Ecological conditions determine extinction risk in co-evolving bacteria-phage populations

BMC Evolutionary Biology

Volumn 16, Issue 1, 2016, Pages 1-6

  Wright, Rosanna C T ^a   Brockhurst, Michael A ^a   Harrison, Ellie ^a  

^a UNIVERSITY OF YORK   (United Kingdom)

Author keywords

Antagonistic coevolution; Bacteriophage; Experimental evolution; Extinction; Pseudomonas fluorescens; Species interaction

Indexed keywords

ABIOTIC FACTOR; ADAPTATION; ANTAGONISM; BACTERIOPHAGE; BACTERIUM; COEVOLUTION; EXTINCTION RISK; INTRASPECIFIC INTERACTION; RESOURCE AVAILABILITY;

BACTERIA (MICROORGANISMS); PSEUDOMONAS FLUORESCENS;

ECOLOGY; EVOLUTION; GENETICS; GENOTYPE; PHENOTYPE; PSEUDOMONAS FLUORESCENS; PSEUDOMONAS PHAGE; RISK FACTOR; SPECIES EXTINCTION; TIME FACTOR; VIROLOGY;

BIOLOGICAL EVOLUTION; ECOLOGY; EXTINCTION, BIOLOGICAL; GENOTYPE; PHENOTYPE; PSEUDOMONAS FLUORESCENS; PSEUDOMONAS PHAGES; RISK FACTORS; TIME FACTORS;

EID: 84992195235     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/s12862-016-0808-8     Document Type: Article

References (28)

1. Barraclough TG. How do species interactions affect evolutionary dynamics across whole communities? Annu Rev Ecol Evol Syst. 2015;46:25-48.
2. Van Valen L. A new evolutionary law. Evol Theor. 1973;1:1-30.
3. Koskella B, Brockhurst MA. Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities. FEMS Microbiol Rev. 2014;38:916-31.
4. Brockhurst MA, Chapman T, King KC, Mank JE, Paterson S, Hurst GDD. Running with the Red Queen: the role of biotic conflicts in evolution. Proc R Soc Lond B Biol Sci. 2014;281:20141382.
5. Lenski RE, Levin BR. Constraints on the coevolution of bacteria and virulent phage: a model, some experiments, and predictions for natural communities. Am Nat. 1985;125:585-602.
6. Levin BR, Antonovics J, Sharma H. Frequency-dependent selection in bacterial populations. Philos Trans R Soc B Biol Sci. 1988;319:459-72.
7. Smith JM. A comment on the Red Queen. Am Nat. 1976;110:325-30.
8. Rafaluk C, Gildenhard M, Mitschke A, Telschow A, Schulenburg H, Joop G. Rapid evolution of virulence leading to host extinction under host-parasite coevolution. BMC Evol Biol. 2015;15:112.
9. Zhang Q-G, Buckling A. Resource-dependent antagonistic coevolution leads to a new paradox of enrichment. Ecology. 2016;97:1319-28.
10. Gómez P, Buckling A. Bacteria-phage antagonistic coevolution in soil. Science. 2011;332:106-9.
11. Lopez Pascua L, Hall AR, Best A, Morgan AD, Boots M, Buckling A. Higher resources decrease fluctuating selection during host-parasite coevolution. Ecol Lett. 2014;17:1380-8.
12. Buckling A, Brockhurst M. Bacteria-virus coevolution. Adv Exp Med Biol. 2012;751:347-70.
13. Zhang Q-G, Buckling A. Antagonistic coevolution limits population persistence of a virus in a thermally deteriorating environment. Ecol Lett. 2011;14:282-8.
14. Gómez P, Bennie J, Gaston KJ, Buckling A. The impact of resource availability on bacterial resistance to phages in soil. PLoS One. 2015;10:e0123752.
15. Lopez-Pascua LDC, Buckling A. Increasing productivity accelerates host-parasite coevolution. J Evol Biol. 2008;21:853-60.
16. Scanlan PD, Hall AR, Blackshields G, Friman V-P, Davis MR, Goldberg JB, et al. Coevolution with bacteriophages drives genome-wide host evolution and constrains the acquisition of abiotic-beneficial mutations. Mol Biol Evol. 2015;32:1425-35.
17. Jessup CM, Forde SE. Ecology and evolution in microbial systems: the generation and maintenance of diversity in phage-host interactions. Res Microbiol. 2008;159:382-9.
18. Boots M. The evolution of resistance to a parasite is determined by resources. Am Nat. 2011;178:214-20.
19. Brockhurst MA, Morgan AD, Rainey PB, Buckling A. Population mixing accelerates coevolution. Ecol Lett. 2003;6:975-9.
20. Schrag SJ, Mittler JE. Host-parasite coexistence: the role of spatial refuges in stabilizing bacteria-phage interactions. Am Nat. 1996;148:348-77.
21. Brockhurst MA, Morgan AD, Fenton A, Buckling A. Experimental coevolution with bacteria and phage: the pseudomonas fluorescens - Φ2 model system. Infect Genet Evol. 2007;7:547-52.
22. Poullain V, Gandon S, Brockhurst MA, Buckling A, Hochberg ME. The evolution of specificity in evolving and coevolving antagonistic interactions between a bacteria and its phage. Evolution. 2008;62:1-11.
23. Gandon S, Michalakis Y. Local adaptation, evolutionary potential and host-parasite coevolution: interactions between migration, mutation, population size and generation time. J Evol Biol. 2002;15:451-62.
24. Samson JE, Magadán AH, Sabri M, Moineau S. Revenge of the phages: defeating bacterial defences. Nat Rev Microbiol. 2013;11:675-87.
25. Hesse E, Buckling A. Host population bottlenecks drive parasite extinction during antagonistic coevolution. Evolution. 2015;70:235-40.
26. Poisot T, Lepennetier G, Martinez E, Ramsayer J, Hochberg ME. Resource availability affects the structure of a natural bacteria-bacteriophage community. Biol Lett. 2011;7:201-4.
27. Brockhurst MA, Buckling A, Rainey PB. Spatial heterogeneity and the stability of host-parasite coexistence. J Evol Biol. 2006;19:374-9.
28. Heilmann S, Sneppen K, Krishna S. Coexistence of phage and bacteria on the boundary of self-organized refuges. Proc Natl Acad Sci. 2012;109:12828-33.