Enzyme extraction from soil

Methods of Soil Enzymology

Volumn , Issue , 2015, Pages 371-383

  Fornasier, Flavio ^a   Dudal, Yves ^b   Quiquampoix, Hervé ^c  

^a ISTITUTO NAZIONALE DELLA NUTRIZIONE   (Italy)

^b Envolure   (France)

^c UMR ECO SOLS   (France)

Author keywords

Acetic acid; Phosphate buffer; Pyrophosphate buffer; Soil enzymes extraction; Soil proteomics; Triton X 100 and bovine serum albumin; Water extractant

Indexed keywords

EID: 84991074517     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9780891188582.c16     Document Type: Chapter

References (50)

1. Acosta-Martínez, V., and M.A. Tabatabai. 2002. Inhibition of arylamidase activity in soils by toluene. Soil Biol. Biochem. 34:229-237. doi:10.1016/S0038-0717(01)00177-8
2. Alef, K., and P. Nannipieri. 1995. Enzyme activities. p. 311-373. In K. Alef and P. Nannipieri (ed.) Methods in applied soil microbiology and biochemistry. Academic Press, London
3. Antoniani, C., T. Montanari, and A. Camoriano. 1954. Investigations on soil enzymology. I. Cathepsin-like activity. A preliminary note. (Article in Italian.) Ann. Fac. Agrar., Univ. Studi, Milan. 3:99-101
4. Bartha, R., and L. Bordeleau. 1969. Cell-free peroxidase in soil. Soil Biol. Biochem. 1:139-143. doi:10.1016/0038-0717(69)90004-2
5. Bollag, J.-M., C.-M. Chen, J.W. Sarkar, and M.J. Loll. 1987. Extraction and purification of a peroxidase from soil. Soil Biol. Biochem. 19:61-67. doi:10.1016/0038-0717(87)90126-X
6. Briggs, M.H., and L. Segal. 1963. Preparation and properties of a free soil enzyme. Life Sci. 2:69-72. doi:10.1016/0024-3205(63)90039-0
7. Burns, R.G. 1982. Enzyme activity in soil: Location and a possible role in microbial ecology. Soil Biol. Biochem. 14:423-427. doi:10.1016/0038-0717(82)90099-2
8. Burns, R.G., M.H. El-Sayed, and A.D. McLaren. 1972. Extraction of an urease-active organocomplex from soil. Soil Biol. Biochem. 4:107-108. doi:10.1016/0038-0717(72)90048-X
9. Busto, M.D., and M. Perez-Mateos. 1995. Extraction of humic-β-glucosidase fractions from soil. Biol. Fertil. Soils 20:77-82. doi:10.1007/BF00307845
10. Butler, J.H.A., and J.N. Ladd. 1969. The effect of methylation of humic acids on their influence on proteolytic enzyme activity. Aust. J. Soil Res. 7:263-268. doi:10.1071/SR9690263
11. Ceccanti, B., P. Nannipieri, S. Cervelli, and P. Sequi. 1978. Fractionation of humus-urease complexes. Soil Biol. Biochem. 10:39-45. doi:10.1016/0038-0717(78)90008-1
12. Chalvignac, M.A., and J. Mayaudon. 1971. Extraction and study of soil enzymes metabolising tryptophan. Plant Soil 34:25-31. doi:10.1007/BF01372757
13. Fermi, C. 1910. Sur les moyens de défense de l’estomac, de l’intestin, du pancréas et en géneral de la cellule et de l’albumine vivante vers les enzymes protéolitiques. Zbl. Bakt. Abt. I Orig. 56:55-86
14. Fornasier, F. 2002. Indirect approaches for assessing intracellular arylsulfatase activity in soil. p. 345-351. In A. Violante, P.M. Huang, J.-M. Bollag, and L. Gianfreda (ed.) Developments in soil science. No. 28. Vol. B. Elsevier Science B.V., Amsterdam
15. Fornasier, F., and A. Margon. 2007. Bovine serum albumin and Triton X-100 greatly increase phosphomonoesterases and arylsulphatase extraction yield from soil. Soil Biol. Biochem. 39:2682-2684. doi:10.1016/j.soilbio.2007.04.024
16. Frankenberger, W.T., and J.B. Johanson. 1986. Use of plasmolytic agents and antiseptics in soil enzyme assays. Soil Biol. Biochem. 18:209-213. doi:10.1016/0038-0717(86)90029-5
17. Getzin, L.W., and I. Rosefield. 1971. Partial purification and properties of a soil enzyme that degrades the insecticide malathion. Biochim. Biophys. Acta 235:442-453
18. Hayano, K.M. 1977. Extraction and properties of phosphodiesterase from a forest soil. Soil Biol. Biochem. 9:221-223. doi:10.1016/0038-0717(77)90079-7
19. Hayano, K.M., and A. Katami. 1977. Extraction of β-glucosidase activity from pea field soil. Soil Biol. Biochem. 9:349-351. doi:10.1016/0038-0717(77)90008-6
20. Hayano, K., M. Takeuchi, and F. Ichishima. 1987. Characterization of a metalloproteinase component extracted from soil. Biol. Fertil. Soils 4:179-183. doi:10.1007/BF00270938
21. Jenkinson, D.S., and J.N. Ladd. 1981. Microbial biomass in soil: Measurement and turnover. Soil Biochem. 5:415-471
22. Kandeler, E. 1990. Characterization of free and adsorbed phosphatases in soils. Biol. Fertil. Soils 9:199-202. doi:10.1007/BF00335808
23. Kiss, S., M. Dragan-Bularda, and D. Radulescu. 1975. Biological significance of enzymes accumulated in soil. Adv. Agron. 27:25-87. doi:10.1016/S0065-2113(08)70007-5
24. Ladd, J.N. 1972. Properties of proteolytic enzymes extracted from soil. Soil Biol. Biochem. 4:227-237. doi:10.1016/0038-0717(72)90015-6
25. Margon, A., and F. Fornasier. 2008. Determining soil enzyme location and related kinetics using rapid fumigation and high-yield extraction. Soil Biol. Biochem. 40:2178-2181. doi:10.1016/j.soilbio.2008.02.006
26. Martin-Smith, M. 1963. Uricolytic enzymes in soil. Nature 197:361-362. doi:10.1038/197361a0
27. Nannipieri, P. 2006. Role of stabilised enzymes in microbial ecology and enzyme extraction from soil with potential applications in soil proteomics. p. 75-94. In P. Nannipieri and K. Smalla (ed.) Nucleic acids and proteins in soil. Springer, Heidelberg
28. Nannipieri, P., B. Cerccanti, S. Cervelli, and C. Conti. 1982a. Hydrolases extracted from soil:Kinetic parameters of several enzymes catalyzing the same reaction. Soil Biol. Biochem. 14:429-432. doi:10.1016/0038-0717(82)90100-6
29. Nannipieri, P., B. Cerccanti, S. Cervelli, and S. Matarese. 1980. Extraction of phosphatase, urease, proteases, organic carbon, and nitrogen from soil. Soil Sci. Soc. Am. J. 44:1011-1016. doi:10.2136/sssaj1980.03615995004400050028x
30. Nannipieri, P., B. Cerccanti, S. Cervelli, and P. Sequi. 1974. Use of 0.1 M pyrophosphate to extract urease from a podzol. Soil Biol. Biochem. 6:359-362. doi:10.1016/0038-0717(74)90044-3
31. Nannipieri, P., B. Cerccanti, C. Conti, and D. Bianchi. 1982b. Hydrolases extracted from soil: Their properties and activities. Soil Biol. Biochem. 14:257-263. doi:10.1016/0038-0717(82)90035-9
32. Nannipieri, P., P. Sequi, and P. Fusi. 1996. Humus and enzyme activity. p. 293-328 In A. Piccolo (ed.) Humic substances in terrestrial ecosystems. Elsevier Science B.V., Amsterdam
33. Ogunseitan, O.A. 2006. Soil proteomics: Extraction and analysis of proteins from soil. p. 95-115. In P. Nannipieri and K. Smalla (ed.) Nucleic acids and proteins in soil. Springer, Heidelberg
34. Pancholy, S.K., and J.Q. Lynd. 1972. Quantitative fluorescence analysis of soil lipase activity. Soil Biol. Biochem. 4:257-259. doi:10.1016/0038-0717(72)90018-1
35. Perez-Mateos, M., S. Gonzales-Carcedo, and M.D. Busto Nuñez. 1988. Extraction of catalase from soil. Soil Sci. Soc. Am. J. 52:408-411. doi:10.2136/sssaj1988.03615995005200020018x
36. Piccolo, A. 2001. The supramolecular structure of humic acids. Soil Sci. 166:810-832. doi:10.1097/00010694-200111000-00007
37. Quiquampoix, H. 2000. Mechanisms of protein adsorption on surfaces and consequences for extracellular enzyme activity in soil. p. 171-206. In J.-M. Bollag and G. Stotzky (ed.) Soil biochemistry. Vol. 10. Marcel Dekker, New York
38. Quiquampoix, H. 2008. Enzymes and proteins, interactions with soil constituent surfaces. p. 210-216. In W. Chesworth ed. Encyclopedia of soil science, Springer, Dordrecht, Berlin, Heidelberg, New York
39. Quiquampoix, H., S. Servagent-Noinville, and M.H. Baron. 2002. Enzyme adsorption on soil mineral surfaces and consequences for the catalytic activity. p. 285-306. In R.G. Burns and R.P. Dick (ed.) Enzymes in the environment: Activity, ecology, and applications. Marcel Dekker, New York
40. Simonart, P., L. Batistic, and J. Mayaudon. 1967. Isolation of protein from humic acid extracted from soil. Plant Soil 27:153-161. doi:10.1007/BF01373385
41. Skujiņš, J.J. 1967. Enzymes in soil. Soil Biochem. 1:371-414
42. Skujiņš, J.J., and R.G. Burns. 1976. Extracellular enzymes in soil. Crit. Rev. Microbiol. 4:383-421. doi:10.3109/10408417609102304
43. Stevenson, F.J. 1994. Humus chemistry, genesis, composition, reactions. John Wiley & Sons, New York
44. Subrahmanyan, V. 1927. Biochemistry of water-logged soil: Part II. The presence of a deaminase in water-logged soils and its role in the production of ammonia. J. Agric. Sci. 17:429-448. doi:10.1017/S0021859600018748
45. Sutt on, R., and G. Sposito. 2005. Molecular structure in soil humic substances: The current view. Environ. Sci. Technol. 39:9009-9015. doi:10.1021/es050778q
46. Tabatabai, M.A. 1994. Soil Enzymes. p. 775-833. In R.W. Weaver, J.S. Angle, and P.S. Bott omley (ed.) Methods of soil analysis. Part 2. Microbiological and biochemical properties. SSSA, Madison, WI
47. Tabatabai, M.A., and M. Fu. 1992. Extraction of enzymes from soil. Soil Biochem. 7:197-227
48. Ukhtomskaya, F.I. 1952. The role of enzymes in the self-cleaning of soils. (In Russian with English abstract.) Gig. Sanit. 11:46-51
49. Vepsalainen, M. 2001. Poor enzyme recovery from soils. Soil Biol. Biochem. 33:1131-1135. doi:10.1016/S0038-0717(00)00240-6
50. Weetall, H.H. 1975. Immobilized enzymes and their application in the food and beverage industry. Process Biochem. 10:3-24