Virus shapes and buckling transitions in spherical shells

Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics

Volumn 68, Issue 5, 2003, Pages

  Lidmar, Jack ^a   Mirny, Leonid ^b   Nelson, David R ^c  

^a ROYAL INSTITUTE OF TECHNOLOGY   (Sweden)

^b MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^c HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BENDING (DEFORMATION); BUCKLING; CRYSTALS; ELASTIC MODULI; ELECTRON MICROSCOPY; FRACTURE; MATHEMATICAL MODELS; PROTEINS; RIGIDITY; SHELLS (STRUCTURES); STRUCTURAL ANALYSIS;

BUCKLING TRANSITIONS; ELASTIC ENERGY;

VIRUSES;

VIRUS DNA;

CHEMISTRY; ELECTRON MICROSCOPY; FREEZE FRACTURE; POLYOMAVIRUS; STATISTICAL MODEL; VIRUS; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; DNA, VIRAL; FREEZE FRACTURING; MICROSCOPY, ELECTRON; MODELS, STATISTICAL; POLYOMAVIRUS; VIRUSES;

EID: 84990912978     PISSN: 1063651X     EISSN: None     Source Type: Journal    
DOI: 10.1103/PhysRevE.68.051910     Document Type: Article

References (38)

1. Structural Biology of Viruses, edited by W. Chiu, R.M. Burnett and R.L. Garcea (Oxford Univeristy Press, New York, 1997).
2. S.C. Harrison, Harvey Lect. 85, 127 (1991).
3. T.S. Baker, N.H. Olson, and S.D. Fuller, Microbiol. Mol. Biol. Rev. 63, 862 (1999).
4. D.E. Smith, S.J. Tans, S.B. Smith, S. Grimes, D.L. Anderson and C. Bustamante, Nature (London) 413, 748 (2001).
5. L.D. Landau and I.M. Lifshitz, Theory of Elasticity (Pergamon, New York, 1975).
6. F. Crick and and J.D. Watson, Nature (London) 177, 473 (1956).
7. D. Caspar and A. Klug, Cold Spring Harb Symp. Quant Biol. 27, 1 (1962).
8. H.M.S. Coxeter, Introduction to Geometry (Wiley, New York, 1969), Chaps. 19–21.
9. V. Reddy, P. Natarajan, B. Okerberg, K. Li, K. Damodaran, M.R. Brooks III, and J. Johnson, J. Virol. 75, 11943 (2001);
10. P.L. Stewart, R.M. Burnett, and S.D. Fuller, Cell 67, 145 (1991).
11. A.G. Murzin, S.E. Brenner, T. Hubbard, and C. Chothia, J. Mol. Biol. 247, 536 (1995);http://scop.mrc-lmb.cam.ac.uk/scop/data/scop.b.c.bd.b.html
12. M. Carrion-Vazquez, A.F. Oberhauser, T.E. Fisher, P.E. Marszalek, and H. Li, J.M. Fernandez, Prog. Biophys. Mol. Biol. 74, 63 (2000).
13. M.S. Kellermayer, C. Bustamante, and H.L. Granzier, Biochim. Biophys. Acta 1604, 105 (2003).
14. S. Seung and D.R. Nelson, Phys. Rev. A 38, 1005 (1988).
15. D.R. Nelson and L. Peliti, J. Phys. 48, 1085 (1987), and references therein.
16. M.J. Bowick, D.R. Nelson, and A. Travesset, Phys. Rev. B 62, 8738 (2000);
17. see also A.R. Bausch, M.J. Bowick, A. Cacciuto, A.D. Dinsmore, M.F. Hsu, D.R. Nelson, M.G. Nikolaides, A. Travesset, and D.A. Weitz, Science 299, 1716 (2003).
18. A.E. Lobkovsky, Phys. Rev. E 53, 3750 (1996).
19. A.E. Lobkovsky and T.A. Witten, Phys. Rev. E 55, 1577 (1997).
20. E. Cerda and L. Mahadevan, Phys. Rev. Lett. 80, 2358 (1998).
21. A.E. Blaurock and R.C. Gamble, J. Membr. Biol. 50, 187 (1979);E. Sackmann and R. Lipowsky, Handbook of Biological Physics, edited by A.J. Hoff (North-Holland, Amsterdam, 1995), Vol. 1B.
22. M. Dubois, B. Demé, T. Gulik-Krzywicki, J.-C. Dedieu, C. Vantrin, S. Desert, E. Perz, and T. Zemb, Nature (London) 411, 672 (2001).
23. Y. Kantor and D.R. Nelson, Phys. Rev. A 36, 4020 (1987).
24. X. Yan, N.H. Olson, J.L. Van Etten, M. Bergoin, M.G. Rossmann, and T.S. Baker, Nature Structural Biol. 7, 101 (2000).
25. P. Steinhardt, D.R. Nelson, and M. Ronchetti, Phys. Rev. Lett. 47, 1297 (1981);
26. P. SteinhardtD.R. NelsonM. RonchettiPhys. Rev. B 28, 784 (1983).
27. For an analogous exploration of the shapes of liquid membranes with a spherical topology, see U. Seifert, Adv. Phys. 46, 13 (1997);
28. see also H. Noguchi, Phys. Rev. E 67, 041901 (2003).
29. See, e.g., D.R. Nelson, Defects and Geometry in Condensed Matter Physics (Cambridge University Press, Cambridge, 2002).
30. See, e.g., S. Leibler in Statistical Mechanics of Membranes and Interfaces, edited by D.R. Nelson, T. Piran, and S. Weinberg (World Scientific, Singapore, 1989).
31. J.F. Conway, W.R. Wikoff, N. Cheng, R.L. Duda, R.W. Hendrix, J.E. Johnson, and A.C. Steven, Science 292, 744 (2001).
32. S.A. Safran, Statistical Thermodynamics of Surfaces, Interfaces and Membranes (Addison-Wesley, New York, 1994).
33. V.S. Reddy, H.A. Giesing, R.T. Morton, A. Kumar, C.B. Post, C.L. Brooks III, and J.E. Johnson, Biophys. 74, 546 (1998).
34. P.K. Sorger, P.G. Stockley, and S.C. Harrison, J. Mol. Biol. 191, 639 (1986).
35. D.M. Salunke, D.L. Caspar, and R.L. Garcea, Biophys. 56, 887 (1989).
36. R.F. Bruinsma, W.M. Gelbart, D. Reguera, J. Rudnick, and R. Zandi, Phys. Rev. Lett. 90, 248101 (2003).
37. W.C. Earnshaw and S.C. Harrison, Nature (London) 268, 598 (1977).
38. J. Rudnick and R.F. Bruinsma, e-print cond-mat/0301305, and references therein.