Surveillance of extended-spectrum beta-lactamase-producing escherichia coli in dairy cattle farms in the nile delta, Egypt

Frontiers in Microbiology

Volumn 7, Issue JUL, 2016, Pages

  Braun, Sascha D ^a,b   Ahmed, Marwa F E ^c   El Adawy, Hosny ^d,e   Hotzel, Helmut ^d   Engelmann, Ines ^a,b   Wei, Daniel ^a,b   Monecke, Stefan ^a,b,f   Ehricht, Ralf ^a,b  

^a Alere Technologies GmbH   (Germany)

^b InfectoGnostics Research Campus ^*  (Germany)

^c Mansoura University   (Egypt)

^d FEDERAL RESEARCH INSTITUTE FOR ANIMAL HEALTH   (Germany)

^e Kafrelsheikh University   (Egypt)

^f DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

Author keywords

Carbapenemases; CRE; Dairy cattle; Egypt; ESBL; Escherichia coli; Genotype; Microarray

Indexed keywords

CARBAPENEM; CEPHALOSPORIN; EXTENDED SPECTRUM BETA LACTAMASE; GENOMIC DNA; IMIPENEM; MEROPENEM; QUINOLINE DERIVED ANTIINFECTIVE AGENT;

ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CONTROLLED STUDY; DAIRY CATTLE; DISEASE SURVEILLANCE; DNA EXTRACTION; DNA MICROARRAY; EGYPT; ESCHERICHIA COLI INFECTION; EXTENDED SPECTRUM BETA LACTAMASE PRODUCING ESCHERICHIA COLI; FARM ANIMAL; GENE IDENTIFICATION; GENOTYPE; MICROARRAY ANALYSIS; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; PHENOTYPE; PREVALENCE; RIVER ECOSYSTEM; SEROTYPE; SEROTYPING;

EID: 84983080800     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2016.01020     Document Type: Article

References (32)

1. Abdallah, H. M., Reuland, E. A., Wintermans, B. B., Al Naiemi, N., Koek, A., Abdelwahab, A. M., et al. (2015a). Extended-spectrum beta-lactamases and/or carbapenemases-producing Enterobacteriaceae isolated from retail chicken meat in Zagazig, Egypt. PLoS ONE 10:e0136052. doi: 10.1371/journal.pone.0136052
2. Abdallah, H. M., Wintermans, B. B., Reuland, E. A., Koek, A., al Naiemi, N., Ammar, A. M., et al. (2015b). Extended-spectrum beta-lactamase- and carbapenemase-producing Enterobacteriaceae isolated from Egyptian patients with suspected blood stream infection. PLoS ONE 10:e0128120. doi: 10.1371/journal.pone.0128120
3. Abraham, S., Chapman, T. A., Zhang, R., Chin, J., Mabbett, A. N., Totsika, M., et al. (2012). Molecular characterization of Escherichia coli strains that cause symptomatic and asymptomatic urinary tract infections. J. Clin. Microbiol. 50, 1027-1030. doi: 10.1128/JCM.06671-11
4. Aminov, R. I. (2011). Horizontal gene exchange in environmental microbiota. Front. Microbiol. 2:158. doi: 10.3389/fmicb.2011.00158
5. Berglund, B. (2015). Environmental dissemination of antibiotic resistance genes and correlation to anthropogenic contamination with antibiotics. Infect. Ecol. Epidemiol. 5:28564. doi: 10.3402/iee.v5.28564
6. Bradford, P. A. (2001). Extended-spectrum beta-lactamases in the 21st century: characterization, epidemiology, and detection of this important resistance threat. Clin. Microbiol. Rev. 14, 933-951. doi: 10.1128/CMR.14.4.933-951.2001
7. Braun, S. D., Monecke, S., Thurmer, A., Ruppelt, A., Makarewicz, O., Pletz, M., et al. (2014). Rapid identification of carbapenemase genes in gram-negative bacteria with an oligonucleotide microarray-based assay. PLoS ONE 9:e102232. doi: 10.1371/journal.pone.0102232
8. Brinas, L., Moreno, M. A., Zarazaga, M., Porrero, C., Saenz, Y., Garcia, M., et al. (2003). Detection of CMY-2, CTX-M-14, and SHV-12 beta-lactamases in Escherichia coli fecal-sample isolates from healthy chickens. Antimicrob. Agents Chemother. 47, 2056-2058. doi: 10.1128/AAC.47.6.2056-2058.2003
9. Brolund, A. (2014). Overview of ESBL-producing Enterobacteriaceae from a Nordic perspective. Infect. Ecol. Epidemiol. 4, 1-9. doi: 10.3402/iee.v4.24555
10. Carattoli, A. (2008). Animal reservoirs for extended spectrum beta-lactamase producers. Clin. Microbiol. Infect. 14(Suppl. 1), 117-123. doi: 10.1111/j.1469-0691.2007.01851.x
11. Chanawong, A., M'Zali, F. H., Heritage, J., Lulitanond, A., and Hawkey, P. M. (2001). SHV-12, SHV-5, SHV-2a and VEB-1 extended-spectrum beta-lactamases in Gram-negative bacteria isolated in a university hospital in Thailand. J. Antimicrob. Chemother. 48, 839-852. doi: 10.1093/jac/48.6.839
12. Dahms, C., Hubner, N. O., Kossow, A., Mellmann, A., Dittmann, K., and Kramer, A. (2015). Occurrence of ESBL-producing Escherichia coli in livestock and farm workers in Mecklenburg-Western Pomerania, Germany. PLoS ONE 10:e0143326. doi: 10.1371/journal.pone.0143326
13. Dahshan, H., Abd-Elall, A. M., Megahed, A. M., Abd-El-Kader, M. A., and Nabawy, E. E. (2015). Veterinary antibiotic resistance, residues, and ecological risks in environmental samples obtained from poultry farms, Egypt. Environ. Monit. Assess. 187, 1-10. doi: 10.1007/s10661-014-4218-3
14. Duan, R. S., Sit, T. H., Wong, S. S., Wong, R. C., Chow, K. H., Mak, G. C., et al. (2006). Escherichia coli producing CTX-M beta-lactamases in food animals in Hong Kong. Microb. Drug Resist. 12, 145-148. doi: 10.1089/mdr.2006.12.145
15. Giamarellou, H. (2005). Multidrug resistance in Gram-negative bacteria that produce extended-spectrum beta-lactamases (ESBLs). Clin. Microbiol. Infect. 11(Suppl. 4), 1-16. doi: 10.1111/j.1469-0691.2005.01160.x
16. Haftu, R., Taddele, H., Gugsa, G., and Kalayou, S. (2012). Prevalence, bacterial causes, and antimicrobial susceptibility profile of mastitis isolates from cows in large-scale dairy farms of Northern Ethiopia. Trop. Anim. Health Prod. 44, 1765-1771. doi: 10.1007/s11250-012-0135-z
17. Hansen, K. H., Bortolaia, V., Damborg, P., and Guardabassi, L. (2014). Strain diversity of CTX-M-producing Enterobacteriaceae in individual pigs: insights into the dynamics of shedding during the production cycle. Appl. Environ. Microbiol. 80, 6620-6626. doi: 10.1128/AEM.01730-14
18. Hartmann, A., Locatelli, A., Amoureux, L., Depret, G., Jolivet, C., Gueneau, E., et al. (2012). Occurrence of CTX-M producing Escherichia coli in soils, cattle, and farm environment in France (Burgundy Region). Front. Microbiol. 3:83. doi: 10.3389/fmicb.2012.00083
19. ISO (2001). ISO 16654:2001 Microbiology of Food and Animal Feeding Stuffs - Horizontal Method for the Detection of Escherichia coli O157 [Online]. Geneve. Available online at: http://www.iso.org/iso/iso_catalogue/catalogue_tc/catalogue_detail.htm?csnumber=29821 [Accessed].
20. Li, Y., Zheng, B., Zhu, S., Xue, F., and Liu, J. (2015). Antimicrobial susceptibility and molecular mechanisms of fosfomycin resistance in clinical Escherichia coli isolates in mainland China. PLoS ONE 10:e0135269. doi: 10.1371/journal.pone.0135269
21. Nordmann, P., Naas, T., and Poirel, L. (2011). Global spread of carbapenemase-producing Enterobacteriaceae. Emerging Infect. Dis. 17, 1791-1798. doi: 10.3201/eid1710.110655
22. Paterson, D. L., and Bonomo, R. A. (2005). Extended-spectrum beta-lactamases: a clinical update. Clin. Microbiol. Rev. 18, 657-686. doi: 10.1128/CMR.18.4.657-686.2005
23. Pitout, J. D., Nordmann, P., and Poirel, L. (2015). Carbapenemase-producing Klebsiella pneumoniae, a key pathogen set for global nosocomial dominance. Antimicrob. Agents Chemother. 59, 5873-5884. doi: 10.1128/AAC.01019-15
24. Poirel, L., Potron, A., and Nordmann, P. (2012). OXA-48-like carbapenemases: the phantom menace. J. Antimicrob. Chemother. 67, 1597-1606. doi: 10.1093/jac/dks121
25. Ramirez, M. S., and Tolmasky, M. E. (2010). Aminoglycoside modifying enzymes. Drug Resist. Updat. 13, 151-171. doi: 10.1016/j.drup.2010.08.003
26. Rawat, D., and Nair, D. (2010). Extended-spectrum beta-lactamases in gram negative bacteria. J. Glob. Infect. Dis. 2, 263-274. doi: 10.4103/0974-777X.68531
27. Schmid, A., Hörmansdorfer, S., Messelhausser, U., Käsbohrer, A., Sauter-Louis, C., and Mansfeld, R. (2013). Prevalence of extended-spectrum beta-lactamase-producing Escherichia coli on Bavarian dairy and beef cattle farms. Appl. Environ. Microbiol. 79, 3027-3032. doi: 10.1128/AEM.00204-13
28. Shaikh, S., Fatima, J., Shakil, S., Rizvi, S. M., and Kamal, M. A. (2015). Antibiotic resistance and extended spectrum beta-lactamases: types, epidemiology and treatment. Saudi J. Biol. Sci. 22, 90-101. doi: 10.1016/j.sjbs.2014.08.002
29. Takahata, S., Ida, T., Hiraishi, T., Sakakibara, S., Maebashi, K., Terada, S., et al. (2010). Molecular mechanisms of fosfomycin resistance in clinical isolates of Escherichia coli. Int. J. Antimicrob. Agents 35, 333-337. doi: 10.1016/j.ijantimicag.2009.11.011
30. Valentin, L., Sharp, H., Hille, K., Seibt, U., Fischer, J., Pfeifer, Y., et al. (2014). Subgrouping of ESBL-producing Escherichia coli from animal and human sources: an approach to quantify the distribution of ESBL types between different reservoirs. Int. J. Med. Microbiol. 304, 805-816. doi: 10.1016/j.ijmm.2014.07.015
31. WHO (2013). Consultative Meeting on Antimicrobial Resistance for Countries in the Eastern Mediterranean Region: From Policies to Action [Online]. Sharm El Sheikh. Available online at: http://applications.emro.who.int/docs/IC_Meet_Rep_2014_EN_15210.pdf [Accessed 2013].
32. Wittum, T. E., Mollenkopf, D. F., Daniels, J. B., Parkinson, A. E., Mathews, J. L., Fry, P. R., et al. (2010). CTX-M-type extended-spectrum beta-lactamases present in Escherichia coli from the feces of cattle in Ohio, United States. Foodborne Pathog. Dis. 7, 1575-1579. doi: 10.1089/fpd.2010.0615