Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree

BMC Genomics

Volumn 17, Issue , 2016, Pages

  Kojima, Kaname ^a   Kawai, Yosuke ^a   Nariai, Naoki ^b   Mimori, Takahiro ^a   Hasegawa, Takanori ^a   Nagasaki, Masao ^a  

^a TOHOKU UNIVERSITY   (Japan)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Coalescent theory; High throughput sequencing; Short tandem repeat

Indexed keywords

COMPARATIVE EFFECTIVENESS; CONTROLLED STUDY; EXOME; GENEALOGY; GENOTYPE; HAPLOTYPE MAP; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN EXPERIMENT; INTERMETHOD COMPARISON; MARKOV CHAIN; SHORT TANDEM REPEAT; STATISTICAL MODEL; ALGORITHM; COMPUTER SIMULATION; DNA SEQUENCE; HUMAN GENOME;

MICROSATELLITE DNA;

ALGORITHMS; COMPUTER SIMULATION; GENOME, HUMAN; HUMANS; MICROSATELLITE REPEATS; MODELS, STATISTICAL; SEQUENCE ANALYSIS, DNA;

EID: 84984680195     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-016-2821-0     Document Type: Article

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