Spatial normalization of brain images and beyond

Medical Image Analysis

Volumn 33, Issue , 2016, Pages 127-133

  Mangin, J F ^a,i   Lebenberg, J ^a,f   Lefranc, S ^a,i   Labra, N ^a   Auzias, G ^b   Labit, M ^a,i   Guevara, M ^c   Mohlberg, H ^d   Roca, P ^e   Guevara, P ^c   Dubois, J ^f   Leroy, F ^f   Dehaene Lambertz, G ^f   Cachia, A ^g   Dickscheid, T ^d   Coulon, O ^b   Poupon, C ^a,i   Riviere D ^a,i   Amunts, K ^d,h   Sun, Z Y ^a,i  

^a UNIVERSITÉ PARIS SACLAY   (France)

^b AIX MARSEILLE UNIVERSITÉ   (France)

^c UNIVERSITY OF CONCEPCIÓN   (Chile)

^d FORSCHUNGSZENTRUM JÜLICH   (Germany)

^e CENTRE HOSPITALIER SAINTE ANNE   (France)

^f DIF   (France)

^g Administrateur de l Institut universitaire de France   (France)

^h HEINRICH HEINE UNIVERSITY   (Germany)

ⁱ CATI Multicenter Neuroimaging Platform   (France)

Author keywords

Connectome; Cortical folding pattern; Diffeomorphism; Spatial normalization

Indexed keywords

ALGORITHM; BRAIN MAPPING; CONNECTOME; DELUSION; DIFFUSION WEIGHTED IMAGING; EDITORIAL; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; NEUROIMAGING; PRIORITY JOURNAL; RESTING STATE NETWORK; SURFACE AREA; SURFACE PROPERTY; BRAIN; CYTOLOGY; DIAGNOSTIC IMAGING; IMAGE PROCESSING; NUCLEAR MAGNETIC RESONANCE IMAGING; PROCEDURES;

ALGORITHMS; BRAIN; BRAIN MAPPING; CONNECTOME; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING;

EID: 84982168505     PISSN: 13618415     EISSN: 13618423     Source Type: Journal    
DOI: 10.1016/j.media.2016.06.008     Document Type: Editorial

References (27)

1. Amunts, K, Zilles, K, Architectonic mapping of the human brain beyond brodmann. Neuron 88 (2015), 1086–1107.
2. Amunts, K, Lepage, C, Borgeat, L, Mohlberg, H, Dickscheid, T, Rousseau, M, Bludau, S, Bazin, P.L, Lewis, L.B, Oros-Peusquens, A.M, Shah, N.J, Lippert, T, Zilles, K, Evans, AC, BigBrain: an ultrahigh-resolution 3D human brain model. Science 340 (2013), 1472–1475.
3. Ashburner, J, SPM: a history. Neuroimage 62 (2012), 791–800.
4. Assaf, Y, et al. The CONNECT project: combining macro- and micro-structure. Neuroimage 80 (2013), 273–282.
5. Auzias, G, Colliot, O, Glaunès, J.A, Perrot, M, Mangin, J.F, A, Trouvé, Baillet, S, Diffeomorphic brain registration under exhaustive sulcal constraints. IEEE Trans. Med. Imaging 30 (2011), 1214–1227.
6. Auzias, G, Lefèvre, J, Le Troter, A, Fischer, C, Perrot, M, Régis, J, Coulon, O, Model-driven harmonic parameterization of the cortical surface: HIP-HOP. IEEE Trans. Med. Imaging 32 (2013), 873–887.
7. Axer, M, Amunts, K, Grässel, D, Palm, C, Dammers, J, Axer, H, Pietrzyk, U, Zilles, K, A novel approach to the human connectome: ultra-high resolution mapping of fiber tracts in the brain. Neuroimage 54 (2011), 1091–1101.
8. Crick, F, Jones, E, Backwardness of human neuroanatomy. Nature 361 (1993), 109–110.
9. de Juan Romero, C, Bruder, C, Tomasello, U, Sanz-Anquela, J.M, Borrell, V, Discrete domains of gene expression in germinal layers distinguish the development of gyrencephaly. EMBO J 34 (2015), 1859–1874.
10. Fischl, B, Rajendran, N, Busa, E, Augustinack, J, Hinds, O, Yeo, B.T, Mohlberg, H, Amunts, K, Zilles, K, Cortical folding patterns and predicting cytoarchitecture. Cereb. Cortex 18 (2008), 1973–1980.
11. Fonov, V, Evans, A.C, Botteron, K, Almli, C.R, McKinstry, R.C, Collins, D.L, Group BDC. Unbiased average age-appropriate atlases for pediatric studies. Neuroimage 54 (2011), 313–327.
12. Foubet, O, Toro, R, Mechanical morphogenesis and the development of neocortical organisation. http://dxdoiorg/101101/021311, 2016.
13. Guevara, P, Duclap, D, Poupon, C, Marrakchi-Kacem, L, Fillard, P, Le Bihan, D, Leboyer, M, Houenou, J, Mangin, J.F, Automatic fiber bundle segmentation in massive tractography datasets using a multi-subject bundle atlas. Neuroimage 61 (2012), 1083–1099.
14. Lefranc, S, Roca, P, Perrot, M, Poupon, C, Le Bihan, D, Mangin, J.F, Rivière, D, Groupwise connectivity-based parcellation of the whole human cortical surface using watershed-driven dimension reduction. Med. Image Anal. 30 (2016), 11–29.
15. Mangin, J-F, Auzias, G, Coulon, O, Sun, Z.Y, Rivière, D, Régis, J, Sulci as Landmarks. Toga, Arthur W., (eds.) Brain Mapping: An Encyclopedic Reference, 2015, Academic Press: Elsevier, 45–52.
16. Mangin, J-F, Perrot, M, Operto, G, Cachia, A, Fischer, C, Lefèvre, J, Rivière, D, Sulcus Identification and Labeling. Toga, AW, (eds.) Brain Mapping: An Encyclopedic Reference, 2015, Academic Press: Elsevier, 365–371.
17. Miller, M.I, Christensen, G.E, Amit, Y, Grenander, U, Mathematical textbook of deformable neuroanatomies. Proc. Natl. Acad. Sci. U.S.A. 90 (1993), 11944–11948.
18. Perrot, M, Rivière, D, Mangin, J.F, Cortical sulci recognition and spatial normalization. Med. Image Anal. 15 (2011), 529–550.
19. Robinson, E.C, Jbabdi, S, Glasserlabel, M.F, Andersson, J, Burgess, G.C, Harms, M.P, Smith, S.M, Van Essen, D.C, Jenkinson, M, MSM: a new flexible framework for multimodal surface matching. Neuroimage, 2014.
20. Roca, P, Tucholka, A, Rivière, D, Guevara, P, Poupon, C, Mangin, JF, Inter-subject connectivity-based parcellation of a patch of cerebral cortex. Med. Image Comput. Comput. Assist. Interv. 13 (2010), 347–354.
21. Sporns, O, Tononi, G, Kötter, R, The human connectome: a structural description of the human brain. PLoS Comput. Biol., 1, 2005, e42.
22. Sun, Z, Perrot, M, Tucholka, A, Rivière, D, Mangin, J-F, Constructing a dictionary of human brain folding patterns. Medical Image Comput. Comput.-Assist. Interv.–MICCAI 2009 (2009), 117–124.
23. Sun, Z.Y, Pinel, P, Rivière, D, Moreno, A, Dehaene, S, Mangin, J.F, Linking morphological and functional variability in hand movement and silent reading. Brain Struct. Funct, 2016.
24. Sun, Z.Y, Klöppel, S, Rivière, D, Perrot, M, Frackowiak, R, Siebner, H, Mangin, J-F, The effect of handedness on the shape of the central sulcus. Neuroimage 60 (2012), 332–339.
25. Tallinen, T, Chung, J.Y, Biggins, J.S, Mahadevan, L, Gyrification from constrained cortical expansion. Proc. Natl. Acad. Sci. U.S.A. 111 (2014), 12667–12672.
26. Van Essen, D.C, Donahue, C, Dierker, D.L, Glasser, M.F, Parcellations and connectivity patterns in human and macaque cerebral cortex. Kennedy, H., Van Essen, D.C., Christen, Y., (eds.) Micro-, Meso- and Macro-Connectomics of the Brain research and perspectives in neurosciences, 2016, Springer, 89–106.
27. Yeo, B.T, Sabuncu, M.R, Vercauteren, T, Holt, D.J, Amunts, K, Zilles, K, Golland, P, Fischl, B, Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex. IEEE Trans. Med. Imaging 29 (2010), 1424–1441.