-
1
-
-
0033034612
-
The EMB506 gene encodes a novel ankyrin repeat containing protein that is essential for the normal development of Arabidopsis embryos
-
Albert S, Després B, Guilleminot J, Bechtold N, Pelletier G, Delseny M, Devic M. (1999). The EMB506 gene encodes a novel ankyrin repeat containing protein that is essential for the normal development of Arabidopsis embryos. The Plant Journal 17, 169-179
-
(1999)
The Plant Journal
, vol.17
, pp. 169-179
-
-
Albert, S.1
Després, B.2
Guilleminot, J.3
Bechtold, N.4
Pelletier, G.5
Delseny, M.6
Devic, M.7
-
2
-
-
77957592782
-
Polyembryony in nonapomictic citrus genotypes
-
Aleza P, Juarez J, Ollitrault P, Navarro L. (2010). Polyembryony in nonapomictic citrus genotypes. Annals of Botany 106, 533-545
-
(2010)
Annals of Botany
, vol.106
, pp. 533-545
-
-
Aleza, P.1
Juarez, J.2
Ollitrault, P.3
Navarro, L.4
-
3
-
-
80053649578
-
Analysis of conserved microRNAs in floral tissues of sexual and apomictic Boechera species
-
Amiteye S, Corral JM, Vogel H, Sharbel TF. (2011). Analysis of conserved microRNAs in floral tissues of sexual and apomictic Boechera species. BMC Genomics 12, 500
-
(2011)
BMC Genomics
, vol.12
, pp. 500
-
-
Amiteye, S.1
Corral, J.M.2
Vogel, H.3
Sharbel, T.F.4
-
4
-
-
3442876969
-
Normalization of real-Time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
Andersen CL, Jensen JL, Ørntoft TF. (2004). Normalization of real-Time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Research 64, 5245-5250
-
(2004)
Cancer Research
, vol.64
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Ørntoft, T.F.3
-
5
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel DP. (2004). MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116, 281-297
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
7
-
-
2942653309
-
Understanding apomixis: Recent advances and remaining conundrums
-
Bicknell RA, Koltunow AM. (2004). Understanding apomixis: recent advances and remaining conundrums. The Plant Cell 16, S228-S245
-
(2004)
The Plant Cell
, vol.16
, pp. S228-S245
-
-
Bicknell, R.A.1
Koltunow, A.M.2
-
8
-
-
84925507606
-
Stress induced acquisition of somatic embryogenesis in common bean Phaseolus vulgaris L
-
Cabrera-Ponce JL, López L, León-Ramírez CG, Jofre-Garfias AE, Verver-y-Vargas A. (2015). Stress induced acquisition of somatic embryogenesis in common bean Phaseolus vulgaris L. Protoplasma 252, 559-570
-
(2015)
Protoplasma
, vol.252
, pp. 559-570
-
-
Cabrera-Ponce, J.L.1
López, L.2
León-Ramírez, C.G.3
Jofre-Garfias, A.E.4
Verver, Y.5
Vargas, A.6
-
9
-
-
0030970301
-
Asynchronous expression of duplicate genes in angiosperms may cause apomixis, bispory, tetraspory, and polyembryony
-
Carman JG. (1997). Asynchronous expression of duplicate genes in angiosperms may cause apomixis, bispory, tetraspory, and polyembryony. Biological Journal of the Linnean Society 61, 51-94
-
(1997)
Biological Journal of the Linnean Society
, vol.61
, pp. 51-94
-
-
Carman, J.G.1
-
10
-
-
84950319792
-
Polyamine and its metabolite H2O2 play a key role in the conversion of embryogenic callus into somatic embryos in upland cotton (Gossypium hirsutum L
-
Cheng WH, Wang FL, Cheng XQ, Zhu QH, Sun YQ, Zhu HG, Sun J. (2015). Polyamine and its metabolite H2O2 play a key role in the conversion of embryogenic callus into somatic embryos in upland cotton (Gossypium hirsutum L.). Frontiers in Plant Science 6, 1063
-
(2015)
Frontiers in Plant Science
, vol.6
, pp. 1063
-
-
Cheng, W.H.1
Wang, F.L.2
Cheng, X.Q.3
Zhu, Q.H.4
Sun, Y.Q.5
Zhu, H.G.6
Sun, J.7
-
11
-
-
24644503098
-
Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M. (2005). Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3674-3676
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Götz, S.2
García-Gómez, J.M.3
Terol, J.4
Talón, M.5
Robles, M.6
-
12
-
-
79959967431
-
PsRNATarget: A plant small RNA target analysis server
-
Dai XB, Zhao PX. (2011). psRNATarget: a plant small RNA target analysis server. Nucleic Acids Research 39, W155-W159
-
(2011)
Nucleic Acids Research
, vol.39
, pp. W155-W159
-
-
Dai, X.B.1
Zhao, P.X.2
-
14
-
-
77954299992
-
AgriGO: A GO analysis toolkit for the agricultural community
-
Du Z, Zhou X, Ling Y, Zhang Z, Su Z. (2010). agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Research 38, W64-W70
-
(2010)
Nucleic Acids Research
, vol.38
, pp. W64-W70
-
-
Du, Z.1
Zhou, X.2
Ling, Y.3
Zhang, Z.4
Su, Z.5
-
15
-
-
85028153031
-
Somatic embryogenesis-stress-induced remodeling of plant cell fate
-
Fehér A. (2015). Somatic embryogenesis-stress-induced remodeling of plant cell fate. Biochimica et Biophysica Acta 1849, 385-402
-
(2015)
Biochimica et Biophysica Acta
, vol.1849
, pp. 385-402
-
-
Fehér, A.1
-
16
-
-
6344235643
-
Evaluation of haemoglobin (erythrogen): For improved somatic embryogenesis and plant regeneration in cotton (Gossypium hirsutum L cv SVPR 2)
-
Ganesan M, Jayabalan N. (2004). Evaluation of haemoglobin (erythrogen): for improved somatic embryogenesis and plant regeneration in cotton (Gossypium hirsutum L. cv. SVPR 2). Plant Cell Reports 23, 181-187
-
(2004)
Plant Cell Reports
, vol.23
, pp. 181-187
-
-
Ganesan, M.1
Jayabalan, N.2
-
17
-
-
0345062313
-
Genetic analysis of apomixis in Citrus and Poncirus by molecular markers
-
García R, Asíns M, Forner J, Carbonell EA. (1999). Genetic analysis of apomixis in Citrus and Poncirus by molecular markers. Theoretical and Applied Genetics 99, 511-518
-
(1999)
Theoretical and Applied Genetics
, vol.99
, pp. 511-518
-
-
García, R.1
Asíns, M.2
Forner, J.3
Carbonell, E.A.4
-
18
-
-
84871728961
-
A nuclear phylogenetic analysis: SNPs, indels and SSRs deliver new insights into the relationships in the ?True citrus fruit trees? Group (Citrinae, Rutaceae) and the origin of cultivated species
-
Garcia-Lor A, Curk F, Snoussi-Trifa H, Morillon R, Ancillo G, Luro F, Navarro L, Ollitrault P. (2013) A nuclear phylogenetic analysis: SNPs, indels and SSRs deliver new insights into the relationships in the ?true citrus fruit trees? group (Citrinae, Rutaceae) and the origin of cultivated species. Annals of Botany 111: 1-19
-
(2013)
Annals of Botany
, vol.111
, pp. 1-19
-
-
Garcia-Lor, A.1
Curk, F.2
Snoussi-Trifa, H.3
Morillon, R.4
Ancillo, G.5
Luro, F.6
Navarro, L.7
Ollitrault, P.8
-
19
-
-
84866900313
-
Transcriptional profiling of genes involved in embryogenic, nonembryogenic calluses and somatic embryogenesis of Valencia sweet orange by SSH-based microarray
-
Ge XX, Chai LJ, Liu Z, Wu XM, Deng XX, Guo WW. (2012). Transcriptional profiling of genes involved in embryogenic, nonembryogenic calluses and somatic embryogenesis of Valencia sweet orange by SSH-based microarray. Planta 236, 1107-1124
-
(2012)
Planta
, vol.236
, pp. 1107-1124
-
-
Ge, X.X.1
Chai, L.J.2
Liu, Z.3
Wu, X.M.4
Deng, X.X.5
Guo, W.W.6
-
20
-
-
33644750115
-
MiRBase: MicroRNA sequences, targets and gene nomenclature
-
Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A, Enright AJ. (2006). miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Research 34, D140-D144
-
(2006)
Nucleic Acids Research
, vol.34
, pp. D140-D144
-
-
Griffiths-Jones, S.1
Grocock, R.J.2
Van Dongen, S.3
Bateman, A.4
Enright, A.J.5
-
21
-
-
13444252847
-
Rfam: Annotating non-coding RNAs in complete genomes
-
Griffiths-Jones S, Moxon S, Marshall M, Khanna A, Eddy SR, Bateman A. (2005). Rfam: annotating non-coding RNAs in complete genomes. Nucleic Acids Research 33, D121-D124
-
(2005)
Nucleic Acids Research
, vol.33
, pp. D121-D124
-
-
Griffiths-Jones, S.1
Moxon, S.2
Marshall, M.3
Khanna, A.4
Eddy, S.R.5
Bateman, A.6
-
22
-
-
84902438808
-
The genetic control of apomixis: Asexual seed formation
-
Hand ML, Koltunow AMG. (2014). The genetic control of apomixis: asexual seed formation. Genetics 197, 441-450
-
(2014)
Genetics
, vol.197
, pp. 441-450
-
-
Hand, M.L.1
Koltunow, A.M.G.2
-
23
-
-
0035514192
-
Two complementary dominant genes controlling apomixis in genus Citrus and Poncirus
-
in Chinese with English abstract
-
Hong QB, Xiang SQ, Chen KL, Chen LG. (2001). Two complementary dominant genes controlling apomixis in genus Citrus and Poncirus. Acta Genetica Sinica 28, 1062-1067 (in Chinese with English abstract)
-
(2001)
Acta Genetica Sinica
, vol.28
, pp. 1062-1067
-
-
Hong, Q.B.1
Xiang, S.Q.2
Chen, K.L.3
Chen, L.G.4
-
24
-
-
0035032085
-
A cell plate-specific callose synthase and its interaction with phragmoplastin
-
Hong ZL, Delauney AJ, Verma DPS. (2001) A cell plate-specific callose synthase and its interaction with phragmoplastin. The Plant Cell 13, 755-768
-
(2001)
The Plant Cell
, vol.13
, pp. 755-768
-
-
Hong, Z.L.1
Delauney, A.J.2
Verma, D.P.S.3
-
25
-
-
0038477085
-
Stress-induced somatic embryogenesis in vegetative tissues of Arabidopsis thaliana
-
Ikeda-Iwai M, Umehara M, Satoh S, Kamada H. (2003). Stress-induced somatic embryogenesis in vegetative tissues of Arabidopsis thaliana. The Plant Journal 34, 107-114
-
(2003)
The Plant Journal
, vol.34
, pp. 107-114
-
-
Ikeda-Iwai, M.1
Umehara, M.2
Satoh, S.3
Kamada, H.4
-
26
-
-
0007638199
-
Inheritance of nucellar embryony in Citrus
-
Iwamasa M, Ueno I, Nishiura M. (1967). Inheritance of nucellar embryony in Citrus. Bulletin of the Fruit Tree Research Station, Series B 7, 1-8
-
(1967)
Bulletin of the Fruit Tree Research Station, Series B
, vol.7
, pp. 1-8
-
-
Iwamasa, M.1
Ueno, I.2
Nishiura, M.3
-
27
-
-
84892875108
-
Comparative transcriptome analysis between somatic embryos (SEs) and zygotic embryos in cotton: Evidence for stress response functions in SE development
-
Jin FY, Hu LS, Yuan DJ, Xu J, Gao WH, He L, Yang XY, Zhang XL. (2014). Comparative transcriptome analysis between somatic embryos (SEs) and zygotic embryos in cotton: evidence for stress response functions in SE development. Plant Biotechnology Journal 12, 161-173
-
(2014)
Plant Biotechnology Journal
, vol.12
, pp. 161-173
-
-
Jin, F.Y.1
Hu, L.S.2
Yuan, D.J.3
Xu, J.4
Gao, W.H.5
He, L.6
Yang, X.Y.7
Zhang, X.L.8
-
28
-
-
67651027923
-
AFLP markers closely linked to a major gene essential for nucellar embryony (apomixis) in Citrus maxima ? 1 Poncirus trifoliata
-
Kepiro JL, Roose ML. (2010). AFLP markers closely linked to a major gene essential for nucellar embryony (apomixis) in Citrus maxima ? Poncirus trifoliata. Tree Genetics & Genomes 6, 1-11
-
(2010)
Tree Genetics & Genomes
, vol.6
, pp. 1-11
-
-
Kepiro, J.L.1
Roose, M.L.2
-
29
-
-
84857960593
-
Polyembryony and seedling emergence traits in apomictic citrus
-
Kishore K, Monika N, Rinchen D, Lepcha B, Pandey B. (2012). Polyembryony and seedling emergence traits in apomictic citrus. Scientia Horticulturae 138, 101-107
-
(2012)
Scientia Horticulturae
, vol.138
, pp. 101-107
-
-
Kishore, K.1
Monika, N.2
Rinchen, D.3
Lepcha, B.4
Pandey, B.5
-
30
-
-
0000432305
-
Induction of somatic embryogenesis in carrot by heavy metal ions
-
Kiyosue T, Takano K, Kamada H, Harada H. (1990). Induction of somatic embryogenesis in carrot by heavy metal ions. Canadian Journal of Botany 68, 2301-2303
-
(1990)
Canadian Journal of Botany
, vol.68
, pp. 2301-2303
-
-
Kiyosue, T.1
Takano, K.2
Kamada, H.3
Harada, H.4
-
31
-
-
0027140729
-
Apomixis: Embryo sacs and embryos formed without meiosis or fertilization in ovules
-
Koltunow AM. (1993). Apomixis: embryo sacs and embryos formed without meiosis or fertilization in ovules. The Plant Cell 5, 1425-1437
-
(1993)
The Plant Cell
, vol.5
, pp. 1425-1437
-
-
Koltunow, A.M.1
-
32
-
-
0028815090
-
Anther, ovule, seed, and nucellar embryo development in Citrus sinensis cv Valencia
-
Koltunow AM, Soltys K, Nito N, McClure S. (1995). Anther, ovule, seed, and nucellar embryo development in Citrus sinensis cv. Valencia. Canadian Journal of Botany 73, 1567-1582
-
(1995)
Canadian Journal of Botany
, vol.73
, pp. 1567-1582
-
-
Koltunow, A.M.1
Soltys, K.2
Nito, N.3
McClure, S.4
-
33
-
-
84869093351
-
Selection and validation of suitable reference genes for miRNA expression normalization by quantitative RT-PCR in citrus somatic embryogenic and adult tissues
-
Kou SJ, Wu XM, Liu Z, Liu YL, Xu Q, Guo WW. (2012). Selection and validation of suitable reference genes for miRNA expression normalization by quantitative RT-PCR in citrus somatic embryogenic and adult tissues. Plant Cell Reports 31, 2151-2163
-
(2012)
Plant Cell Reports
, vol.31
, pp. 2151-2163
-
-
Kou, S.J.1
Wu, X.M.2
Liu, Z.3
Liu, Y.L.4
Xu, Q.5
Guo, W.W.6
-
34
-
-
84901458612
-
Comparative transcriptome analysis of ovules reveals stress related genes associated with nucellar polyembryony in citrus
-
Kumar V, Malik SK, Pal D, Srinivasan R, Bhat SR. (2014). Comparative transcriptome analysis of ovules reveals stress related genes associated with nucellar polyembryony in citrus. Tree Genetics & Genomes 10, 449-464
-
(2014)
Tree Genetics & Genomes
, vol.10
, pp. 449-464
-
-
Kumar, V.1
Malik, S.K.2
Pal, D.3
Srinivasan, R.4
Bhat, S.R.5
-
35
-
-
79953177468
-
Aligning short sequencing reads with Bowtie
-
11.7.1-11.7.14
-
Langmead B. (2010). Aligning short sequencing reads with Bowtie. Current Protocols in Bioinformatics 32, 11.7.1-11.7.14
-
(2010)
Current Protocols in Bioinformatics
, vol.32
-
-
Langmead, B.1
-
36
-
-
84930943194
-
Somatic and zygotic embryos share common developmental features at the onset of plant embryogenesis
-
Leljak-Levanić D, Mihaljević S, Bauer N. (2015). Somatic and zygotic embryos share common developmental features at the onset of plant embryogenesis. Acta Physiologiae Plantarum 37, 127
-
(2015)
Acta Physiologiae Plantarum
, vol.37
, pp. 127
-
-
Leljak-Levanić, D.1
Mihaljević, S.2
Bauer, N.3
-
37
-
-
77954895542
-
The origin of cultivated citrus as inferred from internal transcribed spacer and chloroplast DNA sequence and amplified fragment length polymorphism fingerprints
-
Li XM, Xie RJ, Lu ZH, Zhou ZQ. (2010). The origin of cultivated citrus as inferred from internal transcribed spacer and chloroplast DNA sequence and amplified fragment length polymorphism fingerprints. Journal of the American Society for Horticultural Science 135, 341-350
-
(2010)
Journal of the American Society for Horticultural Science
, vol.135
, pp. 341-350
-
-
Li, X.M.1
Xie, R.J.2
Lu, Z.H.3
Zhou, Z.Q.4
-
38
-
-
84906832695
-
Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange
-
Liu YL, Wang L, Chen DJ, Wu XM, Huang D, Chen LL, Li L, Deng XX, Xu Q. (2014). Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange. BMC Genomics 15, 695
-
(2014)
BMC Genomics
, vol.15
, pp. 695
-
-
Liu, Y.L.1
Wang, L.2
Chen, D.J.3
Wu, X.M.4
Huang, D.5
Chen, L.L.6
Li, L.7
Deng, X.X.8
Xu, Q.9
-
39
-
-
34547214644
-
Efficient isolation of RNA from fruit peel and pulp of ripening navel orange (citrus sinensis osbeck
-
in Chinese with English abstract
-
Liu YZ, Liu Q, Tao NG, Deng XX. (2006). Efficient isolation of RNA from fruit peel and pulp of ripening navel orange (Citrus sinensis Osbeck). Journal of Huazhong Agricultural University 25, 300-304 (in Chinese with English abstract
-
(2006)
Journal of Huazhong Agricultural University
, vol.25
, pp. 300-304
-
-
Liu, Y.Z.1
Liu, Q.2
Tao, N.G.3
Deng, X.X.4
-
40
-
-
84878213256
-
Selection and validation of suitable reference genes for mRNA qRT-PCR analysis using somatic embryogenic cultures, floral and vegetative tissues in citrus
-
Liu Z, Ge XX, Wu XM, Kou SJ, Chai LJ, Guo WW. (2013). Selection and validation of suitable reference genes for mRNA qRT-PCR analysis using somatic embryogenic cultures, floral and vegetative tissues in citrus. Plant Cell, Tissue and Organ Culture 113, 469-481
-
(2013)
Plant Cell, Tissue and Organ Culture
, vol.113
, pp. 469-481
-
-
Liu, Z.1
Ge, X.X.2
Wu, X.M.3
Kou, S.J.4
Chai, L.J.5
Guo, W.W.6
-
41
-
-
84856778846
-
Reference genes for accurate transcript normalization in citrus genotypes under different experimental conditions
-
Mafra V, Kubo KS, Alves-Ferreira M, Ribeiro-Alves M, Stuart RM, Boava LP, Rodrigues CM, Machado MA. (2012). Reference genes for accurate transcript normalization in citrus genotypes under different experimental conditions. PLoS One 7, e31263
-
(2012)
PLoS One
, vol.7
, pp. e31263
-
-
Mafra, V.1
Kubo, K.S.2
Alves-Ferreira, M.3
Ribeiro-Alves, M.4
Stuart, R.M.5
Boava, L.P.6
Rodrigues, C.M.7
Machado, M.A.8
-
42
-
-
60149090481
-
Criteria for annotation of plant microRNAs
-
Meyers BC, Axtell MJ, Bartel B, et al. (2008). Criteria for annotation of plant microRNAs. The Plant Cell 20, 3186-3190
-
(2008)
The Plant Cell
, vol.20
, pp. 3186-3190
-
-
Meyers, B.C.1
Axtell, M.J.2
Bartel, B.3
-
43
-
-
84877699848
-
Characterization of genes associated with polyembryony and in vitro somatic embryogenesis in Citrus
-
Nakano M, Kigoshi K, Shimizu T, Endo T, Shimada T, Fujii H, Omura M. (2013). Characterization of genes associated with polyembryony and in vitro somatic embryogenesis in Citrus. Tree Genetics & Genomes 9, 795-803
-
(2013)
Tree Genetics & Genomes
, vol.9
, pp. 795-803
-
-
Nakano, M.1
Kigoshi, K.2
Shimizu, T.3
Endo, T.4
Shimada, T.5
Fujii, H.6
Omura, M.7
-
44
-
-
84155189115
-
Characterization of genomic sequence showing strong association with polyembryony among diverse Citrus species and cultivars, and its synteny with Vitis and Populus
-
Nakano M, Shimada T, Endo T, Fujii H, Nesumi H, Kita M, Ebina M, Shimizu T, Omura M. (2012). Characterization of genomic sequence showing strong association with polyembryony among diverse Citrus species and cultivars, and its synteny with Vitis and Populus. Plant Science 183, 131-142
-
(2012)
Plant Science
, vol.183
, pp. 131-142
-
-
Nakano, M.1
Shimada, T.2
Endo, T.3
Fujii, H.4
Nesumi, H.5
Kita, M.6
Ebina, M.7
Shimizu, T.8
Omura, M.9
-
45
-
-
57649114155
-
Marker enrichment and construction of haplotypespecific BAC contigs for the polyembryony genomic region in Citrus
-
Nakano M, Shimizu T, Fujii H, Shimada T, Endo T, Nesumi H, Kuniga T, Omura M. (2008). Marker enrichment and construction of haplotypespecific BAC contigs for the polyembryony genomic region in Citrus. Breeding Science 58, 375-383
-
(2008)
Breeding Science
, vol.58
, pp. 375-383
-
-
Nakano, M.1
Shimizu, T.2
Fujii, H.3
Shimada, T.4
Endo, T.5
Nesumi, H.6
Kuniga, T.7
Omura, M.8
-
46
-
-
43149121588
-
Mapping and haplotyping of the flanking region of the polyembryony locus in Citrus unshiu Marcow
-
Nakano M, Shimizu T, Kuniga T, Nesumi H, Omura M. (2008). Mapping and haplotyping of the flanking region of the polyembryony locus in Citrus unshiu Marcow. Journal of the Japanese Society for Horticultural Science 77, 109-114
-
(2008)
Journal of the Japanese Society for Horticultural Science
, vol.77
, pp. 109-114
-
-
Nakano, M.1
Shimizu, T.2
Kuniga, T.3
Nesumi, H.4
Omura, M.5
-
47
-
-
77950086568
-
Control of female gamete formation by a small RNA pathway in Arabidopsis
-
Olmedo-Monfil V, Durán-Figueroa N, Arteaga-Vázquez M, Demesa-Arévalo E, Autran D, Grimanelli D, Slotkin RK, Martienssen RA, Vielle-Calzada J-P. (2010). Control of female gamete formation by a small RNA pathway in Arabidopsis. Nature 464, 628-632
-
(2010)
Nature
, vol.464
, pp. 628-632
-
-
Olmedo-Monfil, V.1
Durán-Figueroa, N.2
Arteaga-Vázquez, M.3
Demesa-Arévalo, E.4
Autran, D.5
Grimanelli, D.6
Slotkin, R.K.7
Martienssen, R.A.8
Vielle-Calzada, J.-P.9
-
48
-
-
59449089444
-
Proteomic analysis of somatic embryogenesis in Valencia sweet orange (citrus sinensis osbeck
-
Pan ZY, Guan R, Zhu SP, Deng XX. (2009). Proteomic analysis of somatic embryogenesis in Valencia sweet orange (Citrus sinensis Osbeck). Plant Cell Reports 28, 281-289
-
(2009)
Plant Cell Reports
, vol.28
, pp. 281-289
-
-
Pan, Z.Y.1
Guan, R.2
Zhu, S.P.3
Deng, X.X.4
-
49
-
-
84948736545
-
Induction of embryogenesis in Brassica napus microspores produces a callosic subintinal layer and abnormal cell walls with altered levels of callose and cellulose
-
Parra-Vega V, Corral-Martínez P, Rivas-Sendra A, Seguí-Simarro JM. (2015). Induction of embryogenesis in Brassica napus microspores produces a callosic subintinal layer and abnormal cell walls with altered levels of callose and cellulose. Frontiers in Plant Science 6, 1018
-
(2015)
Frontiers in Plant Science
, vol.6
, pp. 1018
-
-
Parra-Vega, V.1
Corral-Martínez, P.2
Rivas-Sendra, A.3
Seguí-Simarro, J.M.4
-
50
-
-
0037008225
-
The role of auxin, p H, and stress in the activation of embryogenic cell division in leaf protoplastderived cells of alfalfa
-
Pasternak TP, Prinsen E, Ayaydin F, Miskolczi P, Potters G, Asard H, Van Onckelen HA, Dudits D, Fehér A. (2002). The role of auxin, p H, and stress in the activation of embryogenic cell division in leaf protoplastderived cells of alfalfa. Plant Physiology 129, 1807-1819
-
(2002)
Plant Physiology
, vol.129
, pp. 1807-1819
-
-
Pasternak, T.P.1
Prinsen, E.2
Ayaydin, F.3
Miskolczi, P.4
Potters, G.5
Asard, H.6
Van Onckelen, H.A.7
Dudits, D.8
Fehér, A.9
-
51
-
-
4644286235
-
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-Acting siRNAs in Arabidopsis
-
Peragine A, Yoshikawa M, Wu G, Albrecht HL, Poethig RS. (2004). SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-Acting siRNAs in Arabidopsis. Genes & Development 18, 2368-2379
-
(2004)
Genes & Development
, vol.18
, pp. 2368-2379
-
-
Peragine, A.1
Yoshikawa, M.2
Wu, G.3
Albrecht, H.L.4
Poethig, R.S.5
-
52
-
-
75249087100
-
EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, McCarthy DJ, Smyth GK. (2010). edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-140
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
53
-
-
77953176036
-
A scaling normalization method for differential expression analysis of RNA-seq data
-
Robinson MD, Oshlack A. (2010) A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biology 11, R25
-
(2010)
Genome Biology
, vol.11
, pp. R25
-
-
Robinson, M.D.1
Oshlack, A.2
-
54
-
-
84903317444
-
Connecting stress to development in the induction of somatic embryogenesis
-
In: Aslam J, Srivastava PS, Sharma MP, eds. New Delhi: Narosa Publishing House
-
Rose RJ, Sheahan MB, Tiew TWY. (2013). Connecting stress to development in the induction of somatic embryogenesis. In: Aslam J, Srivastava PS, Sharma MP, eds. Somatic embryogenesis and gene expression. New Delhi: Narosa Publishing House, 146-165
-
(2013)
Somatic Embryogenesis and Gene Expression
, pp. 146-165
-
-
Rose, R.J.1
Sheahan, M.B.2
Tiew, T.W.Y.3
-
55
-
-
84905455425
-
Apomictic and sexual germline development differ with respect to cell cycle, transcriptional, hormonal and epigenetic regulation
-
Schmidt A, Schmid MW, Klostermeier UC, Qi W, Guthörl D, Sailer C, Waller M, Rosenstiel P, Grossniklaus U. (2014). Apomictic and sexual germline development differ with respect to cell cycle, transcriptional, hormonal and epigenetic regulation. PLoS Genetics 10, e1004476
-
(2014)
PLoS Genetics
, vol.10
, pp. e1004476
-
-
Schmidt, A.1
Schmid, M.W.2
Klostermeier, U.C.3
Qi, W.4
Guthörl, D.5
Sailer, C.6
Waller, M.7
Rosenstiel, P.8
Grossniklaus, U.9
-
56
-
-
79952901988
-
Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein
-
Singh M, Goel S, Meeley RB, Dantec C, Parrinello H, Michaud C, Leblanc O, Grimanelli D. (2011). Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein. The Plant Cell 23, 443-458
-
(2011)
The Plant Cell
, vol.23
, pp. 443-458
-
-
Singh, M.1
Goel, S.2
Meeley, R.B.3
Dantec, C.4
Parrinello, H.5
Michaud, C.6
Leblanc, O.7
Grimanelli, D.8
-
57
-
-
34248653184
-
Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants
-
Sparkes IA, Runions J, Kearns A, Hawes C. (2006). Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nature Protocols 1, 2019-2025
-
(2006)
Nature Protocols
, vol.1
, pp. 2019-2025
-
-
Sparkes, I.A.1
Runions, J.2
Kearns, A.3
Hawes, C.4
-
59
-
-
84870659809
-
Callose deposition is required for somatic embryogenesis in plasmolyzed Eleutherococcus senticosus zygotic embryos
-
Tao L, Yang Y, Wang QY, You XL. (2012). Callose deposition is required for somatic embryogenesis in plasmolyzed Eleutherococcus senticosus zygotic embryos. International Journal of Molecular Sciences 13, 14115-14126
-
(2012)
International Journal of Molecular Sciences
, vol.13
, pp. 14115-14126
-
-
Tao, L.1
Yang, Y.2
Wang, Q.Y.3
You, X.L.4
-
60
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
Trapnell C, Pachter L, Salzberg SL. (2009). TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25, 1105-1111
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
61
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L. (2010). Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nature Biotechnology 28, 511-515
-
(2010)
Nature Biotechnology
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
Van Baren, M.J.6
Salzberg, S.L.7
Wold, B.J.8
Pachter, L.9
-
62
-
-
84863338031
-
Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis
-
Tucker MR, Okada T, Hu Y, Scholefield A, Taylor JM, Koltunow AM. (2012). Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis. Development 139, 1399-1404
-
(2012)
Development
, vol.139
, pp. 1399-1404
-
-
Tucker, M.R.1
Okada, T.2
Hu, Y.3
Scholefield, A.4
Taylor, J.M.5
Koltunow, A.M.6
-
63
-
-
38849140922
-
Protocol: A highly sensitive RT-PCR method for detection and quantification of microRNAs
-
Varkonyi-Gasic E, Wu R, Wood M, Walton EF, Hellens RP. (2007). Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs. Plant Methods 3, 12
-
(2007)
Plant Methods
, vol.3
, pp. 12
-
-
Varkonyi-Gasic, E.1
Wu, R.2
Wood, M.3
Walton, E.F.4
Hellens, R.P.5
-
64
-
-
60149086351
-
Origin, biogenesis, and activity of plant microRNAs
-
Voinnet O. (2009). Origin, biogenesis, and activity of plant microRNAs. Cell 136, 669-687
-
(2009)
Cell
, vol.136
, pp. 669-687
-
-
Voinnet, O.1
-
65
-
-
84962159759
-
MiR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment
-
Wójcik AM, Gaj MD. (2016). miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment. Planta 244, 231-243
-
(2016)
Planta
, vol.244
, pp. 231-243
-
-
Wójcik, A.M.1
Gaj, M.D.2
-
66
-
-
84903980445
-
Sequencing of diverse Mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
-
Wu GA, Prochnik S, Jenkins J, et al. (2014). Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication. Nature Biotechnology 32, 656-662
-
(2014)
Nature Biotechnology
, vol.32
, pp. 656-662
-
-
Wu, G.A.1
Prochnik, S.2
Jenkins, J.3
-
67
-
-
84926419405
-
Genomewide analysis of small RNAs in nonembryogenic and embryogenic tissues of citrus: MicroRNA-And siRNA-mediated transcript cleavage involved in somatic embryogenesis
-
Wu XM, Kou SJ, Liu YL, Fang YN, Xu Q, Guo WW. (2015). Genomewide analysis of small RNAs in nonembryogenic and embryogenic tissues of citrus: microRNA-And siRNA-mediated transcript cleavage involved in somatic embryogenesis. Plant Biotechnology Journal 13, 383-394
-
(2015)
Plant Biotechnology Journal
, vol.13
, pp. 383-394
-
-
Wu, X.M.1
Kou, S.J.2
Liu, Y.L.3
Fang, Y.N.4
Xu, Q.5
Guo, W.W.6
-
68
-
-
84871962223
-
The draft genome of sweet orange (Citrus sinensis
-
Xu Q, Chen LL, Ruan X, et al. (2013). The draft genome of sweet orange (Citrus sinensis). Nature Genetics 45, 59-66
-
(2013)
Nature Genetics
, vol.45
, pp. 59-66
-
-
Xu, Q.1
Chen, L.L.2
Ruan, X.3
-
69
-
-
0036007982
-
An ankyrin repeat-containing protein plays a role in both disease resistance and antioxidation metabolism
-
Yan JQ, Wang J, Zhang H. (2002) An ankyrin repeat-containing protein plays a role in both disease resistance and antioxidation metabolism. The Plant Journal 29, 193-202
-
(2002)
The Plant Journal
, vol.29
, pp. 193-202
-
-
Yan, J.Q.1
Wang, J.2
Zhang, H.3
-
70
-
-
84876039714
-
Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis
-
Yang XY, Wang LC, Yuan DJ, Lindsey K, Zhang XL. (2013). Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis. Journal of Experimental Botony 64, 1521-1536
-
(2013)
Journal of Experimental Botony
, vol.64
, pp. 1521-1536
-
-
Yang, X.Y.1
Wang, L.C.2
Yuan, D.J.3
Lindsey, K.4
Zhang, X.L.5
-
71
-
-
33744498091
-
Cellular change and callose accumulation in zygotic embryos of Eleutherococcus senticosus caused by plasmolyzing pretreatment result in high frequency of single-cell-derived somatic embryogenesis
-
You XL, Yi JS, Choi YE. (2006). Cellular change and callose accumulation in zygotic embryos of Eleutherococcus senticosus caused by plasmolyzing pretreatment result in high frequency of single-cell-derived somatic embryogenesis. Protoplasma 227, 105-112
-
(2006)
Protoplasma
, vol.227
, pp. 105-112
-
-
You, X.L.1
Yi, J.S.2
Choi, Y.E.3
-
72
-
-
0027033951
-
Expression of antisense or sense RNA of an ankyrin repeat-containing gene blocks chloroplast differentiation in Arabidopsis
-
Zhang H, Scheirer DC, Fowle WH, Goodman HM. (1992). Expression of antisense or sense RNA of an ankyrin repeat-containing gene blocks chloroplast differentiation in Arabidopsis. The Plant Cell 4, 1575-1588
-
(1992)
The Plant Cell
, vol.4
, pp. 1575-1588
-
-
Zhang, H.1
Scheirer, D.C.2
Fowle, W.H.3
Goodman, H.M.4
-
73
-
-
84888402578
-
Laccase is necessary and nonredundant with peroxidase for lignin polymerization during vascular development in Arabidopsis
-
Zhao Q, Nakashima J, Chen F, Yin YB, Fu CX, Yun JF, Shao H, Wang XP, Wang ZY, Dixon RA. (2013). Laccase is necessary and nonredundant with peroxidase for lignin polymerization during vascular development in Arabidopsis. The Plant Cell 25, 3976-3987
-
(2013)
The Plant Cell
, vol.25
, pp. 3976-3987
-
-
Zhao, Q.1
Nakashima, J.2
Chen, F.3
Yin, Y.B.4
Fu, C.X.5
Yun, J.F.6
Shao, H.7
Wang, X.P.8
Wang, Z.Y.9
Dixon, R.A.10
|