-
1
-
-
34548512496
-
Natural merodiploidy of the lux-rib operon of Photobacterium leiognathi from coastal waters of Honshu, Japan
-
Ast J.C., Urbanczyk H., Dunlap P.V. Natural merodiploidy of the lux-rib operon of Photobacterium leiognathi from coastal waters of Honshu, Japan. J. Bacteriol. 2007, 189:6148-6158.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 6148-6158
-
-
Ast, J.C.1
Urbanczyk, H.2
Dunlap, P.V.3
-
2
-
-
67651061200
-
Multi-gene analysis reveals previously unrecognized phylogenetic diversity in Aliivibrio
-
Ast J.C., Urbanczyk H., Dunlap P.V. Multi-gene analysis reveals previously unrecognized phylogenetic diversity in Aliivibrio. Syst. Appl. Microbiol. 2009, 32:379-386.
-
(2009)
Syst. Appl. Microbiol.
, vol.32
, pp. 379-386
-
-
Ast, J.C.1
Urbanczyk, H.2
Dunlap, P.V.3
-
3
-
-
74049126056
-
Vibrio owensii sp. nov., isolated from cultured crustaceans in Australia
-
Cano-Gómez A., Goulden E.F., Owens L., Høj L. Vibrio owensii sp. nov., isolated from cultured crustaceans in Australia. FEMS Microbiol. Lett. 2010, 302:175-181.
-
(2010)
FEMS Microbiol. Lett.
, vol.302
, pp. 175-181
-
-
Cano-Gómez, A.1
Goulden, E.F.2
Owens, L.3
Høj, L.4
-
4
-
-
84904906160
-
Vibrio ecology, pathogenesis, and evolution
-
Ceccarelli D., Colwell R.R. Vibrio ecology, pathogenesis, and evolution. Front. Microbiol. 2014, 28:256.
-
(2014)
Front. Microbiol.
, vol.28
, pp. 256
-
-
Ceccarelli, D.1
Colwell, R.R.2
-
5
-
-
84879821686
-
Luminous bacteria
-
Springer, New York, NY, E. Rosenberg, E.F. DeLong, S. Lory, E. Stackebrandt, F. Thompson (Eds.)
-
Dunlap P.V., Urbanczyk H. Luminous bacteria. The Prokaryotes 2013, 492-528. Springer, New York, NY. E. Rosenberg, E.F. DeLong, S. Lory, E. Stackebrandt, F. Thompson (Eds.).
-
(2013)
The Prokaryotes
, pp. 492-528
-
-
Dunlap, P.V.1
Urbanczyk, H.2
-
6
-
-
81155146061
-
Historical microbiology: revival and phylogenetic analysis of the luminous bacterial cultures of M. W. Beijerinck
-
Figge M.J., Robertson L.A., Ast J.C., Dunlap P.V. Historical microbiology: revival and phylogenetic analysis of the luminous bacterial cultures of M. W. Beijerinck. FEMS Microbiol. Ecol. 2011, 78:463-472.
-
(2011)
FEMS Microbiol. Ecol.
, vol.78
, pp. 463-472
-
-
Figge, M.J.1
Robertson, L.A.2
Ast, J.C.3
Dunlap, P.V.4
-
7
-
-
45749124657
-
TNT, a free program for phylogenetic analysis
-
Goloboff P.A., Farris J.S., Nixon K.C. TNT, a free program for phylogenetic analysis. Cladistics 2008, 24:774-786.
-
(2008)
Cladistics
, vol.24
, pp. 774-786
-
-
Goloboff, P.A.1
Farris, J.S.2
Nixon, K.C.3
-
8
-
-
17144462135
-
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
-
Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L., Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D., Ermolaeva M.D., Vamathevan J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L., Utterback T., Fleishmann R.D., Nierman W.C., White O., Salzberg S.L., Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 2000, 406:477-483.
-
(2000)
Nature
, vol.406
, pp. 477-483
-
-
Heidelberg, J.F.1
Eisen, J.A.2
Nelson, W.C.3
Clayton, R.A.4
Gwinn, M.L.5
Dodson, R.J.6
Haft, D.H.7
Hickey, E.K.8
Peterson, J.D.9
Umayam, L.10
Gill, S.R.11
Nelson, K.E.12
Read, T.D.13
Tettelin, H.14
Richardson, D.15
Ermolaeva, M.D.16
Vamathevan, J.17
Bass, S.18
Qin, H.19
Dragoi, I.20
Sellers, P.21
McDonald, L.22
Utterback, T.23
Fleishmann, R.D.24
Nierman, W.C.25
White, O.26
Salzberg, S.L.27
Smith, H.O.28
Colwell, R.R.29
Mekalanos, J.J.30
Venter, J.C.31
Fraser, C.M.32
more..
-
9
-
-
80055102339
-
The uncultured luminous symbiont of Anomalops katoptron (Beryciformes: Anomalopidae) represents a new bacterial genus
-
Hendry T.A., Dunlap P.V. The uncultured luminous symbiont of Anomalops katoptron (Beryciformes: Anomalopidae) represents a new bacterial genus. Mol. Phylogenet. Evol. 2011, 61:834-843.
-
(2011)
Mol. Phylogenet. Evol.
, vol.61
, pp. 834-843
-
-
Hendry, T.A.1
Dunlap, P.V.2
-
10
-
-
0001857117
-
16S/23S rRNA sequencing
-
John Wiley & Sons, Chichester, E. Stackebrandt, M. Goodfellow (Eds.)
-
Lane D.J. 16S/23S rRNA sequencing. Nucleic Acid Techniques in Bacterial Systematics 1991, 115-175. John Wiley & Sons, Chichester. E. Stackebrandt, M. Goodfellow (Eds.).
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
12
-
-
73149098333
-
Shifting the genomic gold standard for the prokaryotic species definition
-
Richter M., Rosselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:19126-19131.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 19126-19131
-
-
Richter, M.1
Rosselló-Móra, R.2
-
13
-
-
78650818074
-
Beijerinck and the bioluminescent bacteria: microbiological experiments in the late 19th and early 20th centuries
-
Robertson L.A., Figge M.J., Dunlap P.V. Beijerinck and the bioluminescent bacteria: microbiological experiments in the late 19th and early 20th centuries. FEMS Microbiol. Ecol. 2011, 75:185-194.
-
(2011)
FEMS Microbiol. Ecol.
, vol.75
, pp. 185-194
-
-
Robertson, L.A.1
Figge, M.J.2
Dunlap, P.V.3
-
14
-
-
20044369348
-
Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners
-
Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R., Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E., Stevens A., Visick K., Whistler C., Greenberg E.P. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Proc. Natl. Acad. Sci. U.S.A. 2005, 102:3004-3009.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 3004-3009
-
-
Ruby, E.G.1
Urbanowski, M.2
Campbell, J.3
Dunn, A.4
Faini, M.5
Gunsalus, R.6
Lostroh, P.7
Lupp, C.8
McCann, J.9
Millikan, D.10
Schaefer, A.11
Stabb, E.12
Stevens, A.13
Visick, K.14
Whistler, C.15
Greenberg, E.P.16
-
15
-
-
84892159415
-
Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov
-
Sawabe T., Ogura Y., Matsumura Y., Feng G., Amin A.R., Mino S., Nakagawa S., Sawabe T., Kumar R., Fukui Y., Satomi M., Matsushima R., Thompson F.L., Gomez-Gil B., Christen R., Maruyama F., Kurokawa K., Hayashi T. Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov. Front. Microbiol. 2013, 27:414.
-
(2013)
Front. Microbiol.
, vol.27
, pp. 414
-
-
Sawabe, T.1
Ogura, Y.2
Matsumura, Y.3
Feng, G.4
Amin, A.R.5
Mino, S.6
Nakagawa, S.7
Sawabe, T.8
Kumar, R.9
Fukui, Y.10
Satomi, M.11
Matsushima, R.12
Thompson, F.L.13
Gomez-Gil, B.14
Christen, R.15
Maruyama, F.16
Kurokawa, K.17
Hayashi, T.18
-
18
-
-
37449011476
-
Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov
-
Urbanczyk H., Ast J.C., Higgins M.J., Carson J., Dunlap P.V. Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov. Int. J. Syst. Evol. Microbiol. 2007, 57:2823-2829.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 2823-2829
-
-
Urbanczyk, H.1
Ast, J.C.2
Higgins, M.J.3
Carson, J.4
Dunlap, P.V.5
-
19
-
-
79251607127
-
Phylogeny, genomics, and symbiosis of. Photobacterium
-
Urbanczyk H., Ast J.C., Dunlap P.V. Phylogeny, genomics, and symbiosis of. Photobacterium. FEMS Microbiol. Rev. 2011, 35:324-342.
-
(2011)
FEMS Microbiol. Rev.
, vol.35
, pp. 324-342
-
-
Urbanczyk, H.1
Ast, J.C.2
Dunlap, P.V.3
-
20
-
-
47049083819
-
Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae
-
Urbanczyk H., Ast J.C., Kaeding A.J., Oliver J.D., Dunlap P.V. Phylogenetic analysis of the incidence of lux gene horizontal transfer in Vibrionaceae. J. Bacteriol. 2008, 190:3494-3504.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 3494-3504
-
-
Urbanczyk, H.1
Ast, J.C.2
Kaeding, A.J.3
Oliver, J.D.4
Dunlap, P.V.5
-
21
-
-
84863993441
-
Natural replacement of vertically inherited lux-rib genes of Photobacterium aquimaris by horizontally acquired homologues
-
Urbanczyk H., Furukawa T., Yamamoto Y., Dunlap P.V. Natural replacement of vertically inherited lux-rib genes of Photobacterium aquimaris by horizontally acquired homologues. Environ. Microbiol. Rep. 2012, 4:412-416.
-
(2012)
Environ. Microbiol. Rep.
, vol.4
, pp. 412-416
-
-
Urbanczyk, H.1
Furukawa, T.2
Yamamoto, Y.3
Dunlap, P.V.4
-
22
-
-
84879821513
-
Taxonomic revision of Harveyi clade bacteria (family Vibrionaceae) based on analysis of whole genome sequences
-
Urbanczyk H., Ogura Y., Hayashi T. Taxonomic revision of Harveyi clade bacteria (family Vibrionaceae) based on analysis of whole genome sequences. Int. J. Syst. Evol. Microbiol. 2013, 63:2742-2751.
-
(2013)
Int. J. Syst. Evol. Microbiol.
, vol.63
, pp. 2742-2751
-
-
Urbanczyk, H.1
Ogura, Y.2
Hayashi, T.3
-
23
-
-
84928230367
-
Contrasting inter- and intraspecies recombination patterns in the 'Harveyi clade' Vibrio collected over large spatial and temporal scales
-
Urbanczyk H., Ogura Y., Hayashi T. Contrasting inter- and intraspecies recombination patterns in the 'Harveyi clade' Vibrio collected over large spatial and temporal scales. Genome Biol. Evol. 2015, 7:71-80.
-
(2015)
Genome Biol. Evol.
, vol.7
, pp. 71-80
-
-
Urbanczyk, H.1
Ogura, Y.2
Hayashi, T.3
-
24
-
-
79958043460
-
Genome sequence of Photobacterium mandapamensis strain svers.1.1, the bioluminescent symbiont of the cardinal fish Siphamia versicolor
-
Urbanczyk H., Ogura Y., Hendry T.A., Gould A.L., Kiwaki N., Atkinson J.T., Hayashi T., Dunlap P.V. Genome sequence of Photobacterium mandapamensis strain svers.1.1, the bioluminescent symbiont of the cardinal fish Siphamia versicolor. J. Bacteriol. 2011, 193:3144-3145.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 3144-3145
-
-
Urbanczyk, H.1
Ogura, Y.2
Hendry, T.A.3
Gould, A.L.4
Kiwaki, N.5
Atkinson, J.T.6
Hayashi, T.7
Dunlap, P.V.8
-
25
-
-
84857790651
-
Vibrio jasicida sp. nov., a member of the Harveyi clade, isolated from marine animals (packhorse lobster, abalone and Atlantic salmon)
-
Yoshizawa S., Tsuruya Y., Fukui Y., Sawabe T., Yokota A., Kogure K., Higgins M., Carson J., Thompson F.L. Vibrio jasicida sp. nov., a member of the Harveyi clade, isolated from marine animals (packhorse lobster, abalone and Atlantic salmon). Int. J. Syst. Evol. Microbiol. 2012, 62:1864-1870.
-
(2012)
Int. J. Syst. Evol. Microbiol.
, vol.62
, pp. 1864-1870
-
-
Yoshizawa, S.1
Tsuruya, Y.2
Fukui, Y.3
Sawabe, T.4
Yokota, A.5
Kogure, K.6
Higgins, M.7
Carson, J.8
Thompson, F.L.9
|