Microbiota in breast milk of Chinese lactating mothers

PLoS ONE

Volumn 11, Issue 8, 2016, Pages

  Sakwinska, Olga ^a   Moine, Déborah ^a   Delley, Michèle ^a   Combremont, Séverine ^a   Rezzonico, Enea ^a,c   Descombes, Patrick ^a   Vinyes Pares, Gerard ^a   Zhang, Yumei ^b   Wang, Peiyu ^b   Thakkar, Sagar K ^a  

^a NESTLÉ RESEARCH CENTER   (Switzerland)

^b PEKING UNIVERSITY HEALTH SCIENCE CENTER   (China)

^c Le Grand Chemin 92   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ACINETOBACTER; ADULT; ARTICLE; BACTERIAL COUNT; BIFIDOBACTERIUM; BREAST MILK; CHINESE; CONTROLLED STUDY; EATING HABIT; FEMALE; FOOD COMPOSITION; HUMAN; LACTATION; LACTOBACILLUS; MICROFLORA; NONHUMAN; POLYMERASE CHAIN REACTION; QUANTITATIVE ANALYSIS; SPECIES COMPOSITION; SPECIES DOMINANCE; STAPHYLOCOCCUS; STREPTOCOCCUS; ADOLESCENT; BREAST FEEDING; CHINA; GENETICS; MICROBIOLOGY; MOTHER; YOUNG ADULT;

RNA 16S;

ADOLESCENT; ADULT; BREAST FEEDING; CHINA; HUMANS; LACTATION; MICROBIOTA; MILK, HUMAN; MOTHERS; RNA, RIBOSOMAL, 16S; YOUNG ADULT;

EID: 84984780906     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0160856     Document Type: Article

References (38)

1. Liebhaber M, Lewiston NJ, Asquith MT, Sunshine P. Comparison of bacterialcontamination with two methods of human milk collection. The Journal of Pediatrics. 1978; 92(2):236-7. doi: 10.1016/S0022-3476(78)80014-6 PMID: 621605
2. Eidelman AI, Szilagyi G. Patterns of bacterial colonization of human milk. Obstet Gynecol. 1979; 53 (5):550-2.
3. Carroll L, Osman M, Davies DP, McNeish AS. Bacteriology of raw breast milk. The Lancet. 1979; 314 (8153):1186. doi: 10.1016/S0140-6736(79)92409-7
4. West PA, Hewitt JH, Murphy OM. The Influence of Methods of Collection and Storage on the Bacteriology of Human Milk. J Appl Bacteriol. 1979; 46:269-11. PMID: 572360
5. El-Mohandes AE, Schatz V, Keiser JF, Jackson BJ. Bacterial contaminants of collected and frozen human milk used in an intensive care nursery. AJIC: American Journal of Infection Control. 1993; 21 (5):226-30.
6. Heikkilä MP, Saris PEJ. Inhibition of Staphylococcus aureus by the commensal bacteria of human milk. J Appl Microbiol. 2003; 95(3):471-8. PMID: 12911694
7. Jiménez E, Delgado S, Fernández L, García N, Albújar M, Gómez A, et al. Assessment of the bacterial diversity of human colostrum and screening of staphylococcal and enterococcal populations for potential virulence factors. Res Microbiol. 2008; 159(9-10):595-601. doi: 10.1016/j.resmic.2008.09.001 PMID: 18845249
8. Jost T, Lacroix C, Braegger C, Chassard C. Assessment of bacterial diversity in breast milk using culture-dependent and culture-independent approaches. Br J Nutr. 2013; 110(7):1253-62. doi: 10.1017/S0007114513000597 PMID: 23507238
9. Solís G, de los Reyes-Gavilan CG, Fernández N, Margolles A, Gueimonde M. Establishment and development of lactic acid bacteria and bifidobacteria microbiota in breast-milk and the infant gut. Anaerobe. 2010; 16(3):307-10. doi: 10.1016/j.anaerobe.2010.02.004 PMID: 20176122
10. Huttenhower C, Gevers D, Knight R, Abubucker S, Badger JH, Chinwalla AT, et al. Structure, function and diversity of the healthy human microbiome. Nature. 2012; 486(7402):207-14. doi: 10.1038/nature11234 PMID: 22699609
11. Collado MC, Delgado S, Maldonado A, Rodríguez JM. Assessment of the bacterial diversity of breast milk of healthy women by quantitative real-time PCR. Lett Appl Microbiol. 2009; 48(5):523-8. doi: 10.1111/j.1472-765X.2009.02567.x PMID: 19228290
12. Grönlund MM, Gueimonde M, Laitinen K, Kociubinski G, Grönroos T, Salminen S, et al. Maternal breast-milk and intestinal bifidobacteria guide the compositional development of the Bifidobacterium microbiota in infants at risk of allergic disease. Clin Exp Allergy. 2007; 37(12):1764-72. PMID: 17941914
13. Gueimonde M, Laitinen K, Salminen S, Isolauri E. Breast milk: A source of bifidobacteria for infant gut development and maturation? Neonatology. 2007; 92(1):64-6. PMID: 17596738
14. Martín R, Jiménez E, Heilig H, Fernández L, Marín ML, Zoetendal EG, et al. Isolation of bifidobacteria from breast milk and assessment of the bifidobacterial population by PCR-denaturing gradient gel electrophoresis and quantitative real-time PCR. Appl Environ Microbiol. 2009; 75(4):965-9. doi: 10.1128/AEM.02063-08 PMID: 19088308
15. Cabrera-Rubio R, Collado MC, Laitinen K, Salminen S, Isolauri E, Mira A. The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery. Am J Clin Nutr. 2012; 96(3):544-51. doi: 10.3945/ajcn.112.037382 PMID: 22836031
16. Cabrera-Rubio R, Mira-Pascual L, Mira A, Collado MC. Impact of mode of delivery on the milk microbiota composition of healthy women. Journal of Developmental Origins of Health and Disease. 2015. doi: 10.1017/S2040174415001397
17. Khodayar-Pardo P, Mira-Pascual L, Collado MC, Martínez-Costa C. Impact of lactation stage, gestational age and mode of delivery on breast milk microbiota. J Perinatol. 2014; 34(8):599-605. doi: 10.1038/jp.2014.47 PMID: 24674981
18. Hunt KM, Preuss J, Nissan C, Davlin CA, Williams JE, Shafii B, et al. Human milk oligosaccharides promote the growth of staphylococci. Appl Environ Microbiol. 2012; 78(14):4763-70. doi: 10.1128/AEM. 00477-12 PMID: 22562995
19. Urbaniak C, McMillan A, Angelini M, Gloor GB, Sumarah M, Burton JP, et al. Effect of chemotherapy on the microbiota and metabolome of human milk, a case report. Microbiome. 2014; 2(1):24. doi: 10.1186/2049-2618-2-24
20. Jiménez E, De Andrés J, Manrique M, Pareja-Tobes P, Tobes R, Martínez-Blanch JF, et al. Metagenomic analysis of milk of healthy and mastitis-suffering women. J Hum Lact. 2015; 31(3):406-15. doi: 10.1177/0890334415585078 PMID: 25948578
21. Ward TL, Hosid S, Ioshikhes I, Altosaar I. Human milk metagenome: A functional capacity analysis. BMC Microbiology. 2013; 13(1):113.
22. Austin S, De Castro C, Bénet T, Hou Y, Sun H, Thakkar S, et al. Temporal Change of the Content of 10 Oligosaccharides in the Milk of Chinese Urban Mothers. Nutrients. 2016; 8(6):346. doi: 10.3390/nu8060346
23. Nadkarni MA, Martin FE, Jacques NA, Hunter N. Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology. 2002; 148(1):257-66.
24. Matsuki T, Watanabe K, Fujimoto J, Miyamoto Y, Takada T, Matsumoto K, et al. Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces. Appl Environ Microbiol. 2002; 68(11):5445-51. PMID: 12406736
25. Penders J, Thijs C, Vink C, Stelma FF, Snijders B, Kummeling I, et al. Factors influencing the composition of the intestinal microbiota in early infancy. Pediatrics. 2006; 118(2):511-21. PMID: 16882802
26. Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME Journal. 2012; 6 (8):1621-4. doi: 10.1038/ismej.2012.8 PMID: 22402401
27. Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, et al. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009; 75(23):7537-41. doi: 10.1128/AEM.01541-09 PMID: 19801464
28. Kozich J, Westcott SL, Baxter NT, Highlander SK, Schloss PD. Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the miseq illumina sequencing platform. Appl Environ Microbiol. 2013; 79(17):5112-20. doi: 10.1128/AEM.01043-13 PMID: 23793624
29. Huse SM, Welch DM, Morrison HG, Sogin ML. Ironing out the wrinkles in the rare biosphere through improved OTU clustering. Environmental Microbiology. 2010; 12(7):1889-98. doi: 10.1111/j.1462-2920.2010.02193.x PMID: 20236171
30. Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics. 2011; 27(16):2194-200. doi: 10.1093/bioinformatics/btr381 PMID: 21700674
31. Biesbroek G, Sanders EAM, Roeselers G, Wang X, Caspers MPM, Trzciński K, et al. Deep Sequencing Analyses of Low Density Microbial Communities: Working at the Boundary of Accurate Microbiota Detection. PLoS ONE. 2012; 7(3):e32942. doi: 10.1371/journal.pone.0032942 PMID: 22412957
32. Albesharat R, Ehrmann MA, Korakli M, Yazaji S, Vogel RF. Phenotypic and genotypic analyses of lactic acid bacteria in local fermented food, breast milk and faeces of mothers and their babies. Syst Appl Microbiol. 2011; 34(2):148-55. doi: 10.1016/j.syapm.2010.12.001 PMID: 21300508
33. Martín V, Maldonado-Barragán A, Moles L, Rodriguez-Baños M, Campo RD, Fernández L, et al. Sharing of bacterial strains between breast milk and infant feces. J Hum Lact. 2012; 28(1):36-44. doi: 10.1177/0890334411424729 PMID: 22267318
34. Makino H, Martin R, Ishikawa E, Gawad A, Kubota H, Sakai T, et al. Multilocus sequence typing of bifidobacterial strains from infant's faeces and human milk: are bifidobacteria being sustainably shared during breastfeeding? Benef Microbes. 2015; 6(4):563-72. doi: 10.3920/BM2014.0082 PMID: 25691099.
35. Soto A, Martín V, Jiménez E, Mader I, Rodríguez JM, Fernández L. Lactobacilli and bifidobacteria in human breast milk: Influence of antibiotherapy and other host and clinical factors. J Pediatr Gastroenterol Nutr. 2014; 59(1):78-88. doi: 10.1097/MPG.0000000000000347 PMID: 24590211
36. Cabrera-Rubio R, Mira-Pascual L, Mira A, Collado MC. Impact of mode of delivery on the milk microbiota composition of healthy women. Journal of Developmental Origins of Health and Disease. 2016; 7 (01):54-60. doi: 10.1017/S2040174415001397
37. Urbaniak C, Angelini M, Gloor GB, Reid G. Human milk microbiota profiles in relation to birthing method, gestation and infant gender. Microbiome. 2016; 4(1):1-9. doi: 10.1186/s40168-015-0145-y
38. Collado MC, Laitinen K, Salminen S, Isolauri E. Maternal weight and excessive weight gain during pregnancy modify the immunomodulatory potential of breast milk. Pediatr Res. 2012; 72(1):77-85. doi: 10.1038/pr.2012.42 PMID: 22453296