberry. Phytopathology 102:1006-1012.
4. Brown, J. K. M. 2015. Durable resistance of crops to diseases: A Darwinian perspective. Annu. Rev. Phytopathol. 53:513-539.
5. Cochran, W. G., and Cox, G. M. 1957. Experimental Design, 2nd Ed. John Wiley & Sons, New York.
6. FAO. 2016. Crops. Production. Published online. http://faostat3.fao.org/download/Q/QC/E
7. Fehr, W. R. 1987. Principles of Cultivar Development. Vol. 1. Theory and Technique. Macmillan, New York.
8. Felsenstein, F. G., and Jaser, B. 2000. Effectiveness of vertical (qualitative) resistance to powdery mildew in wheat and barley. Report 2000. [In German]. Freising, EpiLogic GmbH. Published online. http://www.epilogic.de/BL%202000%20Bericht%20farbig%20hoch.htm
9. Flor, H. H. 1971. Current status of the gene-for-gene concept. Annu. Rev. Phytopathol. 9:275-296.
10. Geiger, H. H., and Miedaner, T. 2009. Rye breeding. Pages 157-181 in: Cereals (Handbook of Plant Breeding), 1st Ed. M. J. Carena, ed. Springer + Business Media LLC, New York.
11. Goyeau, H., Halkett, F., Zapater, M.-F., Carlier, J., and Lannou, C. 2007. Clonality and host selection in the wheat pathogenic fungus Puccinia triticina. Fungal Genet. Biol. 44:474-483.
12. Hale, I. 2012. Going to the Source of New Virulence: Isolating Cereal Rust Pathogens from Barberry Species. A training video that teaches the basics of collecting and processing rust samples from the alternate host. Barberry. Borlaug Global Rust Initiative. Published online. https://www.youtube.com/watch?v=dEoTezovM-Q
13. Hare, R. A., and McIntosh, R. A. 1979. Genetic and cytogenetic studies of durable adult-plant resistances in Hope and related cultivars to wheat rusts. Z. Pflanzenzucht. 83:350-367.
14. Hovmøller, M. S., Walter, S., Bayles, R., Hubbard, A., Flath, K., Sommerfeldt, N., Leconte, M., Czembor, P., Rodriguez-Algaba, J., Thach, T., Hansen, J. G., Lassen, P., Justesen, A. F., Ali, S., and de Vallavieille-Pope, C. 2015. Replacement of the European wheat yellow rust population by new races from the center of diversity in the near-Himalayan region. Plant Pathol. 65:402-411.
15. Jin, Y. 2011. Role of Berberis spp. as alternate hosts in generating new races of Puccinia graminis and P. striiformis. Euphytica 179:105-108.
16. Knott, D. R. 1982. Multigenic inheritance of stem rust resistance in wheat. Crop Sci. 22:393-399.
17. Kolmer, J. A. 2013. Leaf rust of wheat: Pathogen biology, variation and host resistance. Forests 4:70-84.
18. Kolmer, J. A., Hanzalova, A., Goyeau, H., Bayles, R., and Morgounov, A. 2013. Genetic differentiation of the wheat leaf rust fungus Puccinia triticina in Europe. Plant Pathol. 62:21-31.
19. Körber-Grohne, U. 1987. Nutzpflanzen in Deutschland. Kulturgeschichte und Biologie. K. Theiss, Stuttgart, Germany.
20. Luig, N. H., and Watson, I. A. 1976. The role of barley, rye and grasses in the 1973-74 wheat stem rust epiphytotic in southern and eastern Australia. Proc. Linn. Soc. N. S. W. 101:65-76.
21. Mago, R., Miah, H., Lawrence, G. J., Wellings, C. R., Spielmeyer, W., Bariana, H. S., McIntosh, R. A., Pryor, A. J., and Ellis, J. G. 2005. High-resolution mapping and mutation analysis separate the rust resistance genes Sr31, Lr26 and Yr9 on the short arm of rye chromosome 1. Theor. Appl. Genet. 112:41-50.
22. Mains, E. B. 1926. Studies in rust resistance. J. Hered. 17:313-325.
23. Marshall, D. R., and Pryor, A. J. 1978. Multiline varieties and disease control: I. The "dirty crop" approach with each component carrying a unique single resistance gene. Theor. Appl. Genet. 51:177-184.
24. McDonald, B. A., and Linde, C. C. 2002. Pathogen population genetics, evolutionary potential, and durable resistance. Annu. Rev. Phytopathol. 40:349-379.
25. Mesterházy, A., Bartoš, P., Goyeau, H., Niks, R. E., Csösz, M., Andersen, O., Casulli, F., Ittu, M., Jones, E., Manisterski, J., Manninger, K., Pasquini, M., Rubiales, D., Schachermayr, G., Strzembicka, A., Szunics, L., Todorova, M., Unger, O., Vanco, B., Vida, G., and Walther, U. 2000. European virulence survey for leaf rust in wheat. Agronomie 20:793-804.
26. Miedaner, T. 2016. Breeding strategies for improving plant resistance to diseases. In: Advances in Plant Breeding Strategies. Volume 2: Agronomic, Abiotic and Biotic Stress Traits. J. M. Al-Khayri, S. M. Jain, and D. V. Johnson, eds. Springer Science + Business Media LLC, New York.
27. Miedaner, T., Klocke, B., Flath, K., Geiger, H. H., and Weber, W. E. 2012. Diversity, spatial variation, and temporal dynamics of virulences in the German leaf rust (Puccinia recondita f. sp. secalis) population in winter rye. Eur. J. Plant Pathol. 132:23-35.
28. Mirdita, V., Dhillon, B. S., Geiger, H. H., and Miedaner, T. 2008. Genetic variation for resistance to ergot (Claviceps purpurea [Fr.] Tul.) among full-sib families of winter rye (Secale cereale L.). Theor. Appl. Genet. 118:85-90.
29. Müller, K., McDermott, J. M., Wolfe, M. S., and Limpert, E. 1996. Analysis of diversity in populations of plant pathogens: The barley powdery mildew pathogen across Europe. Eur. J. Plant Pathol. 102:385-395.
30. Obst, A., and Gehring, K. 2004. Getreide-Krankheiten, Schädlinge, Unkräuter. Agroconcept, Bonn, Germany.
31. Park, R. F., and Felsenstein, F. G. 1998. Physiological specialisation and pathotype distribution of Puccinia recondita in Western Europe in 1995. Plant Pathol. 47:157-164.
32. Purnhauser, L., Bóna, L., and Láng, L. 2011. Occurrence of 1BL.1RS wheat-rye chromosome translocation and of Sr36/Pm6 resistance gene cluster in wheat cultivars registered in Hungary. Euphytica 179:287-295.
33. Roelfs, A. P., and Groth, J. V. 1980. A comparison of virulence phenotypes in wheat stem rust populations reproducing sexually and asexually. Phytopathology 70:855-862.
34. Rutkoski, J. E., Heffner, E. L., and Sorrells, M. E. 2011. Genomic selection for durable stem rust resistance in wheat. Euphytica 179:161-173.
35. Schnell, F. W. 1982. A synoptic study of the methods and categories of plant breeding. Z Pflanzenzuchtung 89:1-18.
36. Sencer, H. A., and Hawkes, J. G. 1980. On the origin of cultivated rye. Biol. J. Linn. Soc. 13:299-313.
37. Singh, N. K., Shepherd, K. W., and McIntosh, R. A. 1994. Linkage mapping of genes for resistance to leaf, stem and stripe rusts and ω-secalins on the short arm of rye chromosome 1R. Theor. Appl. Genet. 80:609-616.
38. Singh, R. P., Hodson, D. P., Huerta-Espino, J., Jin, Y., Bhavani, S., Njau, P., Herrera-Foessel, S., Singh, P. K., Singh, S., and Govindan, V. 2011. The emergence of Ug99 races of the stem rust fungus is a threat to world wheat production. Annu. Rev. Phytopathol. 49:465-481.
39. Solodukhina, O. V., and Kobylyansky, V. D. 2000. Genetic determination of stem-rust resistance in rye. Russ. J. Genet. 36:550-552.
40. Solodukhina, O. V., and Kobylyansky, V. D. 2007. Possibility of rye breeding for long-term resistance to leaf and stem rusts. Proc. Int. Symp. on Rye Breeding & Genetics. Vortr. Pflanzenzücht. 71:151-157.
41. Stakmann, E. C., Stewart, D. M., and Lögering, W. Q. 1962. Identification of physiologic races of Puccinia graminis var. tritici. Agric. Res. Ser. E617. U.S. Department of Agriculture, Washington, DC.
42. Stuthman, D. D., Leonard, K. J., and Miller-Garvin, J. 2007. Breeding crops for durable resistance to disease. Adv. Agron. 95:319-367.
43. Sun, Y., and Steffenson, B. J. 2005. Reaction of barley seedlings with different stem rust resistance genes to Puccinia graminis f. sp. tritici and Puccinia graminis f. sp. secalis. Can. J. Plant Pathol. 27:80-89.
44. Tan, B. H., Luig, N. H., and Watson, I. A. 1976. Genetic analysis of stem rust resistance in Secale cereale. I. Genes for resistance to Puccinia graminis f. sp. secalis. Z. Pflanzenzucht. 76:121-132.
45. Utz, H. F. 2015. PLABSTAT, Version 3C-tag. A Computer Program for Statistical Analysis of Plant Breeding Experiments. Institute of Plant Breeding, Population Genetics, Seed Science, Univ. Hohenheim, Stuttgart, Germany.
46. Welz, G. 1986. Structure and dynamics of virulences in populations of Erysiphe graminis f. sp. hordei Marchal. [In German]. Ph.D. thesis. University of Gießen, Germany.
47. Wilde, K., Geiger, H. H., and Miedaner, T. 2006. Significance of host complexity and diversity for race-specific leaf-rust resistance in self-fertile synthetic rye populations. Plant Breed. 125:225-230.
48. Wolfe, M. S., and Finckh, M. R. 1997. Diversity of host resistance within the crop: Effect on host, pathogen, and disease. Pages 378-400 in: Resistance of Crop Plants against Fungi. H. Hartleb, R. Heitefuss, and H. H. Hoppe, eds. G. Fischer, Jena, Germany.