Bacterial endophytes of Trans-Ili Alatau region's plants as promising components of a microbial preparation for agricultural use

Acta Biochimica Polonica

Volumn 63, Issue 2, 2016, Pages 321-328

  Mukasheva, Togzhan ^a   Berzhanova, Ramza ^a   Ignatova, Lyudmila ^a   Omirbekova, Anel ^a   Brazhnikova, Yelena ^b   Sydykbekova, Raikhan ^a   Shigaeva, Maya ^a  

^a AL FARABI KAZAKH NATIONAL UNIVERSITY   (Kazakhstan)

^b Research Institute of Biology and Biotechnology Problems   (Kazakhstan)

Author keywords

3 indolylacetic acid; Bacterial endophytes; Barley; Growth stimulating effect; Plant growth promoting bacteria; Soybean

Indexed keywords

INDOLEACETIC ACID; INDOLEACETIC ACID DERIVATIVE; PHYTOHORMONE;

AGRICULTURE; BIOSYNTHESIS; CROP; ENDOPHYTE; GROWTH, DEVELOPMENT AND AGING; HORDEUM; ISOLATION AND PURIFICATION; KAZAKHSTAN; METABOLISM; MICROBIOLOGY; PLANT ROOT; SOYBEAN; STREPTOMYCES;

AGRICULTURE; CROPS, AGRICULTURAL; ENDOPHYTES; HORDEUM; INDOLEACETIC ACIDS; KAZAKHSTAN; PLANT GROWTH REGULATORS; PLANT ROOTS; SOYBEANS; STREPTOMYCES;

EID: 84976892838     PISSN: 0001527X     EISSN: 1734154X     Source Type: Journal    
DOI: 10.18388/abp.2015_1157     Document Type: Article

References (48)

1. Antoun H, Prévost D (2005) Ecology of plant growth promoting Rhizobacteria. In PGPR: Biocontrol and Biofertilization, Siddiqui ZA ed, pp 1-38. Dordrecht: Kluwer. http://dx.doi.org/10.1007/1-4020-4152-7_1.
2. Bacon CW, Hinton DM (2006) Bacterial endophytes: the endophytic niche, its occupants, and its utility. In Plant-Associated Bacteria, Gnanamanickam SS, ed, pp 155-194. Berlin: Springer-Verlag. http://dx.doi.org/10.1007/978-1-4020-4538-7_5.
3. Baldani V, Baldani J, Dobereiner J (2000) Inoculation of rice plants with the endophytic diazotrophs Herbaspirillum seropedicae and Burkholderia spp. Biol Fertil Soil 30: 485-491. http://dx.doi.org/10.1007/s003740050027.
4. Berg G, Eberl L, Hartmann A (2005) The rhizosphere as a reservoir for opportunistic human pathogenic bacteria. Environ Microbiol 7: 1673-1685. http://dx.doi.org/10.1002/9781118297674.ch116.
5. Brooks DS, Gonzalez CF, Appel DN, Filer TH (1994) Evaluation of endophytic bacteria as potential biological control agents for oak wilt. Biol Cont 4: 373-381. http://dx.doi.org/10.1006/bcon.1994.1047.
6. Caruso M, Colombo AL, Fedeli L, Pavesi A, Quaroni S, Saracchi M, Ventrella G (2000) Isolation of endophytic fungi and actinomycetestaxane producers. Ann Microbiology 50: 3-13.
7. Castro RA, Quecine MC, Lacava PT, Batista BD, Luvizotto DM, Marcon J, Ferreira A, Melo IS, Azevedo JL (2014) Isolation and enzyme bioprospection of endophytic bacteria associated with plants of Brazilian mangrove ecosystem. Springer Plus 3: 382-386.
8. Chebotar V, Malfanova N, Shcherbakov A, Ahtemova G, Borisov A, Lugtenberg B, Tikhonovich I (2015) Endophytic bacteria in microbial preparations that improve plant development (Review). Appl Biochem Microbiol 51: 271-277. http://dx.doi.org/10.1134/S0003683815030059.
9. Eckert B, Weber OB, Kirchhof G, Hilbritter A, Stoffels M, Hartmann A (2001) Azospirillumdoebereinerea species, a nitrogen-fixing bacterium associated with the C4-grass Miscanthus. Int J System Evol Microbiol 51: 17-26.
10. Frey-Klett P, Chavatte M, Clausse ML, Courrier S, Roux CL, Raaijmakers J (2005) Ecto-mycorrhizal symbiosis affects functional diversity of rhizosphere fluorescent pseudomonads. New Phytol 165: 317-328.
11. Germaine K, Liu X. Cabellos G, Hogan J, Ryan D, Dowling D (2006) Bacterial endophyte-enhanced phytoremediation of the organochlorine herbicide 2, 4-dichlorophenoxyacetic acid. FEMS Microbiol Ecol 57: 302-310. http://dx.doi.org/10.1111/j.1574-6941.2006.00121.x
12. Glickmann E, Dessaux Y (1995) A critical examination of the specificity of the specificity of the Salkowski reagent for indolic compounds produced by phytopathogenic pathogenic bacteria. Appl Environ Microbiol 61: 793-796.
13. Gordon SA, Weber RP (1950) Colorimetric estimation of indole acetic acid. Plant Physiol 26: 192-195.
14. Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in agricultural crops. Can J Microbiol 43: 895-914.
15. Hameeda B, Harini G, Rupela OP, Wani SP, Reddy G (2008) Growth promotion of maizeby phosphate-solubilizing bacteria isolated from composts and macrofauna. Microbiol Res 163: 234-242.
16. Hardoim PR, van Overbeek LS, van Elsas JD (2008) Properties of bacterial endophytes and their proposed role in plant growth. Trends Microbiol 16: 463-471.
17. ImpulilittiA, Malvick D (2013) Fungal endophyte diversity in soybean. J Appl Microbiol 114: 1500-1506. http://dx.doi.org/10.1111/jam.12164.
18. Jalgaonwala RE, Mohite BV, Mahajan RT (2010) Evaluation of endophytes for their antimicrobial activity from indigenous medicinal plants belonging to North Maharashtra region India. Int J Pharmaceut Biomed Res 1: 136-141.
19. Jasim B, Joseph AA, John CJ. Mathew J, Radhakrishnan EK (2014) Isolation and characterization of plant growth promoting endophytic bacteria from the rhizome of Zingiber officinale. Biotech 4: 97-204. http://dx.doi.org/10.1007/s13205-013-0143-3.
20. Karnwal A (2009) Production of indole acetic acid by fluorescent Pseudomonas in the presence of L-tryptophan and rice root exudates. J Plant Pathol 91: 61-63.
21. Kasana R, Salwan R, Dhar H, Dutt S, Gulati A (2008) A rapid and easy method for the detection of microbial cellulases on agar plates using gram's iodine. Curr Microbiol 57: 503-507.
22. Kobayashi DY, Palumbo JD (2000) Bacterial endophytes and their effects on plants and uses in agriculture. In Microbial endophytes. Bacon CW, White JF, eds, pp 199-236. Dekker, New York.
23. Krechel A, Faupel A, Hallmann J, Ulrich A, Berg G (2002) Potato-associated bacteria and their antagonistic potential towards plant-pathogenic fungi and the plant-parasitic nematode Meloidogyne incognita (Kofoid & White). Can J Microbiol 48: 772-786.
24. Larran S, Perello A, Simó M, Moreno V (2002) Isolation and analysis of endophytic microorganisms in wheat (Triticumae stivum L.) leaves. World J Microbiol Biotechnol 18: 683-686.
25. Lodewyckx C, Vangronsveld J, Porteous F, Moore ERB, Taghavi S, Mezgeay M, van der Lelie D (2002) Endophytic bacteria and their potential applications. Crit Rev Plant Sci 21: 583-606. http://dx.doi.org/10.1080/0735-260291044377.
26. McInroy J, Kloepper J (1995) Survey of indigenous bacterial endophytes from cotton and sweet corn. Plant and Soil 73: 337-342. http://dx.doi.org/10.1007/BF00011472.
27. Mehta S, Nautiyal SC (2001) An efficient method for qualitative screening ofphosphate-solubilizing bacteria. Cur Microbiol 43: 51-6. http://dx.doi.org/10.1007/s002840010259.
28. Mikolasch A, Omirbekova A, Schumann P, Reinhard A, Sheikhany H, Berzhanova R, Mukasheva T, Schauer F (2015) Enrichment of aliphatic, alicyclic and aromatic acids by oil-degrading bacteria isolated from the rhizosphere of plants growing in oil-contaminated soil from Kazakhstan. Appl Microbiol Biotechnol 99: 4071-4084. http://dx.doi.org/10.1007/s00253-014-6320-4.
29. Misaghi I, Donndelinger C (1990) Endophytic bacteria in symptom-free cotton plants. Phytopathology 80: 808-811.http://dx.doi.org/10.1094/Phyto-80-808.
30. Okon Y, Labandera-González C (1994) Agronomic applications of Azospirillum: an evaluation of 20 years of worldwide field inoculation. Soil Biol Biochem 26: 1591-1601. http://dx.doi.org/10.1016/0038-0717(94)90311-.
31. Okunishi S, Sako K, Mano H, Imamura A, Morisaki H (2005) Bacterial flora of endophytes in the maturing seeds of cultivated rice (Oryza sativa). Microbes Environ 20: 168-177. http://dx.doi.org/10.1264/jsme2.20.168.
32. Netrusov AI, Egorova MA (2005) Microbiology Workshop Handbook. Moscow: Academy
33. Pérez-García A, Romero D, de Vicente A. (2011) Plant protection and growth stimulation by microorganisms: biotechnological application of Bacilli in agriculture. Curr Opin Biotechnol 22: 1-7.
34. Plassard C, Dell B (2010) Phosphorus nutrition of mycorrhizal trees. Tree Physiol 30: 1129. http://dx.doi.org/10.1093/treephys/tpq063.
35. Rennie R, Freitas J, Ruschel A, Vose P (1982) Isolation and identification of N2-fixing bacteria associated with sugarcane (Saccharum sp.). Can J Microbiol 28: 462-467.
36. Rijavec T, Lapanje A, Rupnik M (2007) Isolation of bacterial endophytes from germinated maize kernels. Can J Microbiol 53: 802-808. http://dx.doi.org/10.1139/W07-048.
37. Rodriguez H, Fraga R (1999) Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnol Adv 17: 319-39. http://dx.doi.org/10.1016/S0734-9750(99)00014-2.
38. Rosenblueth M, Martinez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant Microbe Interact 19: 827-837. http://dx.doi.org/10.1094/MPMI-19-0827.
39. Ruby EJ, Raghunath TM (2011) A Review: Bacterial endophytes and their bioprospecting. J Pharmacy Res 4: 795-799.
40. Ryan R, Germaine K, Franks A, Ryan D, Dowling D (2008) Bacterial endophytes: recent developments and applications. FEMS Microbiol Lett 278: 1-9. http://dx.doi.org/10.1111/j.1574-6968.2007.00918.x.
41. Schulz B, Boyle C (2006) What are endophytes? In Microbial Root Endophytes, Boyle C, Sieber T eds, pp 1-13. http://dx.doi.org/10.1007/3-540-33526-91.
42. Strobel G, Daisy B, Castillo U, Harper J (2004) Natural products from endophytic microorganisms. J Nat Prod 67: 257-268. http://dx.doi.org/10.1021/np030397v.
43. Sturz A, Christie B, Matheson B (1998) Associations of bacterial endophyte populations from red clover and potato crops with potential foe beneficial allelopathy. Can J Microbiol 44: 162-167.
44. Sun F, Qiu X, Zhang X, Dai X, Dong X, Song W (2008) Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis. Microbial Ecology 55: 415-424.
45. Szilagyi-Zecchin V, Ikeda A, Hungria M, Adamoski D, Kava-Cordeiro V, Glienke C, Galli-Terasawa L (2014) Identification and characterization of endophytic bacteria from corn (Zea mays L.) roots with biotechnological potential in agriculture. AMB Express 4: 2-9. http://dx.doi.org/10.1186/s13568-014-0026-y.
46. ThakuriaD, Talukdar NC, Goswami C, Hazarika S, Boro RC, Khan MR (2004) Characterization and screening of bacteria from rhizosphere of rice grown in acidic soils of Assam. Curr Sci 86: 978-985.
47. Weller DM (1998) Biological control of soilborne plant pathogens in the rhizosphere with bacteria. Ann Rev Phytopathol 26: 379-407. http://dx.doi.org/10.1146/annurev.py.26.090188.002115.
48. Zinniel DK, Lambrecht P, Harris NB, Feng Z, Kuczmarski D, Higley P, Ishimaru CA, Arunakumari A, Barletta RG, Vidaver AK (2002) Isolation and characterization of endophytic colonizing bacteria from agronomic crops and prairie plants. Appl Environ Microbiol 68: 2198-2208). http://dx.doi.org/10.1128/AEM.68.5.2198-2208.2002.