Assemblytics: A web analytics tool for the detection of variants from an assembly

Bioinformatics

Volumn 32, Issue 19, 2016, Pages 3021-3023

  Nattestad, Maria ^a   Schatz, Michael C ^a,b  

^a Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^b Johns Hopkins University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC VARIATION; GENOME; GENOMICS; HUMAN; SOFTWARE;

GENETIC VARIATION; GENOME; GENOMICS; HUMANS; SOFTWARE;

EID: 84990891493     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btw369     Document Type: Article

References (5)

1. Berlin, K. et al. (2015) Assembling large genomes with single-molecule sequencing and locality-sensitive hashing. Nat. Biotechnol., 33, 623-630.
2. Kurtz, S. et al. (2004) Versatile and open software for comparing large genomes. Genome Biol., 5, R12.
3. Lee, H. et al. (2014) Error correction and assembly complexity of single molecule sequencing reads. bioRxiv. (doi: http://dx.doi.org/10.1101/006395).
4. Phillippy, A.M. et al. (2008) Genome assembly forensics: finding the elusive mis-assembly. Genome Biol., 9, R55.
5. Roberts, R.J. et al. (2013) The advantages of SMRT sequencing. Genome Biol., 14, 405.