-
1
-
-
82255181181
-
Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes
-
Altun, M., H.B. Kramer, L.I. Willems, J.L. McDermott, C.A. Leach, S.J. Goldenberg, K.G.S. Kumar, R. Konietzny, R. Fischer, E. Kogan, et al. 2011. Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes. Chem. Biol. 18:1401-1412. http ://dx.doi.org /10.1016 /j.chembiol.2011.08.018
-
(2011)
Chem. Biol.
, vol.18
, pp. 1401-1412
-
-
Altun, M.1
Kramer, H.B.2
Willems, L.I.3
McDermott, J.L.4
Leach, C.A.5
Goldenberg, S.J.6
Kumar, K.G.S.7
Konietzny, R.8
Fischer, R.9
Kogan, E.10
-
2
-
-
84655167059
-
Cyclic amino acid linkers stabilizing key loops of brain derived neurotrophic factor
-
Baeza, J.L., B.G. de la Torre, C.M. Santiveri, R.D. Almeida, M.T. García-López, G. Gerona-Navarro, S.R. Jaffrey, M.Á. Jiménez, D. Andreu, R. González- Muñiz, and M. Martín-Martínez. 2012. Cyclic amino acid linkers stabilizing key loops of brain derived neurotrophic factor. Bioorg. Med. Chem. Lett. 22:444-448. http ://dx.doi.org /10.1016 /j.bmcl.2011.10.107
-
(2012)
Bioorg. Med. Chem. Lett.
, vol.22
, pp. 444-448
-
-
Baeza, J.L.1
de la Torre, B.G.2
Santiveri, C.M.3
Almeida, R.D.4
García-López, M.T.5
Gerona-Navarro, G.6
Jaffrey, S.R.7
Jiménez, M.Á.8
Andreu, D.9
González-Muñiz, R.10
Martín-Martínez, M.11
-
3
-
-
84878951512
-
Diabetes alters KIF1A and KIF5B motor proteins in the hippocampus
-
Baptista, F.I., M.J. Pinto, F. Elvas, R.D. Almeida, and A.F. Ambrósio. 2013. Diabetes alters KIF1A and KIF5B motor proteins in the hippocampus. PLoS One. 8:e65515. http ://dx.doi.org /10.1371 /journal.pone.0065515
-
(2013)
PLoS One.
, vol.8
-
-
Baptista, F.I.1
Pinto, M.J.2
Elvas, F.3
Almeida, R.D.4
Ambrósio, A.F.5
-
4
-
-
84905226941
-
Diabetes induces changes in KIF1A, KIF5B and dynein distribution in the rat retina: implications for axonal transport
-
Baptista, F.I., M.J. Pinto, F. Elvas, T. Martins, R.D. Almeida, and A.F. Ambrósio. 2014. Diabetes induces changes in KIF1A, KIF5B and dynein distribution in the rat retina: implications for axonal transport. Exp. Eye Res. 127:91-103. http ://dx.doi.org /10.1016 /j.exer.2014.07.011
-
(2014)
Exp. Eye Res.
, vol.127
, pp. 91-103
-
-
Baptista, F.I.1
Pinto, M.J.2
Elvas, F.3
Martins, T.4
Almeida, R.D.5
Ambrósio, A.F.6
-
5
-
-
77956333111
-
Role of the proteasome in excitotoxicity-induced cleavage of glutamic acid decarboxylase in cultured hippocampal neurons
-
Baptista, M.S., C.V. Melo, M. Armelão, D. Herrmann, D.O. Pimentel, G. Leal, M.V. Caldeira, B.A. Bahr, M. Bengtson, R.D. Almeida, and C.B. Duarte. 2010. Role of the proteasome in excitotoxicity-induced cleavage of glutamic acid decarboxylase in cultured hippocampal neurons. PLoS One. 5:e10139. http ://dx.doi.org /10.1371 /journal.pone.0010139
-
(2010)
PLoS One.
, vol.5
-
-
Baptista, M.S.1
Melo, C.V.2
Armelão, M.3
Herrmann, D.4
Pimentel, D.O.5
Leal, G.6
Caldeira, M.V.7
Bahr, B.A.8
Bengtson, M.9
Almeida, R.D.10
Duarte, C.B.11
-
6
-
-
78650962524
-
Deconstruction for reconstruction: the role of proteolysis in neural plasticity and disease
-
Bingol, B., and M. Sheng. 2011. Deconstruction for reconstruction: the role of proteolysis in neural plasticity and disease. Neuron. 69:22-32. http ://dx .doi.org /10.1016 /j.neuron.2010.11.006
-
(2011)
Neuron.
, vol.69
, pp. 22-32
-
-
Bingol, B.1
Sheng, M.2
-
7
-
-
33845764296
-
A guided tour into subcellular colocalization analysis in light microscopy
-
Bolte, S., and F.P. Cordelières. 2006. A guided tour into subcellular colocalization analysis in light microscopy. J. Microsc. 224:213-232. http ://dx.doi.org /10.1111 /j.1365 -2818.2006.01706.x
-
(2006)
J. Microsc.
, vol.224
, pp. 213-232
-
-
Bolte, S.1
Cordelières, F.P.2
-
8
-
-
84868560715
-
Excitotoxic stimulation downregulates the ubiquitin-proteasome system through activation of NMDA receptors in cultured hippocampal neurons
-
Caldeira, M.V., M. Curcio, G. Leal, I.L. Salazar, M. Mele, A.R.A. Santos, C.V. Melo, P. Pereira, L.M.T. Canzoniero, and C.B. Duarte. 2013. Excitotoxic stimulation downregulates the ubiquitin-proteasome system through activation of NMDA receptors in cultured hippocampal neurons. Biochim. Biophys. Acta. 1832:263-274. http ://dx.doi.org /10.1016 /j .bbadis.2012.10.009
-
(2013)
Biochim. Biophys. Acta.
, vol.1832
, pp. 263-274
-
-
Caldeira, M.V.1
Curcio, M.2
Leal, G.3
Salazar, I.L.4
Mele, M.5
Santos, A.R.A.6
Melo, C.V.7
Pereira, P.8
Canzoniero, L.M.T.9
Duarte, C.B.10
-
9
-
-
69749110327
-
The proteasome-associated deubiquitinating enzyme Usp14 is essential for the maintenance of synaptic ubiquitin levels and the development of neuromuscular junctions
-
Chen, P.C., L.N. Qin, X.M. Li, B.J. Walters, J.A. Wilson, L. Mei, and S.M. Wilson. 2009. The proteasome-associated deubiquitinating enzyme Usp14 is essential for the maintenance of synaptic ubiquitin levels and the development of neuromuscular junctions. J. Neurosci. 29:10909-10919. http ://dx.doi.org /10.1523 /JNE URO SCI.2635 -09.2009
-
(2009)
J. Neurosci.
, vol.29
, pp. 10909-10919
-
-
Chen, P.C.1
Qin, L.N.2
Li, X.M.3
Walters, B.J.4
Wilson, J.A.5
Mei, L.6
Wilson, S.M.7
-
10
-
-
82555200901
-
Ubiquitin homeostasis is critical for synaptic development and function
-
Chen, P.C., B.J. Bhattacharyya, J. Hanna, H. Minkel, J.A. Wilson, D. Finley, R.J. Miller, and S.M. Wilson. 2011. Ubiquitin homeostasis is critical for synaptic development and function. J. Neurosci. 31:17505-17513. http :// dx.doi.org /10.1523 /JNE URO SCI.2922 -11.2011
-
(2011)
J. Neurosci.
, vol.31
, pp. 17505-17513
-
-
Chen, P.C.1
Bhattacharyya, B.J.2
Hanna, J.3
Minkel, H.4
Wilson, J.A.5
Finley, D.6
Miller, R.J.7
Wilson, S.M.8
-
11
-
-
84886919727
-
Cellular and molecular mechanisms underlying presynapse formation
-
Chia, P.H., P. Li, and K. Shen. 2013. Cellular and molecular mechanisms underlying presynapse formation. J. Cell Biol. 203:11-22. http ://dx.doi .org /10.1083 /jcb.201307020
-
(2013)
J. Cell Biol.
, vol.203
, pp. 11-22
-
-
Chia, P.H.1
Li, P.2
Shen, K.3
-
12
-
-
84901832222
-
Activation of microglia bolsters synapse formation
-
Cristovão, G., M.J. Pinto, R.A. Cunha, R.D. Almeida, and C.A. Gomes. 2014. Activation of microglia bolsters synapse formation. Front. Cell. Neurosci. 8:153. http ://dx.doi.org /10.3389 /fncel.2014.00153
-
(2014)
Front. Cell. Neurosci.
, vol.8
, pp. 153
-
-
Cristovão, G.1
Pinto, M.J.2
Cunha, R.A.3
Almeida, R.D.4
Gomes, C.A.5
-
13
-
-
0034023407
-
Shortlived green fluorescent proteins for quantifying ubiquitin/proteasomedependent proteolysis in living cells
-
Dantuma, N.P., K. Lindsten, R. Glas, M. Jellne, and M.G. Masucci. 2000. Shortlived green fluorescent proteins for quantifying ubiquitin/proteasomedependent proteolysis in living cells. Nat. Biotechnol. 18:538-543. http :// dx.doi.org /10.1038 /75406
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 538-543
-
-
Dantuma, N.P.1
Lindsten, K.2
Glas, R.3
Jellne, M.4
Masucci, M.G.5
-
14
-
-
0035954743
-
Ubiquitination-dependent mechanisms regulate synaptic growth and function
-
DiAntonio, A., A.P. Haghighi, S.L. Portman, J.D. Lee, A.M. Amaranto, and C.S. Goodman. 2001. Ubiquitination-dependent mechanisms regulate synaptic growth and function. Nature. 412:449-452. http ://dx.doi.org /10 .1038 /35086595
-
(2001)
Nature.
, vol.412
, pp. 449-452
-
-
DiAntonio, A.1
Haghighi, A.P.2
Portman, S.L.3
Lee, J.D.4
Amaranto, A.M.5
Goodman, C.S.6
-
15
-
-
34548044548
-
Spatial regulation of an E3 ubiquitin ligase directs selective synapse elimination
-
Ding, M., D. Chao, G. Wang, and K. Shen. 2007. Spatial regulation of an E3 ubiquitin ligase directs selective synapse elimination. Science. 317:947-951. http ://dx.doi.org /10.1126 /science.1145727
-
(2007)
Science.
, vol.317
, pp. 947-951
-
-
Ding, M.1
Chao, D.2
Wang, G.3
Shen, K.4
-
16
-
-
70350389831
-
Regulation of the proteasome by neuronal activity and calcium/ calmodulin-dependent protein kinase II
-
Djakovic, S.N., L.A. Schwarz, B. Barylko, G.N. DeMartino, and G.N. Patrick. 2009. Regulation of the proteasome by neuronal activity and calcium/ calmodulin-dependent protein kinase II. J. Biol. Chem. 284:26655-26665. http ://dx.doi.org /10.1074 /jbc.M109.021956
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 26655-26665
-
-
Djakovic, S.N.1
Schwarz, L.A.2
Barylko, B.3
DeMartino, G.N.4
Patrick, G.N.5
-
17
-
-
78650300883
-
c-IAP1 and UbcH5 promote K11-linked polyubiquitination of RIP1 in TNF signalling
-
Dynek, J.N., T. Goncharov, E.C. Dueber, A.V. Fedorova, A. Izrael-Tomasevic, L. Phu, E. Helgason, W.J. Fairbrother, K. Deshayes, D.S. Kirkpatrick, and D. Vucic. 2010. c-IAP1 and UbcH5 promote K11-linked polyubiquitination of RIP1 in TNF signalling. EMBO J. 29:4198-4209. http ://dx.doi.org /10.1038 /emboj.2010.300
-
(2010)
EMBO J.
, vol.29
, pp. 4198-4209
-
-
Dynek, J.N.1
Goncharov, T.2
Dueber, E.C.3
Fedorova, A.V.4
Izrael-Tomasevic, A.5
Phu, L.6
Helgason, E.7
Fairbrother, W.J.8
Deshayes, K.9
Kirkpatrick, D.S.10
Vucic, D.11
-
18
-
-
0027984312
-
Synaptogenesis in hippocampal cultures: evidence indicating that axons and dendrites become competent to form synapses at different stages of neuronal development
-
Fletcher, T.L., P. De Camilli, and G. Banker. 1994. Synaptogenesis in hippocampal cultures: evidence indicating that axons and dendrites become competent to form synapses at different stages of neuronal development. J. Neurosci. 14:6695-6706.
-
(1994)
J. Neurosci.
, vol.14
, pp. 6695-6706
-
-
Fletcher, T.L.1
De Camilli, P.2
Banker, G.3
-
19
-
-
3242696232
-
Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain
-
Flick, K., I. Ouni, J.A. Wohlschlegel, C. Capati, W.H. McDonald, J.R. Yates, and P. Kaiser. 2004. Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain. Nat. Cell Biol. 6:634-641. http ://dx.doi.org /10.1038 /ncb1143
-
(2004)
Nat. Cell Biol.
, vol.6
, pp. 634-641
-
-
Flick, K.1
Ouni, I.2
Wohlschlegel, J.A.3
Capati, C.4
McDonald, W.H.5
Yates, J.R.6
Kaiser, P.7
-
20
-
-
79955780605
-
A novel strategy to isolate ubiquitin conjugates reveals wide role for ubiquitination during neural development.
-
Franco, M., N.T. Seyfried, A.H. Brand, J. Peng, and U. Mayor. 2011. A novel strategy to isolate ubiquitin conjugates reveals wide role for ubiquitination during neural development. Mol. Cell. Proteomics. 10. http ://dx.doi.org /10.1074 /mcp.M110.002188
-
(2011)
Mol. Cell. Proteomics
, pp. 10
-
-
Franco, M.1
Seyfried, N.T.2
Brand, A.H.3
Peng, J.4
Mayor, U.5
-
21
-
-
0033666317
-
Assembly of new individual excitatory synapses: time course and temporal order of synaptic molecule recruitment
-
Friedman, H.V., T. Bresler, C.C. Garner, and N.E. Ziv. 2000. Assembly of new individual excitatory synapses: time course and temporal order of synaptic molecule recruitment. Neuron. 27:57-69. http ://dx.doi.org /10 .1016 /S0896 -6273(00)00009 -X
-
(2000)
Neuron.
, vol.27
, pp. 57-69
-
-
Friedman, H.V.1
Bresler, T.2
Garner, C.C.3
Ziv, N.E.4
-
22
-
-
78149276256
-
Contribution of lysine 11-linked ubiquitination to MIR2-mediated major histocompatibility complex class I internalization
-
Goto, E., Y. Yamanaka, A. Ishikawa, M. Aoki-Kawasumi, M. Mito-Yoshida, M. Ohmura-Hoshino, Y. Matsuki, M. Kajikawa, H. Hirano, and S. Ishido. 2010. Contribution of lysine 11-linked ubiquitination to MIR2-mediated major histocompatibility complex class I internalization. J. Biol. Chem. 285:35311-35319. http ://dx.doi.org /10.1074 /jbc.M110.112763
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 35311-35319
-
-
Goto, E.1
Yamanaka, Y.2
Ishikawa, A.3
Aoki-Kawasumi, M.4
Mito-Yoshida, M.5
Ohmura-Hoshino, M.6
Matsuki, Y.7
Kajikawa, M.8
Hirano, H.9
Ishido, S.10
-
23
-
-
79551675617
-
The EDD E3 ubiquitin ligase ubiquitinates and up-regulates ß-catenin
-
Hay-Koren, A., M. Caspi, A. Zilberberg, and R. Rosin-Arbesfeld. 2011. The EDD E3 ubiquitin ligase ubiquitinates and up-regulates ß-catenin. Mol. Biol. Cell. 22:399-411. http ://dx.doi.org /10.1091 /mbc.E10 -05 -0440
-
(2011)
Mol. Biol. Cell.
, vol.22
, pp. 399-411
-
-
Hay-Koren, A.1
Caspi, M.2
Zilberberg, A.3
Rosin-Arbesfeld, R.4
-
24
-
-
80054960982
-
In vivo imaging of intersynaptic vesicle exchange using VGL UT1Venus knock-in mice
-
Herzog, E., F. Nadrigny, K. Silm, C. Biesemann, I. Helling, T. Bersot, H. Steffens, R. Schwartzmann, U.V. Nägerl, S. El Mestikawy, et al. 2011. In vivo imaging of intersynaptic vesicle exchange using VGL UT1Venus knock-in mice. J. Neurosci. 31:15544-15559. http ://dx.doi.org /10.1523 /JNE URO SCI.2073 -11.2011
-
(2011)
J. Neurosci.
, vol.31
, pp. 15544-15559
-
-
Herzog, E.1
Nadrigny, F.2
Silm, K.3
Biesemann, C.4
Helling, I.5
Bersot, T.6
Steffens, H.7
Schwartzmann, R.8
Nägerl, U.V.9
El Mestikawy, S.10
-
25
-
-
84876903554
-
Negative regulation of 26S proteasome stability via calpain-mediated cleavage of Rpn10 subunit upon mitochondrial dysfunction in neurons
-
Huang, Q., H. Wang, S.W. Perry, and M.E. Figueiredo-Pereira. 2013. Negative regulation of 26S proteasome stability via calpain-mediated cleavage of Rpn10 subunit upon mitochondrial dysfunction in neurons. J. Biol. Chem. 288:12161-12174. http ://dx.doi.org /10.1074 /jbc.M113.464552
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 12161-12174
-
-
Huang, Q.1
Wang, H.2
Perry, S.W.3
Figueiredo-Pereira, M.E.4
-
26
-
-
84876886904
-
Regulation of DNA damage responses by ubiquitin and SUMO
-
Jackson, S.P., and D. Durocher. 2013. Regulation of DNA damage responses by ubiquitin and SUMO. Mol. Cell. 49:795-807. http ://dx.doi.org /10.1016 /j .molcel.2013.01.017
-
(2013)
Mol. Cell.
, vol.49
, pp. 795-807
-
-
Jackson, S.P.1
Durocher, D.2
-
27
-
-
55849144680
-
Molecular mechanisms of presynaptic differentiation
-
Jin, Y., and C.C. Garner. 2008. Molecular mechanisms of presynaptic differentiation. Annu. Rev. Cell Dev. Biol. 24:237-262. http ://dx.doi.org /10.1146 /annurev.cellbio.23.090506.123417
-
(2008)
Annu. Rev. Cell Dev. Biol.
, vol.24
, pp. 237-262
-
-
Jin, Y.1
Garner, C.C.2
-
28
-
-
84858146420
-
Non-canonical ubiquitinbased signals for proteasomal degradation
-
Kravtsova-Ivantsiv, Y., and A. Ciechanover. 2012. Non-canonical ubiquitinbased signals for proteasomal degradation. J. Cell Sci. 125:539-548. http ://dx.doi.org /10.1242 /jcs.093567
-
(2012)
J. Cell Sci.
, vol.125
, pp. 539-548
-
-
Kravtsova-Ivantsiv, Y.1
Ciechanover, A.2
-
29
-
-
84864222562
-
Atypical ubiquitylation-the unexplored world of polyubiquitin beyond Lys48 and Lys63 linkages
-
Kulathu, Y., and D. Komander. 2012. Atypical ubiquitylation-the unexplored world of polyubiquitin beyond Lys48 and Lys63 linkages. Nat. Rev. Mol. Cell Biol. 13:508-523. http ://dx.doi.org /10.1038 /nrm3394
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, pp. 508-523
-
-
Kulathu, Y.1
Komander, D.2
-
30
-
-
3142708002
-
An SCF-like ubiquitin ligase complex that controls presynaptic differentiation
-
Liao, E.H., W. Hung, B. Abrams, and M. Zhen. 2004. An SCF-like ubiquitin ligase complex that controls presynaptic differentiation. Nature. 430:345-350. http ://dx.doi.org /10.1038 /nature02647
-
(2004)
Nature.
, vol.430
, pp. 345-350
-
-
Liao, E.H.1
Hung, W.2
Abrams, B.3
Zhen, M.4
-
31
-
-
70349883839
-
Rapid assembly of functional presynaptic boutons triggered by adhesive contacts
-
Lucido, A.L., F. Suarez Sanchez, P. Thostrup, A.V. Kwiatkowski, S. Leal-Ortiz, G. Gopalakrishnan, D. Liazoghli, W. Belkaid, R.B. Lennox, P. Grutter, et al. 2009. Rapid assembly of functional presynaptic boutons triggered by adhesive contacts. J. Neurosci. 29:12449-12466. http ://dx.doi.org /10 .1523 /JNE URO SCI.1381 -09.2009
-
(2009)
J. Neurosci.
, vol.29
, pp. 12449-12466
-
-
Lucido, A.L.1
Suarez Sanchez, F.2
Thostrup, P.3
Kwiatkowski, A.V.4
Leal-Ortiz, S.5
Gopalakrishnan, G.6
Liazoghli, D.7
Belkaid, W.8
Lennox, R.B.9
Grutter, P.10
-
32
-
-
31444438269
-
Synapse formation and mRNA localization in cultured Aplysia neurons
-
Lyles, V., Y. Zhao, and K.C. Martin. 2006. Synapse formation and mRNA localization in cultured Aplysia neurons. Neuron. 49:349-356. http ://dx .doi.org /10.1016 /j.neuron.2005.12.029
-
(2006)
Neuron.
, vol.49
, pp. 349-356
-
-
Lyles, V.1
Zhao, Y.2
Martin, K.C.3
-
33
-
-
0035902553
-
Genome-wide gene expression profiles of the developing mouse hippocampus
-
Mody, M., Y. Cao, Z. Cui, K.Y. Tay, A. Shyong, E. Shimizu, K. Pham, P. Schultz, D. Welsh, and J.Z. Tsien. 2001. Genome-wide gene expression profiles of the developing mouse hippocampus. Proc. Natl. Acad. Sci. USA. 98:8862-8867. http ://dx.doi.org /10.1073 /pnas.141244998
-
(2001)
Proc. Natl. Acad. Sci. USA.
, vol.98
, pp. 8862-8867
-
-
Mody, M.1
Cao, Y.2
Cui, Z.3
Tay, K.Y.4
Shyong, A.5
Shimizu, E.6
Pham, K.7
Schultz, P.8
Welsh, D.9
Tsien, J.Z.10
-
34
-
-
84866108712
-
Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis
-
Na, C.H., D.R. Jones, Y. Yang, X. Wang, Y. Xu, and J. Peng. 2012. Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis. J. Proteome Res. 11:4722-4732. http ://dx.doi.org /10.1021 /pr300536k
-
(2012)
J. Proteome Res.
, vol.11
, pp. 4722-4732
-
-
Na, C.H.1
Jones, D.R.2
Yang, Y.3
Wang, X.4
Xu, Y.5
Peng, J.6
-
35
-
-
13544262428
-
Regulation of a DLK-1 and p38 MAP kinase pathway by the ubiquitin ligase RPM-1 is required for presynaptic development
-
Nakata, K., B. Abrams, B. Grill, A. Goncharov, X. Huang, A.D. Chisholm, and Y. Jin. 2005. Regulation of a DLK-1 and p38 MAP kinase pathway by the ubiquitin ligase RPM-1 is required for presynaptic development. Cell. 120:407-420. http ://dx.doi.org /10.1016 /j.cell.2004.12.017
-
(2005)
Cell.
, vol.120
, pp. 407-420
-
-
Nakata, K.1
Abrams, B.2
Grill, B.3
Goncharov, A.4
Huang, X.5
Chisholm, A.D.6
Jin, Y.7
-
36
-
-
84901624359
-
Sensory neurons and osteoblasts: close partners in a microfluidic platform
-
Neto, E., C.J. Alves, D.M. Sousa, I.S. Alencastre, A.H. Lourenço, L. Leitão, H.R. Ryu, N.L. Jeon, R. Fernandes, P. Aguiar, et al. 2014. Sensory neurons and osteoblasts: close partners in a microfluidic platform. Integr Biol (Camb). 6:586-595. http ://dx.doi.org /10.1039 /c4ib00035h
-
(2014)
Integr Biol (Camb).
, vol.6
, pp. 586-595
-
-
Neto, E.1
Alves, C.J.2
Sousa, D.M.3
Alencastre, I.S.4
Lourenço, A.H.5
Leitão, L.6
Ryu, H.R.7
Jeon, N.L.8
Fernandes, R.9
Aguiar, P.10
-
37
-
-
49549117842
-
Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies
-
Newton, K., M.L. Matsumoto, I.E. Wertz, D.S. Kirkpatrick, J.R. Lill, J. Tan, D. Dugger, N. Gordon, S.S. Sidhu, F.A. Fellouse, et al. 2008. Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. Cell. 134:668-678. http ://dx.doi.org /10.1016 /j.cell.2008.07.039
-
(2008)
Cell.
, vol.134
, pp. 668-678
-
-
Newton, K.1
Matsumoto, M.L.2
Wertz, I.E.3
Kirkpatrick, D.S.4
Lill, J.R.5
Tan, J.6
Dugger, D.7
Gordon, N.8
Sidhu, S.S.9
Fellouse, F.A.10
-
38
-
-
0041706156
-
A proteomics approach to understanding protein ubiquitination
-
Peng, J., D. Schwartz, J.E. Elias, C.C. Thoreen, D. Cheng, G. Marsischky, J. Roelofs, D. Finley, and S.P. Gygi. 2003. A proteomics approach to understanding protein ubiquitination. Nat. Biotechnol. 21:921-926. http ://dx.doi.org /10.1038 /nbt849
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 921-926
-
-
Peng, J.1
Schwartz, D.2
Elias, J.E.3
Thoreen, C.C.4
Cheng, D.5
Marsischky, G.6
Roelofs, J.7
Finley, D.8
Gygi, S.P.9
-
39
-
-
78349291579
-
Changes in activity and kinetic properties of the proteasome in different rat organs during development and maturation.
-
Petersen, A., A. Honarvar, and M. Zetterberg. 2010. Changes in activity and kinetic properties of the proteasome in different rat organs during development and maturation. Curr. Gerontol. Geriatr. Res.2010. http ://dx .doi.org /10.1155 /2010 /230697
-
(2010)
Curr. Gerontol. Geriatr. Res
, vol.2010
-
-
Petersen, A.1
Honarvar, A.2
Zetterberg, M.3
-
40
-
-
84891958005
-
Ghrelin triggers the synaptic incorporation of AMPA receptors in the hippocampus
-
Ribeiro, L.F., T. Catarino, S.D. Santos, M. Benoist, J.F. van Leeuwen, J.A. Esteban, and A.L. Carvalho. 2014. Ghrelin triggers the synaptic incorporation of AMPA receptors in the hippocampus. Proc. Natl. Acad. Sci. USA. 111:E149-E158. http ://dx.doi.org /10.1073 /pnas.1313798111
-
(2014)
Proc. Natl. Acad. Sci. USA.
, vol.111
, pp. E149-E158
-
-
Ribeiro, L.F.1
Catarino, T.2
Santos, S.D.3
Benoist, M.4
van Leeuwen, J.F.5
Esteban, J.A.6
Carvalho, A.L.7
-
41
-
-
77749323170
-
Ubiquitination acutely regulates presynaptic neurotransmitter release in mammalian neurons
-
Rinetti, G.V., and F.E. Schweizer. 2010. Ubiquitination acutely regulates presynaptic neurotransmitter release in mammalian neurons. J. Neurosci. 30:3157-3166. http ://dx.doi.org /10.1523 /JNE URO SCI.3712 -09.2010
-
(2010)
J. Neurosci.
, vol.30
, pp. 3157-3166
-
-
Rinetti, G.V.1
Schweizer, F.E.2
-
42
-
-
84855879644
-
Protein monoubiquitination and polyubiquitination generate structural diversity to control distinct biological processes
-
Sadowski, M., R. Suryadinata, A.R. Tan, S.N.A. Roesley, and B. Sarcevic. 2012. Protein monoubiquitination and polyubiquitination generate structural diversity to control distinct biological processes. IUB MB Life. 64:136-142. http ://dx.doi.org /10.1002 /iub.589
-
(2012)
IUB MB Life.
, vol.64
, pp. 136-142
-
-
Sadowski, M.1
Suryadinata, R.2
Tan, A.R.3
Roesley, S.N.A.4
Sarcevic, B.5
-
43
-
-
58049088976
-
Think locally: control of ubiquitin-dependent protein degradation in neurons
-
Segref, A., and T. Hoppe. 2009. Think locally: control of ubiquitin-dependent protein degradation in neurons. EMBO Rep. 10:44-50. http ://dx.doi.org /10.1038 /embor.2008.229
-
(2009)
EMBO Rep.
, vol.10
, pp. 44-50
-
-
Segref, A.1
Hoppe, T.2
-
44
-
-
0038702377
-
Unitary assembly of presynaptic active zones from Piccolo-Bassoon transport vesicles
-
Shapira, M., R.G. Zhai, T. Dresbach, T. Bresler, V.I. Torres, E.D. Gundelfinger, N.E. Ziv, and C.C. Garner. 2003. Unitary assembly of presynaptic active zones from Piccolo-Bassoon transport vesicles. Neuron. 38:237-252. http ://dx.doi.org /10.1016 /S0896 -6273(03)00207 -1
-
(2003)
Neuron.
, vol.38
, pp. 237-252
-
-
Shapira, M.1
Zhai, R.G.2
Dresbach, T.3
Bresler, T.4
Torres, V.I.5
Gundelfinger, E.D.6
Ziv, N.E.7
Garner, C.C.8
-
45
-
-
33646139392
-
Activity-induced rapid synaptic maturation mediated by presynaptic cdc42 signaling
-
Shen, W., B. Wu, Z. Zhang, Y. Dou, Z.R. Rao, Y.R. Chen, and S. Duan. 2006. Activity-induced rapid synaptic maturation mediated by presynaptic cdc42 signaling. Neuron. 50:401-414. http ://dx.doi.org /10.1016 /j.neuron .2006.03.017
-
(2006)
Neuron.
, vol.50
, pp. 401-414
-
-
Shen, W.1
Wu, B.2
Zhang, Z.3
Dou, Y.4
Rao, Z.R.5
Chen, Y.R.6
Duan, S.7
-
46
-
-
78649339390
-
Assembling ligands in situ using bioorthogonal boronate ester synthesis
-
Shin, S.B.Y., R.D. Almeida, G. Gerona-Navarro, C. Bracken, and S.R. Jaffrey. 2010. Assembling ligands in situ using bioorthogonal boronate ester synthesis. Chem. Biol. 17:1171-1176. http ://dx.doi.org /10.1016 /j .chembiol.2010.09.008
-
(2010)
Chem. Biol.
, vol.17
, pp. 1171-1176
-
-
Shin, S.B.Y.1
Almeida, R.D.2
Gerona-Navarro, G.3
Bracken, C.4
Jaffrey, S.R.5
-
47
-
-
77953467032
-
Characterization of the brain 26S proteasome and its interacting proteins
-
Tai, H.C., H. Besche, A.L. Goldberg, and E.M. Schuman. 2010. Characterization of the brain 26S proteasome and its interacting proteins. Front. Mol. Neurosci. 3:1-19.
-
(2010)
Front. Mol. Neurosci.
, vol.3
, pp. 1-19
-
-
Tai, H.C.1
Besche, H.2
Goldberg, A.L.3
Schuman, E.M.4
-
48
-
-
0037418472
-
Microfluidic multicompartment device for neuroscience research
-
Taylor, A.M., S.W. Rhee, C.H. Tu, D.H. Cribbs, C.W. Cotman, and N.L. Jeon. 2003. Microfluidic multicompartment device for neuroscience research. Langmuir. 19:1551-1556. http ://dx.doi.org /10.1021 /la026417v
-
(2003)
Langmuir.
, vol.19
, pp. 1551-1556
-
-
Taylor, A.M.1
Rhee, S.W.2
Tu, C.H.3
Cribbs, D.H.4
Cotman, C.W.5
Jeon, N.L.6
-
49
-
-
23144439234
-
A microfluidic culture platform for CNS axonal injury, regeneration and transport
-
Taylor, A.M., M. Blurton-Jones, S.W. Rhee, D.H. Cribbs, C.W. Cotman, and N.L. Jeon. 2005. A microfluidic culture platform for CNS axonal injury, regeneration and transport. Nat. Methods. 2:599-605. http ://dx.doi.org /10.1038 /nmeth777
-
(2005)
Nat. Methods.
, vol.2
, pp. 599-605
-
-
Taylor, A.M.1
Blurton-Jones, M.2
Rhee, S.W.3
Cribbs, D.H.4
Cotman, C.W.5
Jeon, N.L.6
-
50
-
-
65549139891
-
Axonal mRNA in uninjured and regenerating cortical mammalian axons
-
Taylor, A.M., N.C. Berchtold, V.M. Perreau, C.H. Tu, N. Li Jeon, and C.W. Cotman. 2009. Axonal mRNA in uninjured and regenerating cortical mammalian axons. J. Neurosci. 29:4697-4707. http ://dx.doi.org /10.1523 /JNE URO SCI.6130 -08.2009
-
(2009)
J. Neurosci.
, vol.29
, pp. 4697-4707
-
-
Taylor, A.M.1
Berchtold, N.C.2
Perreau, V.M.3
Tu, C.H.4
Li Jeon, N.5
Cotman, C.W.6
-
51
-
-
77951883483
-
Microfluidic local perfusion chambers for the visualization and manipulation of synapses
-
Taylor, A.M., D.C. Dieterich, H.T. Ito, S.A. Kim, and E.M. Schuman. 2010. Microfluidic local perfusion chambers for the visualization and manipulation of synapses. Neuron. 66:57-68. http ://dx.doi.org /10.1016 /j.neuron.2010.03.022
-
(2010)
Neuron.
, vol.66
, pp. 57-68
-
-
Taylor, A.M.1
Dieterich, D.C.2
Ito, H.T.3
Kim, S.A.4
Schuman, E.M.5
-
52
-
-
84875478217
-
Axonal translation of ß-catenin regulates synaptic vesicle dynamics
-
Taylor, A.M., J. Wu, H.C. Tai, and E.M. Schuman. 2013. Axonal translation of ß-catenin regulates synaptic vesicle dynamics. J. Neurosci. 33:5584-5589. http ://dx.doi.org /10.1523 /JNE URO SCI.2944 -12.2013
-
(2013)
J. Neurosci.
, vol.33
, pp. 5584-5589
-
-
Taylor, A.M.1
Wu, J.2
Tai, H.C.3
Schuman, E.M.4
-
53
-
-
0034602845
-
Recognition of the polyubiquitin proteolytic signal
-
Thrower, J.S., L. Hoffman, M. Rechsteiner, and C.M. Pickart. 2000. Recognition of the polyubiquitin proteolytic signal. EMBO J. 19:94-102. http ://dx.doi .org /10.1093 /emboj /19.1.94
-
(2000)
EMBO J.
, vol.19
, pp. 94-102
-
-
Thrower, J.S.1
Hoffman, L.2
Rechsteiner, M.3
Pickart, C.M.4
-
54
-
-
84879844417
-
The role of ubiquitin-mediated pathways in regulating synaptic development, axonal degeneration and regeneration: insights from fly and worm
-
Tian, X., and C. Wu. 2013. The role of ubiquitin-mediated pathways in regulating synaptic development, axonal degeneration and regeneration: insights from fly and worm. J. Physiol. 591:3133-3143. http ://dx.doi.org /10.1113 /jphysiol.2012.247940
-
(2013)
J. Physiol.
, vol.591
, pp. 3133-3143
-
-
Tian, X.1
Wu, C.2
-
55
-
-
31744444244
-
Differential regulation of proteasome activity in the nucleus and the synaptic terminals
-
Upadhya, S.C., L. Ding, T.K. Smith, and A.N. Hegde. 2006. Differential regulation of proteasome activity in the nucleus and the synaptic terminals. Neurochem. Int. 48:296-305. http ://dx.doi.org /10.1016 /j .neuint.2005.11.003
-
(2006)
Neurochem. Int.
, vol.48
, pp. 296-305
-
-
Upadhya, S.C.1
Ding, L.2
Smith, T.K.3
Hegde, A.N.4
-
56
-
-
67649612733
-
Accuracy and precision in quantitative fluorescence microscopy
-
Waters, J.C. 2009. Accuracy and precision in quantitative fluorescence microscopy. J. Cell Biol. 185:1135-1148. http ://dx.doi.org /10.1083 /jcb .200903097
-
(2009)
J. Cell Biol.
, vol.185
, pp. 1135-1148
-
-
Waters, J.C.1
-
57
-
-
23944433636
-
Local translation of RhoA regulates growth cone collapse
-
Wu, K.Y., U. Hengst, L.J. Cox, E.Z. Macosko, A. Jeromin, E.R. Urquhart, and S.R. Jaffrey. 2005. Local translation of RhoA regulates growth cone collapse. Nature. 436:1020-1024. http ://dx.doi.org /10.1038 /nature03885
-
(2005)
Nature.
, vol.436
, pp. 1020-1024
-
-
Wu, K.Y.1
Hengst, U.2
Cox, L.J.3
Macosko, E.Z.4
Jeromin, A.5
Urquhart, E.R.6
Jaffrey, S.R.7
-
58
-
-
63049125531
-
Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation
-
Xu, P., D.M. Duong, N.T. Seyfried, D. Cheng, Y. Xie, J. Robert, J. Rush, M. Hochstrasser, D. Finley, and J. Peng. 2009. Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation. Cell. 137:133-145. http ://dx.doi.org /10.1016 /j.cell.2009 .01.041
-
(2009)
Cell.
, vol.137
, pp. 133-145
-
-
Xu, P.1
Duong, D.M.2
Seyfried, N.T.3
Cheng, D.4
Xie, Y.5
Robert, J.6
Rush, J.7
Hochstrasser, M.8
Finley, D.9
Peng, J.10
-
59
-
-
84874923254
-
Sumoylated MEF2A coordinately eliminates orphan presynaptic sites and promotes maturation of presynaptic boutons
-
Yamada, T., Y. Yang, J. Huang, G. Coppola, D.H. Geschwind, and A. Bonni. 2013. Sumoylated MEF2A coordinately eliminates orphan presynaptic sites and promotes maturation of presynaptic boutons. J. Neurosci. 33:4726-4740. http ://dx.doi.org /10.1523 /JNE URO SCI.4191 -12.2013
-
(2013)
J. Neurosci.
, vol.33
, pp. 4726-4740
-
-
Yamada, T.1
Yang, Y.2
Huang, J.3
Coppola, G.4
Geschwind, D.H.5
Bonni, A.6
-
60
-
-
0038487228
-
Function of the p97-Ufd1- Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains
-
Ye, Y., H.H. Meyer, and T.A. Rapoport. 2003. Function of the p97-Ufd1- Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains. J. Cell Biol. 162:71-84. http ://dx.doi.org /10.1083 /jcb.200302169
-
(2003)
J. Cell Biol.
, vol.162
, pp. 71-84
-
-
Ye, Y.1
Meyer, H.H.2
Rapoport, T.A.3
-
61
-
-
0035137129
-
Assembling the presynaptic active zone: a characterization of an active one precursor vesicle
-
Zhai, R.G., H. Vardinon-Friedman, C. Cases-Langhoff, B. Becker, E.D. Gundelfinger, N.E. Ziv, and C.C. Garner. 2001. Assembling the presynaptic active zone: a characterization of an active one precursor vesicle. Neuron. 29:131-143. http ://dx.doi.org /10.1016 /S0896 -6273(01)00185 -4
-
(2001)
Neuron.
, vol.29
, pp. 131-143
-
-
Zhai, R.G.1
Vardinon-Friedman, H.2
Cases-Langhoff, C.3
Becker, B.4
Gundelfinger, E.D.5
Ziv, N.E.6
Garner, C.C.7
-
62
-
-
0037851010
-
The ubiquitin proteasome system functions as an inhibitory constraint on synaptic strengthening
-
Zhao, Y., A.N. Hegde, and K.C. Martin. 2003. The ubiquitin proteasome system functions as an inhibitory constraint on synaptic strengthening. Curr. Biol. 13:887-898. http ://dx.doi.org /10.1016 /S0960 -9822(03)00332 -4
-
(2003)
Curr. Biol.
, vol.13
, pp. 887-898
-
-
Zhao, Y.1
Hegde, A.N.2
Martin, K.C.3
|