Draft genome sequences of two closely related aflatoxigenic aspergillus species obtained from the ivory coast

Genome Biology and Evolution

Volumn 8, Issue 3, 2016, Pages 729-732

  Moore, Geromy G ^a   Mack, Brian M ^a   Beltz, Shannon B ^a  

^a SOUTHERN REGIONAL RESEARCH CENTER   (United States)

Author keywords

Aspergillus ochraceoroseus; Aspergillus rambellii; Genome sequence; Mating type locus; Phylogenomics

Indexed keywords

AFLATOXIN B1; FUNGAL DNA; STERIGMATOCYSTIN;

ASPERGILLUS; BIOSYNTHESIS; CLASSIFICATION; COMPARATIVE GENOMIC HYBRIDIZATION; COTE D'IVOIRE; DNA SEQUENCE; FUNGAL GENOME; GENETICS; MULTIGENE FAMILY;

AFLATOXIN B1; ASPERGILLUS; COMPARATIVE GENOMIC HYBRIDIZATION; COTE D'IVOIRE; DNA, FUNGAL; GENOME, FUNGAL; MULTIGENE FAMILY; SEQUENCE ANALYSIS, DNA; STERIGMATOCYSTIN;

EID: 84985896455     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evv246     Document Type: Article

References (18)

1. Bartoli A,Maggi O. 1978. Four new species of Aspergillus from Ivory Coast soil. Trans Br Mycol Soc. 71:383-394.
2. Cary JW, Ehrlich KC, Beltz SB, Harris-Coward P, Klich MA. 2009. Characterization of the Aspergillus ochraceoroseus aflatoxin/sterigmatocystin biosynthetic gene cluster. Mycologia 101:352-362.
3. Cary JW, et al. 2012. Functional and phylogenetic analysis of the Aspergillus ochraceoroseus aflQ (ordA) gene ortholog. Mycologia. 104:857-864.
4. Ehrlich KC, Yu J, Cotty PJ. 2005. Aflatoxin biosynthesis gene clusters and flanking regions. J Appl Microbiol. 99:518-527.
5. Frisvad JC, Skouboe P, Samson RA. 2005. Taxonomic comparison of three different groups of aflatoxin producers and a new efficient producer of aflatoxin B1, sterigmatocystin and 3-O-methylsterigmatocystin, Aspergillus rambellii sp. nov. Sys Appl Microbiol. 28:442-453.
6. Galagan JE, et al. 2005. Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature. 438: 1105-1115.
7. Kelkar YD, Ochman H. 2012. Causes and consequences of genome expansion in fungi. Genome Biol Evol. 4:13-23.
8. Klich MA, Cary JW, Beltz SB, Bennett CA. 2003. Phylogenetic and morphological analysis of Aspergillus ochraceoroseus. Mycologia 95: 1252-1260.
9. Medema MH, et al. 2011. antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. Nucleic Acids Res. 39: W339-W346.
10. Moore GG, Mack BM, Beltz SB. 2015. Genomic sequence of the aflatoxigenic filamentous fungus Aspergillus nomius. BMC Genomics 16:551.
11. Ni M, Feretzaki M, Sun S, Wang X, Heitman J. 2011. Sex in fungi. Annu Rev Genet. 45:405-430.
12. Nierman WC, et al. 2005. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature 438: 1151-1156.
13. Nierman WC, et al. 2015. Genome sequence of Aspergillus flavus NRRL 3357, a strain that causes aflatoxin contamination of food and feed. ASM Genome Announc. 3:e00168-15
14. Parra G, Bradnam K, Korf I. 2007. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 23:1061-1067.
15. Ramirez-Prado JH, Moore GG, Horn BW, Carbone I. 2008. Characterization and population analysis of the mating-type genes in Aspergillus flavus and Aspergillus parasiticus. Fungal Genet Biol. 45:1292-1299.
16. Samuel SM, Aiko V, Panda P, Mehta A. 2013. Aflatoxin B1 occurrence, biosynthesis and its degradation. J Pure Appl Microbiol. 7:965-971.
17. Wortman JR, et al. 2009. The 2008 update of the Aspergillus nidulans genome annotation: a community effort. Fungal Genet Biol. 46: S2-S13.
18. Yu J, et al. 2004. Clustered pathway genes in aflatoxin biosynthesis. Appl Environ Microbiol. 70:1253-1262.